Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_2, section s37.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4439.35 35733.50
2. MT-ATP6 MT-ATP6 4059.95 32679.61
3. MT-ND5 MT-ND5 3089.42 24867.56
4. EEF1A EEF1A 2484.75 20000.41
5. MT-CYB MT-CYB 2401.76 19332.40
6. MT-CO1 MT-CO1 2210.36 17791.77
7. MT-ND4 MT-ND4 2061.31 16592.03
8. gga-mir-3527 gga-mir-3527 1910.56 15378.60
9. MT-ND1 MT-ND1 1685.29 13565.34
10. gga-mir-3533 ENSGALG00000027736 1626.01 13088.18 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
11. MT-ND3 MT-ND3 1307.59 10525.14
12. GAPDH ENSGALG00000014442 1295.73 10429.67 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. ENSGALG00000018384 ENSGALG00000018384 1133.13 9120.86
14. NME2 ENSGALG00000002932 838.41 6748.58 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
15. MDK ENSGALG00000008367 724.93 5835.15 midkine [Source:NCBI gene;Acc:423196]
16. PPIA ENSGALG00000028600 718.16 5780.66 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
17. TMSB4X ENSGALG00000026383 608.06 4894.44 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
18. RPL8 ENSGALG00000016232 602.98 4853.55 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
19. RPL5 ENSGALG00000005922 596.20 4798.97 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
20. RPS3 ENSGALG00000017330 587.74 4730.87 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
21. RPL26 RPL26 540.31 4349.10
22. RPL7 ENSGALG00000035252 533.54 4294.60 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
23. RPL27A ENSGALG00000005948 496.27 3994.61 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
24. RPL31 ENSGALG00000016775 457.32 3681.09 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
25. CIRBP ENSGALG00000030918 447.15 3599.23 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
26. RPS6 ENSGALG00000015082 447.15 3599.23 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
27. ENO1 ENSGALG00000002377 426.83 3435.67 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
28. RPL7A ENSGALG00000003197 416.67 3353.89 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
29. STMN1 ENSGALG00000001475 409.89 3299.31 stathmin 1 [Source:NCBI gene;Acc:396057]
30. RPS4 RPS4 408.20 3285.71
31. RPS23 ENSGALG00000015617 406.50 3272.03 ribosomal protein S23
32. RPS7 ENSGALG00000016392 406.50 3272.03 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
33. EIF4G2 ENSGALG00000005587 404.81 3258.42 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
34. RPL21 ENSGALG00000027035 394.65 3176.64 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
35. RPS10 ENSGALG00000002813 391.26 3149.36 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
36. RPL15 ENSGALG00000011290 377.71 3040.29 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
37. RPS20 ENSGALG00000014432 377.71 3040.29 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
38. MT-ND2 MT-ND2 360.77 2903.93
39. RPS24 ENSGALG00000004871 355.69 2863.04 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
40. RPL23 ENSGALG00000001634 340.45 2740.37 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
41. RPSA 331.98 2672.19 ribosomal protein SA
42. H3-IX H3-IX 330.28 2658.51
43. SLC25A6_1 ENSGALG00000016691 321.82 2590.41 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
44. RPS15A ENSGALG00000006771 320.12 2576.73 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
45. RPL27 ENSGALG00000002837 316.73 2549.44 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
46. RPS11 ENSGALG00000017299 311.65 2508.55 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
47. RPS16 ENSGALG00000026490 311.65 2508.55 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
48. RPS27A ENSGALG00000036790 308.26 2481.27 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
49. RPL32 ENSGALG00000027142 301.49 2426.77 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
50. RAN ENSGALG00000002569 293.02 2358.60 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
51. ENSGALG00000018386 ENSGALG00000018386 287.94 2317.71
52. RPS3A ENSGALG00000010077 284.55 2290.42 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
53. ENSGALG00000028992 ENSGALG00000028992 281.16 2263.13
54. RPL13 ENSGALG00000006179 281.16 2263.13 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
55. EEF1B2 ENSGALG00000008590 279.47 2249.53 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
56. HMGN5 ENSGALG00000007131 269.31 2167.75 high mobility group nucleosome binding domain 5, transcript variant X1
57. ALDH1A2 ENSGALG00000004270 267.61 2154.06 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
58. ATP6V0C ENSGALG00000009229 264.23 2126.86 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
59. CNN3 ENSGALG00000005597 264.23 2126.86 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
60. RPL14 ENSGALG00000043379 264.23 2126.86 ribosomal protein L14
61. CRHOA CRHOA 250.68 2017.79
62. RPS29 ENSGALG00000012229 245.60 1976.90 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
63. RPL18A 242.21 1949.61 ribosomal protein L18a
64. RPS12 ENSGALG00000013990 238.82 1922.33 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
65. ENSGALG00000002696 ENSGALG00000002696 226.96 1826.86
66. RPL23A ENSGALG00000003966 226.96 1826.86 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
67. RPS15 ENSGALG00000015195 225.27 1813.26 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
68. BTF3L4 ENSGALG00000010570 223.58 1799.65 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
69. H2AFZ ENSGALG00000014023 221.88 1785.97 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
70. CALM CALM 218.50 1758.76
71. KPNA2 ENSGALG00000003584 215.11 1731.48 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
72. SNRPG ENSGALG00000028409 215.11 1731.48 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
73. RPL10A ENSGALG00000002644 211.72 1704.19 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
74. RPL4 ENSGALG00000007711 210.03 1690.59 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
75. TPT1 ENSGALG00000028872 210.03 1690.59 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
76. RPL36 ENSGALG00000000474 208.33 1676.90 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
77. ATP5G3 206.64 1663.30 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
78. LDHB ENSGALG00000035836 206.64 1663.30 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
79. RPL3 ENSGALG00000012172 204.95 1649.70 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
80. RPL6 ENSGALG00000004818 204.95 1649.70 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
81. RPS8 ENSGALG00000010124 204.95 1649.70 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
82. MEIS2 ENSGALG00000039118 203.25 1636.01 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
83. CDK1 ENSGALG00000003085 201.56 1622.41 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
84. HNRNPDL ENSGALG00000023199 196.48 1581.52 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
85. RPS14 ENSGALG00000004588 196.48 1581.52 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
86. RPL35A ENSGALG00000007611, ENSGALG00000041230 194.78 1567.84 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
87. RPL38 ENSGALG00000001465 191.40 1540.63 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
88. DDX5 ENSGALG00000003532 188.01 1513.34 DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
89. PRDX1 ENSGALG00000010243 182.93 1472.45 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
90. RPL36AL ENSGALG00000004952 182.93 1472.45 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
91. TCEB3 ENSGALG00000034625 179.54 1445.16 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
92. RPLP1 ENSGALG00000030878 177.85 1431.56 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
93. FKBP4 ENSGALG00000014331 176.15 1417.88 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
94. RPL35 ENSGALG00000035677 174.46 1404.27 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
95. RPL9 ENSGALG00000000150 174.46 1404.27 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
96. RPLP2 ENSGALG00000034811 172.76 1390.59 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
97. HMGB1 ENSGALG00000042875 169.38 1363.38 high mobility group box 1 [Source:NCBI gene;Acc:395724]
98. NDUFB9 ENSGALG00000042242 169.38 1363.38 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
99. HMGN2 HMGN2 162.60 1308.81
100. YWHAZ ENSGALG00000031387 160.91 1295.21 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA