Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_anterior_slice_2, section s23.

Sample reads: 124,244. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 3786.79 30482.03
2. MT-ND5 MT-ND5 3533.50 28443.15
3. MT-CO3 MT-CO3 3431.49 27622.01
4. EEF1A EEF1A 2108.87 16975.49
5. MT-CYB MT-CYB 2035.52 16385.06
6. gga-mir-3533 ENSGALG00000027736 2026.35 16311.24 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
7. gga-mir-3527 gga-mir-3527 1724.92 13884.86
8. MT-CO1 MT-CO1 1661.88 13377.42
9. MT-ND1 MT-ND1 1613.74 12989.91
10. MT-ND4 MT-ND4 1493.40 12021.23
11. NME2 ENSGALG00000002932 1040.68 8377.03 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
12. GAPDH ENSGALG00000014442 993.69 7998.78 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. ENSGALG00000018384 ENSGALG00000018384 979.94 7888.09
14. MT-ND3 MT-ND3 876.78 7057.70
15. PPIA ENSGALG00000028600 864.18 6956.28 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
16. TMSB4X ENSGALG00000026383 742.69 5978.33 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
17. RPL5 ENSGALG00000005922 626.93 5046.52 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
18. RPL8 ENSGALG00000016232 560.45 4511.38 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
19. MDK ENSGALG00000008367 522.63 4206.95 midkine [Source:NCBI gene;Acc:423196]
20. RPL26 RPL26 498.56 4013.19
21. RPL7 ENSGALG00000035252 461.89 3718.02 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
22. RPS3 ENSGALG00000017330 461.89 3718.02 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
23. RPL15 ENSGALG00000011290 455.01 3662.63 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
24. RPS7 ENSGALG00000016392 435.53 3505.83 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
25. CIRBP ENSGALG00000030918 432.09 3478.14 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
26. STMN1 ENSGALG00000001475 428.65 3450.45 stathmin 1 [Source:NCBI gene;Acc:396057]
27. EIF4G2 ENSGALG00000005587 418.34 3367.46 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
28. RPL7A ENSGALG00000003197 410.31 3302.82 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
29. RPL27A ENSGALG00000005948 409.17 3293.64 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
30. RPS27A ENSGALG00000036790 408.02 3284.38 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
31. RPS6 ENSGALG00000015082 406.87 3275.13 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
32. RPS20 ENSGALG00000014432 374.78 3016.82 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
33. RPS10 ENSGALG00000002813 371.34 2989.13 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
34. MT-ND2 MT-ND2 370.20 2979.95
35. RAN ENSGALG00000002569 366.76 2952.26 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
36. RPL31 ENSGALG00000016775 357.59 2878.45 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
37. RPS4 RPS4 357.59 2878.45
38. RPL21 ENSGALG00000027035 355.30 2860.01 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
39. RPS23 ENSGALG00000015617 347.28 2795.45 ribosomal protein S23
40. H3-IX H3-IX 343.84 2767.76
41. RPS24 ENSGALG00000004871 334.67 2693.95 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
42. ATP6V0C ENSGALG00000009229 326.65 2629.39 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
43. ENO1 ENSGALG00000002377 325.50 2620.13 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
44. RPL23 ENSGALG00000001634 320.91 2583.19 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
45. RPL14 ENSGALG00000043379 316.33 2546.32 ribosomal protein L14
46. RPS15A ENSGALG00000006771 314.04 2527.89 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
47. RPL27 ENSGALG00000002837 310.60 2500.20 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
48. HMGN5 ENSGALG00000007131 306.01 2463.25 high mobility group nucleosome binding domain 5, transcript variant X1
49. RPS11 ENSGALG00000017299 303.72 2444.81 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
50. SLC25A6_1 ENSGALG00000016691 299.14 2407.95 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
51. EEF1B2 ENSGALG00000008590 291.12 2343.39 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
52. RPS29 ENSGALG00000012229 291.12 2343.39 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
53. RPSA 285.38 2297.19 ribosomal protein SA
54. RPS16 ENSGALG00000026490 278.51 2241.89 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. RPL4 ENSGALG00000007711 277.36 2232.63 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
56. RPLP1 ENSGALG00000030878 272.78 2195.76 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
57. RPL23A ENSGALG00000003966 271.63 2186.50 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
58. RPL18A 269.34 2168.07 ribosomal protein L18a
59. ATP5G3 260.17 2094.26 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
60. RPL32 ENSGALG00000027142 256.73 2066.57 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
61. SNRPG ENSGALG00000028409 256.73 2066.57 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
62. EIF1 ENSGALG00000028517 241.83 1946.63 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
63. ENSGALG00000018386 ENSGALG00000018386 240.69 1937.45
64. RPL6 ENSGALG00000004818 240.69 1937.45 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
65. RPL36 ENSGALG00000000474 237.25 1909.76 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
66. ENSGALG00000028992 ENSGALG00000028992 236.10 1900.50
67. LDHB ENSGALG00000035836 233.81 1882.07 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
68. H2AFZ ENSGALG00000014023 232.66 1872.81 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
69. RPS12 ENSGALG00000013990 229.22 1845.12 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
70. RPS15 ENSGALG00000015195 218.91 1762.13 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
71. TPT1 ENSGALG00000028872 218.91 1762.13 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
72. CRHOA CRHOA 217.76 1752.87
73. FKBP4 ENSGALG00000014331 216.62 1743.70 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
74. RPL10A ENSGALG00000002644 212.03 1706.75 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
75. RPS3A ENSGALG00000010077 210.89 1697.57 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
76. RPLP2 ENSGALG00000034811 202.86 1632.94 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
77. BTF3L4 ENSGALG00000010570 199.43 1605.33 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
78. HNRNPDL ENSGALG00000023199 199.43 1605.33 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
79. ENSGALG00000002696 ENSGALG00000002696 198.28 1596.07
80. HSPA8 ENSGALG00000006512 195.99 1577.63 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
81. ANP32B ENSGALG00000037483 194.84 1568.38 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
82. HMGN2 HMGN2 193.69 1559.12
83. MEIS2 ENSGALG00000039118 193.69 1559.12 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
84. RPS14 ENSGALG00000004588 193.69 1559.12 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
85. RPL38 ENSGALG00000001465 192.55 1549.94 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
86. EIF4EBP1 ENSGALG00000003205 189.11 1522.25 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
87. YWHAZ ENSGALG00000031387 189.11 1522.25 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
88. NONO ENSGALG00000005507 186.82 1503.82 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
89. HMGB2 ENSGALG00000010745 185.67 1494.56 high mobility group box 2 [Source:NCBI gene;Acc:396482]
90. PRDX1 ENSGALG00000010243 184.53 1485.39 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
91. CDK1 ENSGALG00000003085 183.38 1476.13 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
92. RPL12 ENSGALG00000008806 183.38 1476.13 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
93. RPL3 ENSGALG00000012172 182.23 1466.87 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
94. HMGB1 ENSGALG00000042875 181.09 1457.70 high mobility group box 1 [Source:NCBI gene;Acc:395724]
95. CALM CALM 178.80 1439.26
96. RPL9 ENSGALG00000000150 178.80 1439.26 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
97. SNRPE ENSGALG00000000137 178.80 1439.26 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
98. KPNA2 ENSGALG00000003584 177.65 1430.01 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
99. RPL13 ENSGALG00000006179 177.65 1430.01 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
100. CNN3 ENSGALG00000005597 173.06 1393.06 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA