Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E4_anterior_slice_1, section s27.

Sample reads: 151,931. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 3935.10 25904.09
2. ENSGALG00000018384 ENSGALG00000018384 2459.44 16190.08
3. MT-ATP6 MT-ATP6 2022.64 13314.70
4. EEF1A EEF1A 1782.60 11734.55
5. RPLP1 ENSGALG00000030878 1536.66 10115.57 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
6. RPS23 ENSGALG00000015617 1360.56 8956.34 ribosomal protein S23
7. gga-mir-3527 gga-mir-3527 1359.58 8949.88
8. RPS10 ENSGALG00000002813 1206.11 7939.62 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
9. RPLP0 ENSGALG00000023294 1078.22 7097.74 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
10. RPL35A ENSGALG00000007611, ENSGALG00000041230 1047.72 6896.96 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
11. MT-ND5 MT-ND5 1035.92 6819.29
12. RPS6 ENSGALG00000015082 1017.22 6696.19 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
13. MT-CYB MT-CYB 1008.37 6637.93
14. MT-CO1 MT-CO1 959.18 6314.12
15. RPS12 ENSGALG00000013990 954.26 6281.73 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
16. GAPDH ENSGALG00000014442 937.54 6171.67 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
17. RPS29 ENSGALG00000012229 901.14 5932.05 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
18. RPL32 ENSGALG00000027142 867.69 5711.86 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
19. RPS8 ENSGALG00000010124 848.01 5582.31 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
20. RPSA 841.13 5537.02 ribosomal protein SA
21. RPL27A ENSGALG00000005948 814.57 5362.18 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
22. RPL19 ENSGALG00000001658 802.76 5284.43 ribosomal protein L19 [Source:NCBI gene;Acc:420003]
23. ENSGALG00000018386 ENSGALG00000018386 799.81 5265.01
24. RPL27 ENSGALG00000002837 797.84 5252.05 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
25. gga-mir-3533 ENSGALG00000027736 797.84 5252.05 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
26. RPL8 ENSGALG00000016232 794.89 5232.63 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
27. RPS3A ENSGALG00000010077 767.34 5051.27 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
28. RPL26 RPL26 754.56 4967.14
29. RPS15 ENSGALG00000015195 752.59 4954.17 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
30. RPS11 ENSGALG00000017299 728.98 4798.75 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
31. RPS4 RPS4 724.06 4766.36
32. RPL4 ENSGALG00000007711 710.29 4675.72 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
33. RPL23A ENSGALG00000003966 708.32 4662.75 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
34. RPS28 ENSGALG00000024398 705.37 4643.33 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
35. RPS14 ENSGALG00000004588 697.50 4591.52 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
36. RPS21 ENSGALG00000005338 695.53 4578.56 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
37. RPL29 ENSGALG00000026978 679.79 4474.94 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
38. RPL7A ENSGALG00000003197 668.97 4403.72 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
39. RPS2 ENSGALG00000005490 656.18 4319.52 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
40. MT-ND3 MT-ND3 650.28 4280.68
41. RPL12 ENSGALG00000008806 640.44 4215.91 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
42. RPLP2 ENSGALG00000034811 627.65 4131.71 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
43. RPS27A ENSGALG00000036790 624.70 4112.29 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
44. RPL38 ENSGALG00000001465 617.81 4066.94 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
45. RPL36AL ENSGALG00000004952 605.02 3982.74 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
46. MDK ENSGALG00000008367 584.36 3846.74 midkine [Source:NCBI gene;Acc:423196]
47. PPIA ENSGALG00000028600 582.40 3833.84 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
48. MT-ND1 MT-ND1 571.57 3762.55
49. RPS20 ENSGALG00000014432 570.59 3756.10 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
50. RPL24 ENSGALG00000015339 566.65 3730.16 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
51. RPL13 ENSGALG00000006179 564.69 3717.26 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
52. ENSGALG00000002696 ENSGALG00000002696 559.77 3684.87
53. GNB2L1 ENSGALG00000000122 544.03 3581.26 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
54. RPL35 ENSGALG00000035677 537.14 3535.90 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
55. RPS16 ENSGALG00000026490 530.25 3490.55 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
56. ENSGALG00000028992 ENSGALG00000028992 525.34 3458.22
57. MT-ND4 MT-ND4 523.37 3445.26
58. RPL23 ENSGALG00000001634 522.38 3438.74 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
59. RPL15 ENSGALG00000011290 521.40 3432.29 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
60. RPS13 ENSGALG00000006096 518.45 3412.87 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
61. RPL5 ENSGALG00000005922 515.50 3393.45 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
62. MT-ND6 MT-ND6 509.60 3354.61
63. RPS15A ENSGALG00000006771 502.71 3309.25 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
64. RPL21 ENSGALG00000027035 492.87 3244.48 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
65. RPL18A 485.00 3192.67 ribosomal protein L18a
66. RPL14 ENSGALG00000043379 480.08 3160.28 ribosomal protein L14
67. RPS7 ENSGALG00000016392 478.11 3147.32 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
68. GAL10 GAL10 477.13 3140.87
69. RPL6 ENSGALG00000004818 477.13 3140.87 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
70. NME2 ENSGALG00000002932 474.18 3121.45 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
71. RPS25 ENSGALG00000007699 470.24 3095.51 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
72. RPL37 ENSGALG00000014833 425.97 2804.09 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
73. TMSB4X ENSGALG00000026383 415.15 2732.86 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
74. TCEB3 ENSGALG00000034625 411.22 2706.99 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
75. HBZ ENSGALG00000023740 410.23 2700.47 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
76. RPL7 ENSGALG00000035252 395.48 2603.38 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
77. RPL3 ENSGALG00000012172 388.59 2558.02 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
78. RPL36 ENSGALG00000000474 382.69 2519.18 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
79. EEF1D 378.75 2493.25 eukaryotic translation elongation factor 1 delta, transcript variant X13
80. HBE 376.79 2480.34 hemoglobin subunit epsilon
81. RPS17 ENSGALG00000002157 364.98 2402.60 ribosomal protein S17 [Source:NCBI gene;Acc:374053]
82. UBB ENSGALG00000004509 352.19 2318.41 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
83. STMN1 ENSGALG00000001475 343.34 2260.15 stathmin 1 [Source:NCBI gene;Acc:396057]
84. SNRPD1 ENSGALG00000041334 338.42 2227.76 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
85. RPL10A ENSGALG00000002644 327.60 2156.54 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
86. FTH FTH 324.65 2137.12
87. RPS24 ENSGALG00000004871 316.78 2085.31 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
88. CRHOA CRHOA 312.84 2059.37
89. RPS3 ENSGALG00000017330 307.92 2026.98 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
90. ANP32B ENSGALG00000037483 305.95 2014.02 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
91. HBG1 HBG1 302.02 1988.15
92. ATP5G3 301.04 1981.70 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
93. ENO1 ENSGALG00000002377 299.07 1968.73 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
94. RPL31 ENSGALG00000016775 279.39 1839.18 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
95. TPT1 ENSGALG00000028872 260.70 1716.14 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
96. TXN ENSGALG00000015704 255.78 1683.76 thioredoxin [Source:NCBI gene;Acc:396437]
97. RPL22 ENSGALG00000000719 249.88 1644.92 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
98. DYL1 ENSGALG00000007153 242.99 1599.56 dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
99. MT-ND2 MT-ND2 242.99 1599.56
100. NUCKS1 ENSGALG00000000708 242.01 1593.11 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA