Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_2, section s28.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 3853.21 31013.32
2. MT-CO3 MT-CO3 3841.93 30922.53
3. MT-ND5 MT-ND5 3189.02 25667.45
4. GAPDH ENSGALG00000014442 1901.23 15302.42 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
5. EEF1A EEF1A 1820.04 14648.95
6. MT-CYB MT-CYB 1710.66 13768.58
7. MT-ND4 MT-ND4 1446.79 11644.77
8. gga-mir-3527 gga-mir-3527 1375.74 11072.91
9. PPIA ENSGALG00000028600 1281.02 10310.54 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
10. MT-ND1 MT-ND1 1177.28 9475.57
11. gga-mir-3533 ENSGALG00000027736 1005.87 8095.94 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. NME2 ENSGALG00000002932 934.83 7524.16 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
13. ENSGALG00000018384 ENSGALG00000018384 827.70 6661.91
14. RPS23 ENSGALG00000015617 796.13 6407.81 ribosomal protein S23
15. MT-CO1 MT-CO1 758.91 6108.24
16. MT-ND3 MT-ND3 690.13 5554.65
17. ENO1 ENSGALG00000002377 660.81 5318.66 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
18. RPS6 ENSGALG00000015082 611.19 4919.28 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
19. EIF4G2 ENSGALG00000005587 570.60 4592.59 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
20. TMSB4X ENSGALG00000026383 564.96 4547.19 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
21. RPL8 ENSGALG00000016232 537.89 4329.31 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
22. RPL7 ENSGALG00000035252 531.13 4274.90 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
23. MT-ND2 MT-ND2 509.70 4102.42
24. RPL5 ENSGALG00000005922 464.60 3739.42 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
25. RPS7 ENSGALG00000016392 464.60 3739.42 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
26. STMN1 ENSGALG00000001475 444.30 3576.04 stathmin 1 [Source:NCBI gene;Acc:396057]
27. ENSGALG00000002696 ENSGALG00000002696 437.53 3521.55
28. LDHB ENSGALG00000035836 425.13 3421.74 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
29. RPL15 ENSGALG00000011290 420.62 3385.44 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
30. RPL18A 418.36 3367.25 ribosomal protein L18a
31. RAN ENSGALG00000002569 405.96 3267.45 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
32. HMGN5 ENSGALG00000007131 386.79 3113.16 high mobility group nucleosome binding domain 5, transcript variant X1
33. RPL26 RPL26 380.02 3058.67
34. CIRBP ENSGALG00000030918 377.77 3040.56 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
35. MDK ENSGALG00000008367 355.21 2858.98 midkine [Source:NCBI gene;Acc:423196]
36. RPL35A ENSGALG00000007611, ENSGALG00000041230 352.96 2840.87 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
37. RPS4 RPS4 349.57 2813.58
38. RPS27A ENSGALG00000036790 348.45 2804.57 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
39. RPL27A ENSGALG00000005948 346.19 2786.38 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
40. RPL7A ENSGALG00000003197 341.68 2750.08 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
41. RPS11 ENSGALG00000017299 330.40 2659.29 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
42. RPS16 ENSGALG00000026490 324.77 2613.97 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPS10 ENSGALG00000002813 319.13 2568.58 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
44. SLC25A6_1 ENSGALG00000016691 311.23 2505.00 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
45. RPL31 ENSGALG00000016775 308.98 2486.89 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
46. H2AFZ ENSGALG00000014023 296.57 2387.00 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
47. MIF ENSGALG00000006326 288.68 2323.50 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
48. KPNA2 ENSGALG00000003584 287.55 2314.40 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
49. RPL23 ENSGALG00000001634 281.91 2269.01 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
50. EEF1B2 ENSGALG00000008590 280.79 2259.99 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
51. H3-IX H3-IX 278.53 2241.80
52. ATP6V0C ENSGALG00000009229 271.77 2187.39 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
53. EIF1 ENSGALG00000028517 271.77 2187.39 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
54. FKBP4 ENSGALG00000014331 270.64 2178.30 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
55. RPSA 269.51 2169.20 ribosomal protein SA
56. RPS20 ENSGALG00000014432 265.00 2132.90 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
57. RPL38 ENSGALG00000001465 257.11 2069.40 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
58. RPLP1 ENSGALG00000030878 254.85 2051.21 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
59. RPL14 ENSGALG00000043379 253.72 2042.12 ribosomal protein L14
60. CRHOA CRHOA 252.60 2033.10
61. ENSGALG00000018386 ENSGALG00000018386 251.47 2024.01
62. ANP32B ENSGALG00000037483 250.34 2014.91 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
63. MT-ATP8 MT-ATP8 248.08 1996.72
64. ATP5G3 246.96 1987.71 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
65. RPS12 ENSGALG00000013990 246.96 1987.71 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
66. RPL37 ENSGALG00000014833 244.70 1969.52 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
67. RPL32 ENSGALG00000027142 243.57 1960.42 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
68. IGF2BP3 ENSGALG00000010961 241.32 1942.31 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
69. SNRPG ENSGALG00000028409 239.06 1924.12 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
70. RPS14 ENSGALG00000004588 236.81 1906.01 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
71. HSPA8 ENSGALG00000006512 226.66 1824.32 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
72. RPS24 ENSGALG00000004871 226.66 1824.32 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
73. HSPE1 ENSGALG00000009070 223.28 1797.11 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
74. RPS21 ENSGALG00000005338 223.28 1797.11 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
75. TCF12 ENSGALG00000004304 221.02 1778.92 transcription factor 12 [Source:NCBI gene;Acc:396334]
76. RPL27 ENSGALG00000002837 218.77 1760.81 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
77. RPS8 ENSGALG00000010124 218.77 1760.81 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
78. SNRPE ENSGALG00000000137 218.77 1760.81 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
79. PGK1 ENSGALG00000007936 213.13 1715.42 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
80. RPL6 ENSGALG00000004818 213.13 1715.42 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
81. HNRNPDL ENSGALG00000023199 206.36 1660.93 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
82. RPL36 ENSGALG00000000474 206.36 1660.93 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
83. RPL4 ENSGALG00000007711 206.36 1660.93 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
84. BTF3L4 ENSGALG00000010570 205.23 1651.83 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
85. RPS29 ENSGALG00000012229 204.11 1642.82 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
86. EIF5A2 ENSGALG00000009309 201.85 1624.63 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
87. CRABP-I ENSGALG00000003193 197.34 1588.33 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
88. RPL13 ENSGALG00000006179 197.34 1588.33 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
89. TXN ENSGALG00000015704 196.21 1579.23 thioredoxin [Source:NCBI gene;Acc:396437]
90. RPS15A ENSGALG00000006771 195.08 1570.14 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
91. TPT1 ENSGALG00000028872 195.08 1570.14 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
92. RPL21 ENSGALG00000027035 191.70 1542.94 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
93. RPL3 ENSGALG00000012172 191.70 1542.94 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
94. YWHAZ ENSGALG00000031387 190.57 1533.84 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
95. HSP90AA1 ENSGALG00000033212 188.32 1515.73 heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
96. RPL10A ENSGALG00000002644 188.32 1515.73 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
97. NONO ENSGALG00000005507 182.68 1470.34 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
98. HMGN2 HMGN2 181.55 1461.24
99. ENSGALG00000028992 ENSGALG00000028992 178.17 1434.04
100. NDUFB9 ENSGALG00000042242 177.04 1424.94 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA