Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vrtn

Gene Name Gene ID Reads Annotation
vrtn ENSDARG00000061963, ENSDARG00000115943 42 vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]










Genes with expression patterns similar to vrtn

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vrtn ENSDARG00000061963, ENSDARG00000115943 42 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
2. gucy1b3 92 2.802 1.000 1.000 - - - - 0.802 - - guanylate cyclase 1, soluble, beta 3
3. cdk20 ENSDARG00000003867 27 2.705 0.705 1.000 - - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
4. zeb2b ENSDARG00000078416 23 2 - 1.000 - - - - 1.000 - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
5. SCAMP5 SCAMP5 19 2 - 1.000 - - - - 1.000 - -
6. kif17 ENSDARG00000055238 12 2 - 1.000 - - - - 1.000 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
7. CLDN20 26 2 - 1.000 - - - - 1.000 - - claudin 20, transcript variant X2
8. zgc:110434 21 2 - 1.000 - - - - 1.000 - - zgc:110434
9. pax4 ENSDARG00000021336 29 1.957 - - 0.957 - - - 1.000 - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
10. si:dkey-220a11.9 si:dkey-220a11.9 10 1.933 - 1.000 - - - - - 0.933 -
11. zgc:114041 ENSDARG00000052109 76 1.922 - - 0.922 - - - 1.000 - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
12. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.904 - - 0.904 - - - 1.000 - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
13. wbscr27 wbscr27 70 1.859 - - 0.859 - - - 1.000 - -
14. NPPC ENSDARG00000068126 45 1.839 - 1.000 - - - - 0.839 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
15. KCNAB2 KCNAB2 129 1.822 - 1.000 - - - - 0.822 - -
16. NARS2 ENSDARG00000098441 57 1.812 0.918 - - - - - - 0.894 - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
17. cacna1ab ENSDARG00000006923 12 1.766 - 1.000 - - - - 0.766 - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
18. gpsm1a ENSDARG00000092517 784 1.742 - - 0.742 - - - 1.000 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
19. tagln3a ENSDARG00000079805 123 1.738 - 1.000 - - - - 0.738 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
20. CABZ01083834.1 CABZ01083834.1 38 1.737 - - - 0.760 - - - 0.977 -
21. zgc:110353 ENSDARG00000039443 80 1.716 - - - - - - 1.000 0.716 - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
22. hcst ENSDARG00000092074 172 1.708 - 1.000 - - - - - - 0.708 hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
23. uckl1a ENSDARG00000001686 21 1.705 0.705 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
24. BX469915.2 BX469915.2 48 1.705 0.705 1.000 - - - - - - -
25. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1.705 0.705 - - - - - 1.000 - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
26. lars2 ENSDARG00000075337 31 1.705 0.705 - - - - - 1.000 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
27. zgc:113691 ENSDARG00000038898 36 1.705 0.705 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
28. hcrt ENSDARG00000070932 4 1.705 0.705 - - - - - 1.000 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
29. CABZ01066439.2 CABZ01066439.2 5 1.705 0.705 1.000 - - - - - - -
30. rgs7 rgs7 208 1.691 - 0.946 - - - - - 0.745 -
31. ENSDARG00000086878 ENSDARG00000086878 332 1.679 0.781 0.898 - - - - - - -
32. SLC36A4 ENSDARG00000039661 175 1.672 - 0.877 0.795 - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
33. spon2b ENSDARG00000002732 115 1.652 - 0.806 - - - - - 0.846 - spondin 2b, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-161]
34. MDH1B ENSDARG00000018008 29 1.637 0.705 - - - - - - 0.932 - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
35. srxn1 ENSDARG00000079160 265 1.604 - - 0.896 - - - - 0.708 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
36. bco2b ENSDARG00000041715 13 1.594 0.705 0.889 - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
37. GMIP ENSDARG00000077249 43 1.587 0.705 - - - - - - 0.882 - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
38. fank1 ENSDARG00000039657 9 1.569 0.705 - - - - - - - 0.864 fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
39. neurod neurod 1189 1.564 - 0.816 - - - - 0.748 - -
40. shdb ENSDARG00000062109, ENSDARG00000111006 323 1.507 - 0.767 0.740 - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
41. dtnbb ENSDARG00000013020 280 1.504 - 0.756 - - - - - 0.748 - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
42. si:ch211-57m13.15 si:ch211-57m13.15 206 1.467 - - 0.744 - - - - 0.723 -
43. ccdc113 ENSDARG00000006981 67 1.43 - 0.707 - - 0.723 - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
44. pcdh2ac ENSDARG00000099783 325 1.429 - 0.710 - - - - 0.719 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
45. CABZ01061549.1 CABZ01061549.1 17 1.409 0.705 0.704 - - - - - - -
46. CR769772.1 ENSDARG00000092772 0 1 - 1.000 - - - - - - -
47. C6H3orf67 C6H3orf67 1 1 - 1.000 - - - - - - -
48. tg ENSDARG00000020084 40 1 - - - - - - 1.000 - - thyroglobulin [Source:ZFIN;Acc:ZDB-GENE-030519-1]
49. CABZ01054405.1 CABZ01054405.1 115 1 - 1.000 - - - - - - -
50. def6b ENSDARG00000044524 99 1 - 1.000 - - - - - - - differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
51. yjefn3 ENSDARG00000061692 211 1 - 1.000 - - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
52. GMEB2 ENSDARG00000093240 6 1 - 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
53. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
54. si:ch211-122l24.4 si:ch211-122l24.4 41 1 - 1.000 - - - - - - -
55. brinp3b ENSDARG00000075352 14 1 - - - - - - 1.000 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
56. neflb ENSDARG00000012426 298 1 - 1.000 - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
57. rims3 ENSDARG00000062305 202 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
58. ttc6 ENSDARG00000104125 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
59. porcn ENSDARG00000052558, ENSDARG00000111556 110 1 - 1.000 - - - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
60. CABZ01041769.1 CABZ01041769.1 17 1 - 1.000 - - - - - - -
61. SIMC1 SIMC1 103 1 - - - - - - 1.000 - -
62. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
63. CAMSAP2 CAMSAP2 109 1 - - - - - - 1.000 - -
64. nkiras2_1 ENSDARG00000052594 31 1 - 1.000 - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
65. FYB FYB 3 1 - - - - - - 1.000 - -
66. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
67. zgc:153345 ENSDARG00000055622 29 1 - - - - - - 1.000 - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
68. pappab ENSDARG00000059858 11 1 - - - - - - 1.000 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
69. U1_20 U1_20 0 1 - - - - - - 1.000 - -
70. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1 - - - - - - 1.000 - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
71. cant1b ENSDARG00000102977 1 1 - 1.000 - - - - - - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
72. ENSDARG00000091766 ENSDARG00000091766 15 1 - - - - - - 1.000 - -
73. XRCC2 ENSDARG00000013933 15 1 - 1.000 - - - - - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
74. sdhaf1 ENSDARG00000092478 51 1 - 1.000 - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
75. her3 ENSDARG00000076857 131 1 - 1.000 - - - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
76. cdh10 cdh10 38 1 - 1.000 - - - - - - -
77. si:ch211-138k19.2 si:ch211-138k19.2 398 1 - 1.000 - - - - - - -
78. tmem179b ENSDARG00000069495 17 1 - - - - - - 1.000 - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
79. CABZ01077140.1 CABZ01077140.1 2 1 - - - - - - 1.000 - -
80. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
81. ifit2 ifit2 11 1 - 1.000 - - - - - - -
82. CR847847.1 CR847847.1 0 1 - - - - - - 1.000 - -
83. FP074874.2 ENSDARG00000105724 107 1 - 1.000 - - - - - - -
84. CR450793.1 ENSDARG00000088927 6 1 - - - - - - 1.000 - - zinc finger protein 436-like [Source:NCBI gene;Acc:103911751]
85. si:dkey-150k17.2 si:dkey-150k17.2 40 1 - - - - - - 1.000 - -
86. si:ch211-229c8.4 ENSDARG00000056154 1 1 - - - - - - 1.000 - - si:ch211-229c8.4 [Source:ZFIN;Acc:ZDB-GENE-050419-129]
87. CU179703.1 CU179703.1 5 1 - 1.000 - - - - - - -
88. ei24 ENSDARG00000053840 78 1 - - - - - - 1.000 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
89. dusp3b ENSDARG00000060130 3 1 - - - - - - 1.000 - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
90. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - 1.000 - -
91. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
92. CT025910.1 CT025910.1 143 1 - 1.000 - - - - - - -
93. PDE9A ENSDARG00000060280 58 1 - - - - - - 1.000 - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
94. CR388095.2 ENSDARG00000117604 76 1 - 1.000 - - - - - - -
95. CABZ01086828.1 CABZ01086828.1 1 1 - 1.000 - - - - - - -
96. CU571323.1 CU571323.1 7 1 - 1.000 - - - - - - -
97. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 - - - - - - 1.000 - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
98. MCF2L2 ENSDARG00000079742 52 1 - 1.000 - - - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
99. FCF1 ENSDARG00000102333 59 1 - - - - - - 1.000 - - FCF1 rRNA-processing protein [Source:ZFIN;Acc:ZDB-GENE-050417-67]
100. sst3 61 1 - - - - - - 1.000 - - somatostatin 3

There are 1206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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