Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-7l19.6

Gene Name Gene ID Reads Annotation
si:rp71-7l19.6 si:rp71-7l19.6 12










Genes with expression patterns similar to si:rp71-7l19.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-7l19.6 si:rp71-7l19.6 12 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. PEG3_35 PEG3_35 52 2.711 0.958 - - - 0.753 - 1.000 - -
3. elmod3 ENSDARG00000074742 6 2 - - - 1.000 - - 1.000 - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
4. myo5b_1 ENSDARG00000062003 6 2 1.000 - - - - - 1.000 - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
5. mamdc2a ENSDARG00000098345 21 2 1.000 - - 1.000 - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
6. pappab ENSDARG00000059858 11 2 - - - 1.000 - - 1.000 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
7. ghrh ENSDARG00000069481, ENSDARG00000111551 9 2 - - 1.000 1.000 - - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
8. CDR2_1 CDR2_1 8 2 - - - 1.000 - - - - 1.000
9. si:busm1-180g5.7 si:busm1-180g5.7 15 2 1.000 - - 1.000 - - - - -
10. ARAP1 3 2 1.000 - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
11. CR339051.1 CR339051.1 9 2 1.000 - - - - - 1.000 - -
12. PDE6H 3 1.994 - - - - 0.994 - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
13. CNGB3 CNGB3 7 1.987 - - - - 0.987 - - - 1.000
14. si:ch73-341k19.1 ENSDARG00000095946 5 1.958 0.958 - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
15. gbgt1l1 ENSDARG00000025275 21 1.957 1.000 0.957 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
16. si:dkey-96l17.6 ENSDARG00000094540 4 1.956 - 0.956 - - - - 1.000 - - si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
17. si:dkey-82i20.3 si:dkey-82i20.3 6 1.953 - - - - 0.953 - - - 1.000
18. slc35c1 ENSDARG00000104669 65 1.935 - 0.935 - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
19. lmbrd2a ENSDARG00000099566 15 1.925 0.925 - - 1.000 - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
20. pcdh2ab7 7 1.916 - - - 1.000 0.916 - - - - protocadherin 2 alpha b 7
21. dcp2_1 ENSDARG00000104242 74 1.905 - 0.905 - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
22. si:zfos-44h1.1 si:zfos-44h1.1 1 1.895 - - - 1.000 - - - 0.895 -
23. si:ch211-145h19.4 si:ch211-145h19.4 1 1.895 - - - - - - - 0.895 1.000
24. crygmxl1 ENSDARG00000018797 7 1.895 - - - 1.000 - - - 0.895 - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
25. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1.895 - - - - - - - 0.895 1.000
26. rnh1 ENSDARG00000086631 14 1.89 - 0.956 - 0.934 - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
27. CR354426.1 CR354426.1 25 1.879 1.000 - - - 0.879 - - - -
28. LRRC41 LRRC41 11 1.875 - 0.978 - - 0.897 - - - -
29. CAPN2 CAPN2 1497 1.858 0.902 0.956 - - - - - - -
30. CABZ01069022.1 ENSDARG00000105692 16 1.851 - 0.956 - - - - - 0.895 - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
31. ei24 ENSDARG00000053840 78 1.798 - 0.798 - - - - 1.000 - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
32. tmem168b ENSDARG00000062168 17 1.797 - - 1.000 - - - - - 0.797 transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
33. si:zfos-979f1.2 ENSDARG00000011652 24 1.796 - - - - 0.796 - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
34. npvf ENSDARG00000036227 23 1.78 - - - - - - - 0.895 0.885 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
35. baiap2l2 baiap2l2 30 1.776 - - - - 0.776 - 1.000 - -
36. GPX2 ENSDARG00000089149 10 1.764 - - 0.764 1.000 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
37. 5S_rRNA_13 5S_rRNA_13 0 1.764 - - 0.764 - - - - - 1.000
38. brinp3b ENSDARG00000075352 14 1.764 - - 0.764 - - - 1.000 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
39. clec3ba ENSDARG00000076541 3 1.764 - - 0.764 - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
40. si:dkey-13d5.1 si:dkey-13d5.1 3 1.764 1.000 - 0.764 - - - - - -
41. si:ch211-233m11.1 ENSDARG00000074653 1 1.764 - - 0.764 - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
42. NAGK ENSDARG00000099116 6 1.755 - - - 0.755 - - 1.000 - - N-acetylglucosamine kinase [Source:ZFIN;Acc:ZDB-GENE-070928-19]
43. cryba2a ENSDARG00000030349 1342 1.74 - 0.956 - - - - - 0.784 - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
44. m17 ENSDARG00000035435 28 1.728 - 0.759 - - 0.969 - - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
45. CDC42EP1 CDC42EP1 50 1.72 1.000 - - - 0.720 - - - -
46. ENSDARG00000091766 ENSDARG00000091766 15 1.712 - - 0.712 - - - 1.000 - -
47. CR847954.1 CR847954.1 127 1.711 - 0.812 - - - - - 0.899 -
48. MAP3K13 ENSDARG00000009493 8 1.711 - 0.956 - 0.755 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
49. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1.697 0.863 0.834 - - - - - - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
50. stap2a ENSDARG00000092810 591 1.676 - 0.923 - - - - 0.753 - - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
51. CR391967.1 CR391967.1 135 1.675 - - - - - - - 0.868 0.807
52. si:dkey-11d20.4 si:dkey-11d20.4 6 1.666 0.902 - 0.764 - - - - - -
53. crhr1 ENSDARG00000003989 5 1.659 - - 0.764 - - - - 0.895 - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
54. crygm2d3 ENSDARG00000088823 1560 1.659 - - - 0.853 - - - 0.806 - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
55. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1.659 - - 0.764 - - - - 0.895 - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
56. efr3ba ENSDARG00000033516 19 1.651 - 0.933 - - - - 0.718 - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
57. ptprja ENSDARG00000033042 25 1.643 - 0.935 - - 0.708 - - - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
58. cttnbp2nl cttnbp2nl 166 1.642 0.902 - - - 0.740 - - - -
59. crygmxl2 ENSDARG00000074001 282 1.64 - - - 0.830 - - - 0.810 - crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
60. trh ENSDARG00000006868 31 1.613 - - - - - - 0.766 0.847 - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
61. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1.606 - - - 0.771 - - - 0.835 - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
62. cryba2b ENSDARG00000041925 4329 1.599 - - - 0.828 - - - 0.771 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
63. sh3bgrl2 ENSDARG00000036878 282 1.591 - 0.843 - - - - 0.748 - - SH3 domain binding glutamate-rich protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040704-38]
64. rfxank ENSDARG00000016730 12 1.587 - - 0.795 0.792 - - - - - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
65. pax6l pax6l 54 1.585 - - - - - - - 0.728 0.857
66. MAP4K2 ENSDARG00000001234 39 1.569 - 0.860 0.709 - - - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
67. zgc:165347_1 zgc:165347_1 69 1.568 - - - 0.710 - - - 0.858 -
68. si:dkey-157g20.2 si:dkey-157g20.2 29 1.563 - 0.839 - - - - - 0.724 -
69. shank3a ENSDARG00000063332 5 1.556 - - 0.764 0.792 - - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
70. si:dkey-92j12.5 ENSDARG00000094677 5 1.556 - - 0.764 0.792 - - - - - si:dkey-92j12.5 [Source:ZFIN;Acc:ZDB-GENE-090313-354]
71. CABZ01079009.1 CABZ01079009.1 1 1.556 - - 0.764 0.792 - - - - -
72. rdh12l ENSDARG00000045277 139 1.541 0.808 0.733 - - - - - - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
73. atg10 ENSDARG00000104846 85 1.539 0.742 0.797 - - - - - - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
74. ZNF135_5 ZNF135_5 73 1.528 0.741 0.787 - - - - - - -
75. si:ch211-199g17.2 ENSDARG00000092310 243 1.496 0.709 0.787 - - - - - - - si:ch211-199g17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-396]
76. tsga10 ENSDARG00000052512 79 1.491 0.791 - - - - - 0.700 - - testis specific, 10 [Source:ZFIN;Acc:ZDB-GENE-061013-482]
77. skilb ENSDARG00000022904 300 1.464 0.720 0.744 - - - - - - - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
78. si:dkey-39a18.1 ENSDARG00000045669 599 1.452 0.733 0.719 - - - - - - - si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]
79. masp2 ENSDARG00000007988 331 1.438 0.713 0.725 - - - - - - - mannan-binding lectin serine peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060130-154]
80. si:ch211-106n13.3 ENSDARG00000052633 3 1 - - - - - - 1.000 - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
81. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
82. GPT GPT 2 1 - - - - - - - - 1.000
83. AKR1C1 AKR1C1 32 1 1.000 - - - - - - - -
84. PEG3_13 PEG3_13 5 1 - - - 1.000 - - - - -
85. NWD1 ENSDARG00000076110 3 1 1.000 - - - - - - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
86. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
87. foxm1 ENSDARG00000003200 8 1 - - - - - - 1.000 - - forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]
88. cpo ENSDARG00000077688 1 1 - - - 1.000 - - - - - carboxypeptidase O [Source:ZFIN;Acc:ZDB-GENE-070619-6]
89. zgc:175136 ENSDARG00000103024 4 1 - - - 1.000 - - - - - zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122]
90. znf536 ENSDARG00000103648 6 1 - - - - - - 1.000 - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
91. RIMS2 RIMS2 2 1 - - - 1.000 - - - - -
92. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
93. apoob ENSDARG00000026444, ENSDARG00000109942 4 1 - - - 1.000 - - - - - apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
94. CELA1_1 CELA1_1 104 1 - - - 1.000 - - - - -
95. zgc:174224_2 ENSDARG00000093875 22 1 1.000 - - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
96. irgq2 ENSDARG00000068657 4 1 - - - 1.000 - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
97. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - - - - 1.000
98. rcv1 rcv1 77 1 1.000 - - - - - - - -
99. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
100. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000

There are 1481 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA