Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCRT1

Gene Name Gene ID Reads Annotation
SCRT1 ENSG00000261678, ENSG00000284923 207 scratch family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:15950]



Genes with expression patterns similar to SCRT1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SCRT1 ENSG00000261678, ENSG00000284923 207 2 1.000 1.000 scratch family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:15950]
2. SCRT2 ENSG00000215397 343 1.621 0.761 0.860 scratch family transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:15952]
3. TUBB2B ENSG00000137285 35642 1.603 0.870 0.733 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
4. Sep-03 Sep-03 2608 1.567 0.834 0.733
5. DPYSL3 ENSG00000113657 7319 1.548 0.796 0.752 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
6. LINC00599 ENSG00000253230, ENSG00000284859 293 1.537 0.775 0.762 long intergenic non-protein coding RNA 599 [Source:HGNC Symbol;Acc:HGNC:27231]
7. PHF21B ENSG00000056487 2704 1.536 0.776 0.760 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
8. NCAN ENSG00000130287 1136 1.536 0.754 0.782 neurocan [Source:HGNC Symbol;Acc:HGNC:2465]
9. CRMP1 ENSG00000072832 9692 1.513 0.797 0.716 collapsin response mediator protein 1 [Source:HGNC Symbol;Acc:HGNC:2365]
10. STMN4 ENSG00000015592 748 1.499 0.772 0.727 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
11. CNTN2 ENSG00000184144 4674 1.499 0.754 0.745 contactin 2 [Source:HGNC Symbol;Acc:HGNC:2172]
12. FBXL16 ENSG00000127585 196 1.479 0.766 0.713 F-box and leucine rich repeat protein 16 [Source:HGNC Symbol;Acc:HGNC:14150]
13. TAGLN3 ENSG00000144834 10185 1.474 0.772 0.702 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
14. ST18 ENSG00000147488 547 1.472 0.738 0.734 ST18, C2H2C-type zinc finger [Source:HGNC Symbol;Acc:HGNC:18695]
15. ELAVL3 ENSG00000196361 2164 1.455 0.707 0.748 ELAV like RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3314]
16. CALCB ENSG00000175868 1967 1.45 0.726 0.724 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]
17. APC2 ENSG00000115266 1420 1.443 0.740 0.703 APC2, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:24036]
18. KIF1A ENSG00000130294 2920 1.441 0.731 0.710 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
19. DPYSL5 ENSG00000157851 6855 1.439 0.712 0.727 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
20. HOXC9 ENSG00000180806 3191 1.435 0.703 0.732 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]
21. MAP1B ENSG00000131711 44568 0.829 0.829 - microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
22. MAP2 ENSG00000078018 3573 0.821 0.821 - microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
23. POU2F2 ENSG00000028277 2245 0.808 0.808 - POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9213]
24. FAM219A ENSG00000164970 1747 0.806 0.806 - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
25. CPLX2 ENSG00000145920 573 0.804 0.804 - complexin 2 [Source:HGNC Symbol;Acc:HGNC:2310]
26. RGS16 ENSG00000143333 2239 0.8 0.800 - regulator of G protein signaling 16 [Source:HGNC Symbol;Acc:HGNC:9997]
27. TUBA1A ENSG00000167552 83799 0.793 0.793 - tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
28. CXCR4 ENSG00000121966 4708 0.793 0.793 - C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
29. ATP1A3 ENSG00000105409 428 0.793 0.793 - ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
30. SRGAP3 ENSG00000196220 5297 0.791 0.791 - SLIT-ROBO Rho GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:19744]
31. GDAP1L1 ENSG00000124194 1388 0.787 0.787 - ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
32. TUBB3 ENSG00000258947 53998 0.786 0.786 - tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
33. NRG1 ENSG00000157168 516 0.78 0.780 - neuregulin 1 [Source:HGNC Symbol;Acc:HGNC:7997]
34. KIF21B ENSG00000116852 3406 0.778 0.778 - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
35. ENO2 ENSG00000111674 2931 0.777 0.777 - enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
36. SRRM4 ENSG00000139767 1060 0.774 - 0.774 serine/arginine repetitive matrix 4 [Source:HGNC Symbol;Acc:HGNC:29389]
37. NELL2 ENSG00000184613 1519 0.771 0.771 - neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]
38. GDI1 ENSG00000203879 6108 0.77 0.770 - GDP dissociation inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:4226]
39. DPYSL2 ENSG00000092964 47074 0.768 0.768 - dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
40. CELSR2 ENSG00000143126 3566 0.767 0.767 - cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
41. TUBB2A ENSG00000137267 4508 0.759 0.759 - tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
42. TMEM176A ENSG00000002933 854 0.759 - 0.759 transmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]
43. CALM1 ENSG00000198668 24434 0.757 0.757 - calmodulin 1 [Source:HGNC Symbol;Acc:HGNC:1442]
44. SNAP25 ENSG00000132639 1533 0.755 0.755 - synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]
45. TMEM176B ENSG00000106565 1876 0.753 0.753 - transmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]
46. MAP6 ENSG00000171533 1692 0.752 0.752 - microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
47. OLFM1 ENSG00000130558 1162 0.752 0.752 - olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]
48. NOVA2 ENSG00000104967 253 0.751 0.751 - NOVA alternative splicing regulator 2 [Source:HGNC Symbol;Acc:HGNC:7887]
49. REEP2 ENSG00000132563 586 0.747 0.747 - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
50. MLLT11 ENSG00000213190 18099 0.746 0.746 - MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
51. PRR36 ENSG00000183248 485 0.746 - 0.746 proline rich 36 [Source:HGNC Symbol;Acc:HGNC:26172]
52. CDH4 ENSG00000179242, ENSG00000280641 1069 0.745 0.745 - cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]
53. ADGRG1 ENSG00000205336 800 0.74 0.740 - adhesion G protein-coupled receptor G1 [Source:HGNC Symbol;Acc:HGNC:4512]
54. NES ENSG00000132688 20034 0.738 0.738 - nestin [Source:HGNC Symbol;Acc:HGNC:7756]
55. DLL3 ENSG00000090932 826 0.738 0.738 - delta like canonical Notch ligand 3 [Source:HGNC Symbol;Acc:HGNC:2909]
56. MYT1 ENSG00000196132, ENSG00000276876 1089 0.736 0.736 - myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
57. FZD3 ENSG00000104290 11650 0.736 0.736 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
58. ATP6V1G2 ENSG00000206445, ENSG00000213760, ENSG00000226850, ENSG00000227587, ENSG00000230900, ENSG00000234668, ENSG00000234920 2106 0.735 0.735 - ATPase H+ transporting V1 subunit G2 [Source:HGNC Symbol;Acc:HGNC:862]
59. INA ENSG00000148798 12811 0.734 0.734 - internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
60. SYT1 ENSG00000067715 4379 0.728 0.728 - synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]
61. CDK5R1 ENSG00000176749 4151 0.727 0.727 - cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
62. REEP1 ENSG00000068615 2132 0.725 0.725 - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
63. CKB ENSG00000166165 54181 0.723 0.723 - creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
64. C16orf45 ENSG00000166780, ENSG00000278823 4846 0.723 0.723 - chromosome 16 open reading frame 45 [Source:HGNC Symbol;Acc:HGNC:19213]
65. TP53INP2 ENSG00000078804 726 0.721 0.721 - tumor protein p53 inducible nuclear protein 2 [Source:HGNC Symbol;Acc:HGNC:16104]
66. NKAIN3 ENSG00000185942 2284 0.72 0.720 - sodium/potassium transporting ATPase interacting 3 [Source:HGNC Symbol;Acc:HGNC:26829]
67. KIAA1211 ENSG00000109265 3794 0.72 0.720 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
68. GPM6A ENSG00000150625 911 0.719 0.719 - glycoprotein M6A [Source:HGNC Symbol;Acc:HGNC:4460]
69. TSPAN18 ENSG00000157570 9391 0.718 0.718 - tetraspanin 18 [Source:HGNC Symbol;Acc:HGNC:20660]
70. ATL1 ENSG00000198513 540 0.718 0.718 - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
71. DBNDD1 ENSG00000003249 1043 0.717 0.717 - dysbindin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28455]
72. UCHL1 ENSG00000154277 28345 0.717 0.717 - ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513]
73. GNG4 ENSG00000168243, ENSG00000282972 1085 0.717 0.717 - G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
74. FGF13 ENSG00000129682 1528 0.715 0.715 - fibroblast growth factor 13 [Source:HGNC Symbol;Acc:HGNC:3670]
75. DCLK1 ENSG00000133083 1008 0.713 0.713 - doublecortin like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2700]
76. NPTX2 ENSG00000106236 199 0.712 0.712 - neuronal pentraxin 2 [Source:HGNC Symbol;Acc:HGNC:7953]
77. ELAVL2 ENSG00000107105 5067 0.712 0.712 - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
78. MIAT ENSG00000225783 2977 0.712 0.712 - myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
79. GPC2 ENSG00000213420 2085 0.712 0.712 - glypican 2 [Source:HGNC Symbol;Acc:HGNC:4450]
80. PKIA ENSG00000171033 3637 0.71 0.710 - cAMP-dependent protein kinase inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:9017]
81. FSD1L ENSG00000106701 740 0.71 0.710 - fibronectin type III and SPRY domain containing 1 like [Source:HGNC Symbol;Acc:HGNC:13753]
82. RTN1 ENSG00000139970 4545 0.71 0.710 - reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
83. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.709 0.709 - tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
84. TMEM158 ENSG00000249992 678 0.707 0.707 - transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
85. TERF2IP ENSG00000166848 18929 0.707 0.707 - TERF2 interacting protein [Source:HGNC Symbol;Acc:HGNC:19246]
86. EIF1B ENSG00000114784 10279 0.707 0.707 - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
87. BEX1 ENSG00000133169 38008 0.706 0.706 - brain expressed X-linked 1 [Source:HGNC Symbol;Acc:HGNC:1036]
88. TUNAR ENSG00000250366 89 0.706 - 0.706 TCL1 upstream neural differentiation-associated RNA [Source:HGNC Symbol;Acc:HGNC:44088]
89. HMP19 643 0.706 0.706 - HMP19 protein
90. LOC101929563 1404 0.705 0.705 - uncharacterized LOC101929563
91. NMNAT2 ENSG00000157064 340 0.705 0.705 - nicotinamide nucleotide adenylyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:16789]
92. CEND1 ENSG00000184524 300 0.705 0.705 - cell cycle exit and neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:24153]
93. DPYSL4 ENSG00000151640 2914 0.705 0.705 - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
94. GNG3 ENSG00000162188 958 0.705 - 0.705 G protein subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:4405]
95. KLHL35 ENSG00000149243 877 0.7 0.700 - kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
96. ADD2 ENSG00000075340 810 0.7 - 0.700 adducin 2 [Source:HGNC Symbol;Acc:HGNC:244]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA