Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXC5

Gene Name Gene ID Reads Annotation
HOXC5 ENSG00000172789, ENSG00000273046 4001 homeobox C5 [Source:NCBI gene;Acc:3222]



Genes with expression patterns similar to HOXC5

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. HOXC5 ENSG00000172789, ENSG00000273046 4001 2 1.000 1.000 homeobox C5 [Source:NCBI gene;Acc:3222]
2. SOX2 ENSG00000181449 19791 0.825 0.825 - SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
3. HOXC6 ENSG00000197757 13409 0.819 - 0.819 homeobox C6 [Source:HGNC Symbol;Acc:HGNC:5128]
4. LINC00461 ENSG00000245526 4465 0.819 0.819 - long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
5. RFX4 ENSG00000111783 1382 0.818 0.818 - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
6. ZIC1 ENSG00000152977 18260 0.794 0.794 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
7. SLC2A1 ENSG00000117394 2892 0.79 0.790 - solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]
8. AXIN2 ENSG00000168646 2778 0.784 0.784 - axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
9. FUS ENSG00000089280 23952 0.783 - 0.783 FUS RNA binding protein [Source:HGNC Symbol;Acc:HGNC:4010]
10. ZIC4 ENSG00000174963 2667 0.783 0.783 - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
11. MCM5 ENSG00000100297 8452 0.782 - 0.782 minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]
12. SCUBE2 ENSG00000175356 1730 0.78 0.780 - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
13. RPS27 ENSG00000177954 553869 0.777 0.777 - ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
14. RND2 ENSG00000108830 3761 0.774 0.774 - Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
15. PRDM13 ENSG00000112238 312 0.774 0.774 - PR/SET domain 13 [Source:HGNC Symbol;Acc:HGNC:13998]
16. SOX1 ENSG00000182968 1339 0.771 0.771 - SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
17. DCC ENSG00000187323 538 0.77 0.770 - DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
18. CRABP1 ENSG00000166426 2178 0.77 0.770 - cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
19. HOXB-AS3 ENSG00000233101 1776 0.767 0.767 - HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
20. IGFBPL1 ENSG00000137142 3283 0.767 0.767 - insulin like growth factor binding protein like 1 [Source:HGNC Symbol;Acc:HGNC:20081]
21. PKM ENSG00000067225 58854 0.764 - 0.764 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
22. APCDD1 ENSG00000154856 2448 0.764 0.764 - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
23. TOX3 ENSG00000103460 1758 0.762 0.762 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
24. ZIC5 ENSG00000139800 441 0.76 0.760 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
25. ZIC2 ENSG00000043355 4457 0.76 0.760 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
26. CBS ENSG00000160200 15678 0.759 - 0.759 cystathionine-beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
27. HES5 ENSG00000197921, ENSG00000273529 9293 0.759 0.759 - hes family bHLH transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:19764]
28. ATP5SL 25967 0.755 - 0.755 ATP5S like, transcript variant X1
29. POLR2E ENSG00000099817 7529 0.751 - 0.751 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
30. GFPT2 ENSG00000131459 2934 0.75 - 0.750 glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
31. OLIG3 ENSG00000177468 918 0.748 0.748 - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
32. FZD10 ENSG00000111432 608 0.747 0.747 - frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
33. HES6 ENSG00000144485 4284 0.745 0.745 - hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
34. DLL1 ENSG00000198719, ENSG00000275555 1642 0.744 0.744 - delta like canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:2908]
35. SOX3 ENSG00000134595 5297 0.743 0.743 - SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
36. TPI1 ENSG00000111669 19510 0.742 - 0.742 triosephosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:12009]
37. NRARP ENSG00000198435 1658 0.742 0.742 - NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
38. LOC100240734 1898 0.741 0.741 - uncharacterized LOC100240734
39. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.741 0.741 - tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
40. SRRT ENSG00000087087 9730 0.737 - 0.737 serrate, RNA effector molecule [Source:HGNC Symbol;Acc:HGNC:24101]
41. SYT2 ENSG00000143858 2364 0.736 0.736 - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
42. TOX ENSG00000198846 1208 0.734 0.734 - thymocyte selection associated high mobility group box [Source:HGNC Symbol;Acc:HGNC:18988]
43. STAC ENSG00000144681 259 0.734 0.734 - SH3 and cysteine rich domain [Source:HGNC Symbol;Acc:HGNC:11353]
44. LFNG ENSG00000106003 1260 0.734 0.734 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]
45. MSI1 ENSG00000135097 6935 0.734 0.734 - musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
46. SLC25A1 ENSG00000100075 6981 0.732 - 0.732 solute carrier family 25 member 1 [Source:HGNC Symbol;Acc:HGNC:10979]
47. ZBTB16 ENSG00000109906 287 0.732 0.732 - zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]
48. WSCD1 ENSG00000179314 1121 0.731 0.731 - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
49. ENO1 ENSG00000074800 57728 0.73 - 0.730 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
50. FAM181A ENSG00000140067, ENSG00000273533 1757 0.73 0.730 - family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
51. LINC00925 LINC00925 517 0.729 0.729 -
52. TMEM158 ENSG00000249992 678 0.729 0.729 - transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]
53. RPL4 ENSG00000174444 87809 0.728 - 0.728 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
54. EDF1 ENSG00000107223 7204 0.728 - 0.728 endothelial differentiation related factor 1 [Source:HGNC Symbol;Acc:HGNC:3164]
55. OLMALINC ENSG00000235823 4999 0.727 - 0.727 oligodendrocyte maturation-associated long intergenic non-coding RNA [Source:HGNC Symbol;Acc:HGNC:28060]
56. TKTL1 ENSG00000007350 1212 0.726 0.726 - transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
57. Sep-06 Sep-06 11312 0.725 - 0.725
58. POU3F2 ENSG00000184486 2683 0.724 0.724 - POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
59. RPS15 ENSG00000115268 79390 0.724 - 0.724 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
60. GBX2 ENSG00000168505 227 0.723 0.723 - gastrulation brain homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4186]
61. WNT3A ENSG00000154342 267 0.723 0.723 - Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
62. AURKB ENSG00000178999 25157 0.723 - 0.723 aurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]
63. FZD3 ENSG00000104290 11650 0.718 0.718 - frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]
64. FGFR3 ENSG00000068078 2862 0.718 0.718 - fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
65. MAD2L1 ENSG00000164109 11065 0.717 0.717 - mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]
66. MIAT ENSG00000225783 2977 0.716 0.716 - myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
67. RNF220 ENSG00000187147 3715 0.713 - 0.713 ring finger protein 220 [Source:HGNC Symbol;Acc:HGNC:25552]
68. CKB ENSG00000166165 54181 0.712 0.712 - creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
69. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 314035 0.712 - 0.712 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
70. PTPRZ1 ENSG00000106278 1326 0.711 0.711 - protein tyrosine phosphatase, receptor type Z1 [Source:HGNC Symbol;Acc:HGNC:9685]
71. SLC1A2 ENSG00000110436 1231 0.71 0.710 - solute carrier family 1 member 2 [Source:HGNC Symbol;Acc:HGNC:10940]
72. PDAP1 ENSG00000106244 8971 0.71 - 0.710 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
73. CARM1 ENSG00000142453 4208 0.709 - 0.709 coactivator associated arginine methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23393]
74. WNT1 ENSG00000125084 1392 0.708 0.708 - Wnt family member 1 [Source:HGNC Symbol;Acc:HGNC:12774]
75. HOXB2 ENSG00000173917 6040 0.707 0.707 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
76. NNAT ENSG00000053438 98856 0.707 - 0.707 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
77. PGD ENSG00000142657 19400 0.705 - 0.705 phosphogluconate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8891]
78. MCM7 ENSG00000166508 22547 0.705 - 0.705 minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]
79. TECR ENSG00000099797 4028 0.704 - 0.704 trans-2,3-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:4551]
80. RHBDL3 ENSG00000141314 2571 0.703 0.703 - rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
81. CSPG5 ENSG00000114646 558 0.703 0.703 - chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]
82. MSX1 ENSG00000163132 2038 0.702 0.702 - msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]
83. EEF2 ENSG00000167658 47680 0.701 - 0.701 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
84. CCDC85C ENSG00000205476 3808 0.7 0.700 - coiled-coil domain containing 85C [Source:HGNC Symbol;Acc:HGNC:35459]
85. STIP1 ENSG00000168439 6567 0.7 - 0.700 stress induced phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:11387]
86. RBMX ENSG00000147274 44052 0.7 - 0.700 RNA binding motif protein X-linked [Source:HGNC Symbol;Acc:HGNC:9910]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA