Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMPD3

Gene Name Gene ID Reads Annotation
SMPD3 ENSG00000103056 241 sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]



Genes with expression patterns similar to SMPD3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SMPD3 ENSG00000103056 241 2 1.000 1.000 sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
2. ENO2 ENSG00000111674 2931 1.72 0.807 0.913 enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
3. TUBB2A ENSG00000137267 4508 1.689 0.842 0.847 tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
4. TUBB3 ENSG00000258947 53998 1.687 0.822 0.865 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
5. MYT1 ENSG00000196132, ENSG00000276876 1089 1.676 0.885 0.791 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
6. CRMP1 ENSG00000072832 9692 1.658 0.785 0.873 collapsin response mediator protein 1 [Source:HGNC Symbol;Acc:HGNC:2365]
7. STMN4 ENSG00000015592 748 1.654 0.800 0.854 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
8. RTN1 ENSG00000139970 4545 1.645 0.832 0.813 reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
9. MLLT11 ENSG00000213190 18099 1.641 0.853 0.788 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
10. PHF21B ENSG00000056487 2704 1.633 0.806 0.827 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
11. CNTN2 ENSG00000184144 4674 1.623 0.788 0.835 contactin 2 [Source:HGNC Symbol;Acc:HGNC:2172]
12. ELAVL4 ENSG00000162374 5082 1.62 0.810 0.810 ELAV like RNA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:3315]
13. SST ENSG00000157005 12887 1.615 0.833 0.782 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
14. ELAVL3 ENSG00000196361 2164 1.615 0.795 0.820 ELAV like RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3314]
15. INA ENSG00000148798 12811 1.614 0.791 0.823 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
16. TUBA1A ENSG00000167552 83799 1.614 0.782 0.832 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
17. KIF1A ENSG00000130294 2920 1.61 0.806 0.804 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
18. KLC1 ENSG00000126214 6387 1.604 0.772 0.832 kinesin light chain 1 [Source:HGNC Symbol;Acc:HGNC:6387]
19. STMN2 ENSG00000104435 16286 1.604 0.821 0.783 stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
20. CDK5R1 ENSG00000176749 4151 1.584 0.756 0.828 cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
21. SYT4 ENSG00000132872 928 1.58 0.819 0.761 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
22. GAP43 ENSG00000172020 9990 1.577 0.782 0.795 growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]
23. HMP19 643 1.568 0.767 0.801 HMP19 protein
24. L1CAM ENSG00000198910 1652 1.568 0.819 0.749 L1 cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:6470]
25. GDAP1L1 ENSG00000124194 1388 1.562 0.772 0.790 ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
26. MAP2 ENSG00000078018 3573 1.561 0.753 0.808 microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
27. PDLIM1 ENSG00000107438 11977 1.561 0.789 0.772 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
28. TAGLN3 ENSG00000144834 10185 1.561 0.749 0.812 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
29. TERF2IP ENSG00000166848 18929 1.559 0.791 0.768 TERF2 interacting protein [Source:HGNC Symbol;Acc:HGNC:19246]
30. MAPT ENSG00000186868, ENSG00000276155, ENSG00000277956 1829 1.548 0.758 0.790 microtubule associated protein tau [Source:HGNC Symbol;Acc:HGNC:6893]
31. DPYSL3 ENSG00000113657 7319 1.548 0.762 0.786 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
32. APC2 ENSG00000115266 1420 1.545 0.811 0.734 APC2, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:24036]
33. LHX3 ENSG00000107187 507 1.544 0.834 0.710 LIM homeobox 3 [Source:HGNC Symbol;Acc:HGNC:6595]
34. GNG3 ENSG00000162188 958 1.544 0.711 0.833 G protein subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:4405]
35. ATP6V1G2 ENSG00000206445, ENSG00000213760, ENSG00000226850, ENSG00000227587, ENSG00000230900, ENSG00000234668, ENSG00000234920 2106 1.541 0.760 0.781 ATPase H+ transporting V1 subunit G2 [Source:HGNC Symbol;Acc:HGNC:862]
36. SYT1 ENSG00000067715 4379 1.54 0.811 0.729 synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]
37. CDKN2D ENSG00000129355 839 1.54 0.821 0.719 cyclin dependent kinase inhibitor 2D [Source:HGNC Symbol;Acc:HGNC:1790]
38. BSN ENSG00000164061 737 1.535 0.724 0.811 bassoon presynaptic cytomatrix protein [Source:HGNC Symbol;Acc:HGNC:1117]
39. APLP1 ENSG00000105290 11270 1.535 0.702 0.833 amyloid beta precursor like protein 1 [Source:HGNC Symbol;Acc:HGNC:597]
40. NEFM ENSG00000104722 6565 1.534 0.747 0.787 neurofilament medium [Source:HGNC Symbol;Acc:HGNC:7734]
41. STMN3 ENSG00000197457 2808 1.527 0.743 0.784 stathmin 3 [Source:HGNC Symbol;Acc:HGNC:15926]
42. SNCG ENSG00000173267 1866 1.526 0.808 0.718 synuclein gamma [Source:HGNC Symbol;Acc:HGNC:11141]
43. SCG3 ENSG00000104112 681 1.517 0.721 0.796 secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]
44. CAMK2N1 ENSG00000162545 10727 1.515 0.714 0.801 calcium/calmodulin dependent protein kinase II inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:24190]
45. NEFL ENSG00000277586 6204 1.511 0.771 0.740 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
46. SEZ6L2 ENSG00000174938 1533 1.507 0.713 0.794 seizure related 6 homolog like 2 [Source:HGNC Symbol;Acc:HGNC:30844]
47. KLHL35 ENSG00000149243 877 1.505 0.775 0.730 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
48. SRRM4 ENSG00000139767 1060 1.504 0.712 0.792 serine/arginine repetitive matrix 4 [Source:HGNC Symbol;Acc:HGNC:29389]
49. SV2C ENSG00000122012 837 1.503 0.787 0.716 synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
50. MAP1B ENSG00000131711 44568 1.5 0.732 0.768 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
51. KIF5C ENSG00000168280, ENSG00000276734 1294 1.494 0.705 0.789 kinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]
52. SCN3A ENSG00000153253 621 1.488 0.766 0.722 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
53. TRIM36 ENSG00000152503 452 1.486 0.759 0.727 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
54. RBFOX3 ENSG00000167281 329 1.48 0.750 0.730 RNA binding fox-1 homolog 3 [Source:HGNC Symbol;Acc:HGNC:27097]
55. ATP1A3 ENSG00000105409 428 1.477 0.731 0.746 ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
56. REEP2 ENSG00000132563 586 1.475 0.714 0.761 receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
57. GAB2 ENSG00000033327 1360 1.44 0.717 0.723 GRB2 associated binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14458]
58. MAPRE2 ENSG00000166974 5413 1.411 0.703 0.708 microtubule associated protein RP/EB family member 2 [Source:HGNC Symbol;Acc:HGNC:6891]
59. CHRNA4 ENSG00000101204 750 0.852 - 0.852 cholinergic receptor nicotinic alpha 4 subunit [Source:HGNC Symbol;Acc:HGNC:1958]
60. GNG2 ENSG00000186469 5596 0.849 0.849 - G protein subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:4404]
61. UNC13A ENSG00000130477 162 0.835 0.835 - unc-13 homolog A [Source:HGNC Symbol;Acc:HGNC:23150]
62. NCAN ENSG00000130287 1136 0.833 - 0.833 neurocan [Source:HGNC Symbol;Acc:HGNC:2465]
63. ISL1 ENSG00000016082 4314 0.833 0.833 - ISL LIM homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6132]
64. CEND1 ENSG00000184524 300 0.83 - 0.830 cell cycle exit and neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:24153]
65. UBE2QL1 ENSG00000215218 1320 0.83 - 0.830 ubiquitin conjugating enzyme E2 Q family like 1 [Source:HGNC Symbol;Acc:HGNC:37269]
66. ISL2 ENSG00000159556 593 0.818 0.818 - ISL LIM homeobox 2 [Source:HGNC Symbol;Acc:HGNC:18524]
67. CALM2 ENSG00000143933 43735 0.816 0.816 - calmodulin 2 [Source:HGNC Symbol;Acc:HGNC:1445]
68. TUBB2B ENSG00000137285 35642 0.803 - 0.803 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
69. CECR1 7500 0.801 - 0.801 cat eye syndrome chromosome region, candidate 1, transcript variant X1
70. YWHAZ ENSG00000164924 56105 0.801 0.801 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
71. SRRM3 ENSG00000177679 71 0.8 - 0.800 serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]
72. TPD52 ENSG00000076554 1023 0.797 0.797 - tumor protein D52 [Source:HGNC Symbol;Acc:HGNC:12005]
73. CADPS ENSG00000163618 1353 0.793 0.793 - calcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]
74. ELAVL2 ENSG00000107105 5067 0.792 0.792 - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
75. CALCB ENSG00000175868 1967 0.787 - 0.787 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]
76. RUNDC3A ENSG00000108309 522 0.786 - 0.786 RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
77. FBXL16 ENSG00000127585 196 0.782 - 0.782 F-box and leucine rich repeat protein 16 [Source:HGNC Symbol;Acc:HGNC:14150]
78. GNAO1 ENSG00000087258 567 0.78 - 0.780 G protein subunit alpha o1 [Source:HGNC Symbol;Acc:HGNC:4389]
79. SNAP25 ENSG00000132639 1533 0.779 0.779 - synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]
80. HOXC9 ENSG00000180806 3191 0.778 - 0.778 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]
81. CALY ENSG00000130643 78 0.775 - 0.775 calcyon neuron specific vesicular protein [Source:HGNC Symbol;Acc:HGNC:17938]
82. DCX ENSG00000077279 9569 0.774 0.774 - doublecortin [Source:HGNC Symbol;Acc:HGNC:2714]
83. RAB6B ENSG00000154917 1104 0.77 - 0.770 RAB6B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14902]
84. FEZ1 ENSG00000149557 1181 0.768 - 0.768 fasciculation and elongation protein zeta 1 [Source:HGNC Symbol;Acc:HGNC:3659]
85. CCDC184 ENSG00000177875 785 0.767 - 0.767 coiled-coil domain containing 184 [Source:HGNC Symbol;Acc:HGNC:33749]
86. REEP1 ENSG00000068615 2132 0.767 0.767 - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
87. RUFY3 ENSG00000018189 4536 0.766 - 0.766 RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
88. ZEB1 ENSG00000148516 5171 0.765 0.765 - zinc finger E-box binding homeobox 1 [Source:HGNC Symbol;Acc:HGNC:11642]
89. NKAIN3 ENSG00000185942 2284 0.765 0.765 - sodium/potassium transporting ATPase interacting 3 [Source:HGNC Symbol;Acc:HGNC:26829]
90. GNG4 ENSG00000168243, ENSG00000282972 1085 0.764 - 0.764 G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
91. PRDM8 ENSG00000152784 1304 0.763 0.763 - PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
92. EPB41L1 ENSG00000088367 2310 0.762 - 0.762 erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
93. PPP1R1A ENSG00000135447 607 0.761 - 0.761 protein phosphatase 1 regulatory inhibitor subunit 1A [Source:HGNC Symbol;Acc:HGNC:9286]
94. Sep-03 Sep-03 2608 0.759 - 0.759
95. GRIK3 ENSG00000163873 146 0.758 0.758 - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
96. LINC00599 ENSG00000253230, ENSG00000284859 293 0.756 0.756 - long intergenic non-protein coding RNA 599 [Source:HGNC Symbol;Acc:HGNC:27231]
97. FAM57B ENSG00000149926 119 0.756 - 0.756 family with sequence similarity 57 member B [Source:HGNC Symbol;Acc:HGNC:25295]
98. MANEAL ENSG00000185090 1846 0.756 - 0.756 mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
99. DPYSL4 ENSG00000151640 2914 0.751 - 0.751 dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
100. BASP1 ENSG00000176788 18176 0.748 0.748 - brain abundant membrane attached signal protein 1 [Source:HGNC Symbol;Acc:HGNC:957]

There are 69 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA