Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00857

Gene Name Gene ID Reads Annotation
LINC00857 ENSG00000237523 22 long intergenic non-protein coding RNA 857 [Source:HGNC Symbol;Acc:HGNC:45114]



Genes with expression patterns similar to LINC00857

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00857 ENSG00000237523 22 2 1.000 1.000 long intergenic non-protein coding RNA 857 [Source:HGNC Symbol;Acc:HGNC:45114]
2. ITGAX ENSG00000140678 10 1 1.000 - integrin subunit alpha X [Source:HGNC Symbol;Acc:HGNC:6152]
3. LOC151475 6 1 1.000 - uncharacterized LOC151475
4. THSD4-AS2 6 1 1.000 - THSD4 antisense RNA 2
5. LINC01024 8 1 1.000 - long intergenic non-protein coding RNA 1024, transcript variant 3
6. LOC442028 5 1 1.000 - uncharacterized LOC442028
7. LOC101929592 5 1 1.000 - uncharacterized LOC101929592
8. BOLA2B ENSG00000169627 9 1 1.000 - bolA family member 2B [Source:HGNC Symbol;Acc:HGNC:32479]
9. YIPF7 ENSG00000177752 26 1 1.000 - Yip1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:26825]
10. LOC101927058 7 1 1.000 - uncharacterized LOC101927058
11. ACOT12 ENSG00000172497 6 1 1.000 - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
12. CST5 ENSG00000170367 7 0.971 0.971 - cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]
13. C3orf49 ENSG00000163632 6 0.954 0.954 - chromosome 3 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:25190]
14. AATK-AS1 7 0.953 0.953 - AATK antisense RNA 1
15. LINC00511 ENSG00000227036 19 0.922 0.922 - long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]
16. RPL32 ENSG00000144713 110817 0.917 0.917 - ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
17. SPG20-AS1 11 0.916 0.916 - SPG20 antisense RNA 1, transcript variant 2
18. F10-AS1 ENSG00000231882 9 0.894 0.894 - F10 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40225]
19. SLC35G1 ENSG00000176273 60 0.892 0.892 - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
20. GABRA4 ENSG00000109158 43 0.891 0.891 - gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
21. KCNF1 ENSG00000162975 46 0.888 0.888 - potassium voltage-gated channel modifier subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:6246]
22. ANXA2R ENSG00000177721 34 0.881 0.881 - annexin A2 receptor [Source:HGNC Symbol;Acc:HGNC:33463]
23. SDR16C5 ENSG00000170786 8 0.88 0.880 - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
24. KCNJ13 ENSG00000115474 12 0.88 0.880 - potassium voltage-gated channel subfamily J member 13 [Source:HGNC Symbol;Acc:HGNC:6259]
25. LINC00540 ENSG00000276476 59 0.872 0.872 - long intergenic non-protein coding RNA 540 [Source:NCBI gene;Acc:100506622]
26. LOC100508046 11 0.871 0.871 - uncharacterized LOC100508046
27. LINC00629 ENSG00000227060 74 0.869 0.869 - long intergenic non-protein coding RNA 629 [Source:HGNC Symbol;Acc:HGNC:44262]
28. EFCAB5 ENSG00000176927 14 0.862 0.862 - EF-hand calcium binding domain 5 [Source:HGNC Symbol;Acc:HGNC:24801]
29. UBA7 ENSG00000182179 233 0.86 0.860 - ubiquitin like modifier activating enzyme 7 [Source:HGNC Symbol;Acc:HGNC:12471]
30. LINC00626 ENSG00000225826 44 0.853 0.853 - long intergenic non-protein coding RNA 626 [Source:HGNC Symbol;Acc:HGNC:44257]
31. DNAJC7 ENSG00000168259 132 0.845 0.845 - DnaJ heat shock protein family (Hsp40) member C7 [Source:HGNC Symbol;Acc:HGNC:12392]
32. LINC01393 ENSG00000225535 17 0.839 0.839 - long intergenic non-protein coding RNA 1393 [Source:HGNC Symbol;Acc:HGNC:50669]
33. ANKRD26P1 ENSG00000261239 12 0.835 0.835 - ankyrin repeat domain 26 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:32955]
34. TERC ENSG00000270141 167 0.834 0.834 - telomerase RNA component [Source:HGNC Symbol;Acc:HGNC:11727]
35. SYDE2 ENSG00000097096 64 0.828 0.828 - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
36. HERC2P4 ENSG00000230267 17 0.825 0.825 - hect domain and RLD 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:4872]
37. NAMA ENSG00000271086 11 0.821 0.821 - non-protein coding RNA, associated with MAP kinase pathway and growth arrest [Source:NCBI gene;Acc:100996569]
38. MAT1A ENSG00000151224 13 0.821 0.821 - methionine adenosyltransferase 1A [Source:HGNC Symbol;Acc:HGNC:6903]
39. LOC101927157 22 0.813 0.813 - uncharacterized LOC101927157
40. CTAGE8 ENSG00000244693, ENSG00000285175 9 0.812 0.812 - CTAGE family member 8 [Source:HGNC Symbol;Acc:HGNC:37294]
41. LOC101929767 894 0.811 0.811 - uncharacterized LOC101929767
42. TBX15 ENSG00000092607 34 0.808 0.808 - T-box 15 [Source:HGNC Symbol;Acc:HGNC:11594]
43. CCL28 ENSG00000151882 54 0.802 0.802 - C-C motif chemokine ligand 28 [Source:HGNC Symbol;Acc:HGNC:17700]
44. GYG2 ENSG00000056998 2624 0.798 0.798 - glycogenin 2 [Source:HGNC Symbol;Acc:HGNC:4700]
45. ADAMTSL4 ENSG00000143382 29 0.798 0.798 - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
46. LOC100132891 LOC100132891 23 0.792 0.792 -
47. ALDH1L2 ENSG00000136010 17 0.792 0.792 - aldehyde dehydrogenase 1 family member L2 [Source:HGNC Symbol;Acc:HGNC:26777]
48. FAU ENSG00000149806 78286 0.791 0.791 - FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
49. FAM136A ENSG00000035141 3827 0.788 0.788 - family with sequence similarity 136 member A [Source:HGNC Symbol;Acc:HGNC:25911]
50. TCP11 ENSG00000124678 34 0.786 0.786 - t-complex 11 [Source:HGNC Symbol;Acc:HGNC:11658]
51. WISP1 ENSG00000104415 414 0.786 0.786 - WNT1 inducible signaling pathway protein 1 [Source:HGNC Symbol;Acc:HGNC:12769]
52. HNRNPA1P33 ENSG00000213412 13 0.783 0.783 - heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 [Source:HGNC Symbol;Acc:HGNC:44990]
53. LOC101926944 18 0.78 0.780 - uncharacterized LOC101926944
54. LTB4R ENSG00000213903, ENSG00000285456 125 0.779 0.779 - leukotriene B4 receptor [Source:HGNC Symbol;Acc:HGNC:6713]
55. RPS29 ENSG00000213741 173188 0.778 0.778 - ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
56. APLN ENSG00000171388 219 0.777 0.777 - apelin [Source:HGNC Symbol;Acc:HGNC:16665]
57. FANCB ENSG00000181544 178 0.772 0.772 - FA complementation group B [Source:HGNC Symbol;Acc:HGNC:3583]
58. FAM8A1 ENSG00000137414 2530 0.771 0.771 - family with sequence similarity 8 member A1 [Source:HGNC Symbol;Acc:HGNC:16372]
59. DDX26B-AS1 DDX26B-AS1 26 0.77 0.770 -
60. LOC728084 12 0.768 0.768 - uncharacterized LOC728084
61. HTR7 ENSG00000148680 58 0.763 0.763 - 5-hydroxytryptamine receptor 7 [Source:HGNC Symbol;Acc:HGNC:5302]
62. BMPR1B-AS1 28 0.758 0.758 - BMPR1B antisense RNA 1 (head to head)
63. CYP3A4 ENSG00000160868 14 0.757 0.757 - cytochrome P450 family 3 subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:2637]
64. SERPINA1 ENSG00000197249, ENSG00000277377 1757 0.756 0.756 - serpin family A member 1 [Source:HGNC Symbol;Acc:HGNC:8941]
65. LINC00341 256 0.755 0.755 - long intergenic non-protein coding RNA 341
66. FOXCUT ENSG00000280916 79 0.754 0.754 - FOXC1 upstream transcript [Source:HGNC Symbol;Acc:HGNC:50650]
67. HTR2B ENSG00000135914 12 0.754 0.754 - 5-hydroxytryptamine receptor 2B [Source:HGNC Symbol;Acc:HGNC:5294]
68. TMEM258 ENSG00000134825 61705 0.753 0.753 - transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
69. SCGB3A1 ENSG00000161055 21 0.752 0.752 - secretoglobin family 3A member 1 [Source:HGNC Symbol;Acc:HGNC:18384]
70. BTD ENSG00000169814 477 0.752 0.752 - biotinidase [Source:HGNC Symbol;Acc:HGNC:1122]
71. TRAPPC1 ENSG00000170043 3295 0.75 0.750 - trafficking protein particle complex 1 [Source:HGNC Symbol;Acc:HGNC:19894]
72. WDR11-AS1 ENSG00000227165 30 0.748 0.748 - WDR11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27437]
73. DNHD1 ENSG00000179532 194 0.746 0.746 - dynein heavy chain domain 1 [Source:HGNC Symbol;Acc:HGNC:26532]
74. PMS2P3 ENSG00000127957 27 0.742 0.742 - PMS1 homolog 2, mismatch repair system component pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:9128]
75. TMSB10 ENSG00000034510 51966 0.742 0.742 - thymosin beta 10 [Source:HGNC Symbol;Acc:HGNC:11879]
76. LY86-AS1 ENSG00000216863 25 0.741 0.741 - LY86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26593]
77. CCDC114 ENSG00000105479 34 0.74 0.740 - coiled-coil domain containing 114 [Source:HGNC Symbol;Acc:HGNC:26560]
78. SCAF1 ENSG00000126461 151 0.739 0.739 - SR-related CTD associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30403]
79. THBD ENSG00000178726 267 0.737 0.737 - thrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]
80. DNAJB13 ENSG00000187726 24 0.735 0.735 - DnaJ heat shock protein family (Hsp40) member B13 [Source:HGNC Symbol;Acc:HGNC:30718]
81. C2CD4B ENSG00000205502 55 0.734 0.734 - C2 calcium dependent domain containing 4B [Source:HGNC Symbol;Acc:HGNC:33628]
82. LILRB4 ENSG00000186818, ENSG00000275730, ENSG00000276042, ENSG00000278279, ENSG00000278555 19 0.729 0.729 - leukocyte immunoglobulin like receptor B4 [Source:HGNC Symbol;Acc:HGNC:6608]
83. AKT1 ENSG00000142208 4490 0.729 0.729 - AKT serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:391]
84. ELOVL2-AS1 ENSG00000230314 51 0.728 0.728 - ELOVL2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44156]
85. PSMC4 ENSG00000013275, ENSG00000281221 6978 0.728 0.728 - proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551]
86. PSMD2 ENSG00000175166 4463 0.727 0.727 - proteasome 26S subunit, non-ATPase 2 [Source:HGNC Symbol;Acc:HGNC:9559]
87. ABCG2 ENSG00000118777 395 0.726 0.726 - ATP binding cassette subfamily G member 2 (Junior blood group) [Source:HGNC Symbol;Acc:HGNC:74]
88. PSMB9 ENSG00000239836, ENSG00000240065, ENSG00000240118, ENSG00000240508, ENSG00000242711, ENSG00000243067, ENSG00000243594, ENSG00000243958 14 0.723 0.723 - proteasome subunit beta 9 [Source:HGNC Symbol;Acc:HGNC:9546]
89. PWRN2 ENSG00000260551 12 0.722 0.722 - Prader-Willi region non-protein coding RNA 2 [Source:HGNC Symbol;Acc:HGNC:33236]
90. HSPE1 ENSG00000115541 25751 0.722 0.722 - heat shock protein family E (Hsp10) member 1 [Source:HGNC Symbol;Acc:HGNC:5269]
91. FLJ36777 15 0.721 0.721 - uncharacterized LOC730971
92. STXBP5-AS1 ENSG00000233452 28 0.721 0.721 - STXBP5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44183]
93. UBA1 ENSG00000130985 20298 0.718 0.718 - ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
94. GABRR1 ENSG00000146276 66 0.717 0.717 - gamma-aminobutyric acid type A receptor rho1 subunit [Source:HGNC Symbol;Acc:HGNC:4090]
95. FAM86HP ENSG00000253540 258 0.717 0.717 - family with sequence similarity 86 member H, pseudogene [Source:HGNC Symbol;Acc:HGNC:42359]
96. NPHP1 ENSG00000144061 139 0.715 0.715 - nephrocystin 1 [Source:HGNC Symbol;Acc:HGNC:7905]
97. NECAP2 ENSG00000157191 2330 0.714 0.714 - NECAP endocytosis associated 2 [Source:HGNC Symbol;Acc:HGNC:25528]
98. SNORD104 ENSG00000199753 23 0.714 0.714 - small nucleolar RNA, C/D box 104 [Source:HGNC Symbol;Acc:HGNC:32768]
99. POLR2L ENSG00000177700 9908 0.712 0.712 - RNA polymerase II subunit L [Source:HGNC Symbol;Acc:HGNC:9199]
100. RPS5 ENSG00000083845 194442 0.712 0.712 - ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]

There are 9 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA