Multi-species embryo Tomo-Seq

Human data search

Results for LINC00540

Gene Name	Gene ID	Reads	Annotation
LINC00540	ENSG00000276476	59	long intergenic non-protein coding RNA 540 [Source:NCBI gene;Acc:100506622]

Genes with expression patterns similar to LINC00540

Nr.	Gene Name	Gene ID	Reads	Σ scores	35d slice1	35d slice2	Annotation
1.	LINC00540	ENSG00000276476	59	2	1.000	1.000	long intergenic non-protein coding RNA 540 [Source:NCBI gene;Acc:100506622]
2.	SDR16C5	ENSG00000170786	8	0.888	0.888	-	short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
3.	LOC101927058		7	0.872	0.872	-	uncharacterized LOC101927058
4.	ACOT12	ENSG00000172497	6	0.872	0.872	-	acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
5.	LINC00857	ENSG00000237523	22	0.872	0.872	-	long intergenic non-protein coding RNA 857 [Source:HGNC Symbol;Acc:HGNC:45114]
6.	YIPF7	ENSG00000177752	26	0.872	0.872	-	Yip1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:26825]
7.	THSD4-AS2		6	0.872	0.872	-	THSD4 antisense RNA 2
8.	LOC151475		6	0.872	0.872	-	uncharacterized LOC151475
9.	LINC01024		8	0.872	0.872	-	long intergenic non-protein coding RNA 1024, transcript variant 3
10.	LOC442028		5	0.872	0.872	-	uncharacterized LOC442028
11.	LOC101929592		5	0.872	0.872	-	uncharacterized LOC101929592
12.	BOLA2B	ENSG00000169627	9	0.872	0.872	-	bolA family member 2B [Source:HGNC Symbol;Acc:HGNC:32479]
13.	ITGAX	ENSG00000140678	10	0.872	0.872	-	integrin subunit alpha X [Source:HGNC Symbol;Acc:HGNC:6152]
14.	CST5	ENSG00000170367	7	0.844	0.844	-	cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]
15.	AATK-AS1		7	0.828	0.828	-	AATK antisense RNA 1
16.	C3orf49	ENSG00000163632	6	0.828	0.828	-	chromosome 3 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:25190]
17.	RPL32	ENSG00000144713	110817	0.804	0.804	-	ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
18.	LINC00511	ENSG00000227036	19	0.797	0.797	-	long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]
19.	SPG20-AS1		11	0.792	0.792	-	SPG20 antisense RNA 1, transcript variant 2
20.	LOC100132891	LOC100132891	23	0.79	0.790	-
21.	HNRNPA1P33	ENSG00000213412	13	0.787	0.787	-	heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 [Source:HGNC Symbol;Acc:HGNC:44990]
22.	F10-AS1	ENSG00000231882	9	0.775	0.775	-	F10 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40225]
23.	GABRA4	ENSG00000109158	43	0.77	0.770	-	gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
24.	MIR1273A	ENSG00000221753	17	0.764	0.764	-	microRNA 1273a [Source:HGNC Symbol;Acc:HGNC:35340]
25.	KCNF1	ENSG00000162975	46	0.762	0.762	-	potassium voltage-gated channel modifier subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:6246]
26.	ANXA2R	ENSG00000177721	34	0.758	0.758	-	annexin A2 receptor [Source:HGNC Symbol;Acc:HGNC:33463]
27.	SLC35G1	ENSG00000176273	60	0.758	0.758	-	solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
28.	KCNJ13	ENSG00000115474	12	0.757	0.757	-	potassium voltage-gated channel subfamily J member 13 [Source:HGNC Symbol;Acc:HGNC:6259]
29.	LOC100508046		11	0.751	0.751	-	uncharacterized LOC100508046
30.	EFCAB5	ENSG00000176927	14	0.746	0.746	-	EF-hand calcium binding domain 5 [Source:HGNC Symbol;Acc:HGNC:24801]
31.	CCL28	ENSG00000151882	54	0.734	0.734	-	C-C motif chemokine ligand 28 [Source:HGNC Symbol;Acc:HGNC:17700]
32.	LINC00626	ENSG00000225826	44	0.733	0.733	-	long intergenic non-protein coding RNA 626 [Source:HGNC Symbol;Acc:HGNC:44257]
33.	LINC00629	ENSG00000227060	74	0.731	0.731	-	long intergenic non-protein coding RNA 629 [Source:HGNC Symbol;Acc:HGNC:44262]
34.	PSMC4	ENSG00000013275, ENSG00000281221	6978	0.727	0.727	-	proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551]
35.	LINC01393	ENSG00000225535	17	0.725	0.725	-	long intergenic non-protein coding RNA 1393 [Source:HGNC Symbol;Acc:HGNC:50669]
36.	FAM136A	ENSG00000035141	3827	0.724	0.724	-	family with sequence similarity 136 member A [Source:HGNC Symbol;Acc:HGNC:25911]
37.	DNAJC7	ENSG00000168259	132	0.722	0.722	-	DnaJ heat shock protein family (Hsp40) member C7 [Source:HGNC Symbol;Acc:HGNC:12392]
38.	GYG2	ENSG00000056998	2624	0.72	0.720	-	glycogenin 2 [Source:HGNC Symbol;Acc:HGNC:4700]
39.	ELOVL2-AS1	ENSG00000230314	51	0.719	0.719	-	ELOVL2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44156]
40.	ANKRD26P1	ENSG00000261239	12	0.719	0.719	-	ankyrin repeat domain 26 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:32955]
41.	UBA7	ENSG00000182179	233	0.718	0.718	-	ubiquitin like modifier activating enzyme 7 [Source:HGNC Symbol;Acc:HGNC:12471]
42.	COG1	ENSG00000166685	323	0.714	0.714	-	component of oligomeric golgi complex 1 [Source:HGNC Symbol;Acc:HGNC:6545]
43.	HERC2P4	ENSG00000230267	17	0.71	0.710	-	hect domain and RLD 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:4872]
44.	TERC	ENSG00000270141	167	0.71	0.710	-	telomerase RNA component [Source:HGNC Symbol;Acc:HGNC:11727]
45.	DNHD1	ENSG00000179532	194	0.705	0.705	-	dynein heavy chain domain 1 [Source:HGNC Symbol;Acc:HGNC:26532]
46.	RPS29	ENSG00000213741	173188	0.705	0.705	-	ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
47.	MAT1A	ENSG00000151224	13	0.704	0.704	-	methionine adenosyltransferase 1A [Source:HGNC Symbol;Acc:HGNC:6903]
48.	SYDE2	ENSG00000097096	64	0.704	0.704	-	synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
49.	NAMA	ENSG00000271086	11	0.704	0.704	-	non-protein coding RNA, associated with MAP kinase pathway and growth arrest [Source:NCBI gene;Acc:100996569]