Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYDE2

Gene Name Gene ID Reads Annotation
SYDE2 ENSG00000097096 64 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]



Genes with expression patterns similar to SYDE2

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SYDE2 ENSG00000097096 64 2 1.000 1.000 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
2. LOC100508046 11 0.906 0.906 - uncharacterized LOC100508046
3. RAX2 ENSG00000173976 7 0.877 - 0.877 retina and anterior neural fold homeobox 2 [Source:HGNC Symbol;Acc:HGNC:18286]
4. FAM45B FAM45B 5 0.877 - 0.877
5. TBX21 ENSG00000073861 5 0.877 - 0.877 T-box 21 [Source:HGNC Symbol;Acc:HGNC:11599]
6. LOC103352541 8 0.875 - 0.875 uncharacterized LOC103352541
7. MPP4 ENSG00000082126 24 0.873 - 0.873 membrane palmitoylated protein 4 [Source:HGNC Symbol;Acc:HGNC:13680]
8. LOC101927692 37 0.872 - 0.872 uncharacterized LOC101927692
9. TRIM51HP ENSG00000166007 7 0.872 - 0.872 tripartite motif-containing 51H, pseudogene [Source:HGNC Symbol;Acc:HGNC:43977]
10. LOC101929454 6 0.87 - 0.870 uncharacterized LOC101929454
11. GTF2H2C_2 ENSG00000274675 9 0.865 - 0.865 GTF2H2 family member C, copy 2 [Source:HGNC Symbol;Acc:HGNC:35418]
12. MYH13 ENSG00000006788 7 0.859 - 0.859 myosin heavy chain 13 [Source:HGNC Symbol;Acc:HGNC:7571]
13. DEGS2 ENSG00000168350 37 0.858 - 0.858 delta 4-desaturase, sphingolipid 2 [Source:HGNC Symbol;Acc:HGNC:20113]
14. SPEF1 ENSG00000101222 8 0.858 - 0.858 sperm flagellar 1 [Source:HGNC Symbol;Acc:HGNC:15874]
15. LOC101928336 24 0.857 - 0.857 uncharacterized LOC101928336
16. LOC101929057 70 0.857 - 0.857 uncharacterized LOC101929057
17. CCDC183 ENSG00000213213 10 0.856 - 0.856 coiled-coil domain containing 183 [Source:HGNC Symbol;Acc:HGNC:28236]
18. DMRTB1 ENSG00000143006 7 0.855 - 0.855 DMRT like family B with proline rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:13913]
19. SLAMF6 ENSG00000162739 8 0.853 - 0.853 SLAM family member 6 [Source:HGNC Symbol;Acc:HGNC:21392]
20. MST1R ENSG00000164078 27 0.851 - 0.851 macrophage stimulating 1 receptor [Source:HGNC Symbol;Acc:HGNC:7381]
21. ZAN ENSG00000146839 18 0.851 - 0.851 zonadhesin (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:12857]
22. MATN1-AS1 ENSG00000186056 52 0.849 - 0.849 MATN1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40364]
23. DNAJB7 ENSG00000172404 9 0.845 - 0.845 DnaJ heat shock protein family (Hsp40) member B7 [Source:HGNC Symbol;Acc:HGNC:24986]
24. MAT1A ENSG00000151224 13 0.833 0.833 - methionine adenosyltransferase 1A [Source:HGNC Symbol;Acc:HGNC:6903]
25. SIDT1 ENSG00000072858 29 0.829 - 0.829 SID1 transmembrane family member 1 [Source:HGNC Symbol;Acc:HGNC:25967]
26. LOC442028 5 0.828 0.828 - uncharacterized LOC442028
27. LOC101929592 5 0.828 0.828 - uncharacterized LOC101929592
28. THSD4-AS2 6 0.828 0.828 - THSD4 antisense RNA 2
29. LOC151475 6 0.828 0.828 - uncharacterized LOC151475
30. LINC01024 8 0.828 0.828 - long intergenic non-protein coding RNA 1024, transcript variant 3
31. BOLA2B ENSG00000169627 9 0.828 0.828 - bolA family member 2B [Source:HGNC Symbol;Acc:HGNC:32479]
32. ITGAX ENSG00000140678 10 0.828 0.828 - integrin subunit alpha X [Source:HGNC Symbol;Acc:HGNC:6152]
33. LOC101927058 7 0.828 0.828 - uncharacterized LOC101927058
34. LINC00857 ENSG00000237523 22 0.828 0.828 - long intergenic non-protein coding RNA 857 [Source:HGNC Symbol;Acc:HGNC:45114]
35. ACOT12 ENSG00000172497 6 0.828 0.828 - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
36. YIPF7 ENSG00000177752 26 0.828 0.828 - Yip1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:26825]
37. CST5 ENSG00000170367 7 0.798 0.798 - cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]
38. OXGR1 ENSG00000165621 21 0.794 - 0.794 oxoglutarate receptor 1 [Source:HGNC Symbol;Acc:HGNC:4531]
39. SLC22A18AS ENSG00000254827, ENSG00000274454 16 0.793 - 0.793 solute carrier family 22 member 18 antisense [Source:HGNC Symbol;Acc:HGNC:10965]
40. CCL28 ENSG00000151882 54 0.791 0.791 - C-C motif chemokine ligand 28 [Source:HGNC Symbol;Acc:HGNC:17700]
41. ABI3BP ENSG00000154175 20 0.79 - 0.790 ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
42. CHRNA9 ENSG00000174343 91 0.787 - 0.787 cholinergic receptor nicotinic alpha 9 subunit [Source:HGNC Symbol;Acc:HGNC:14079]
43. C3orf49 ENSG00000163632 6 0.782 0.782 - chromosome 3 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:25190]
44. MAP1LC3B2 ENSG00000258102 55 0.781 - 0.781 microtubule associated protein 1 light chain 3 beta 2 [Source:HGNC Symbol;Acc:HGNC:34390]
45. AATK-AS1 7 0.781 0.781 - AATK antisense RNA 1
46. LINC00511 ENSG00000227036 19 0.779 0.779 - long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]
47. FAM209B ENSG00000213714 20 0.774 - 0.774 family with sequence similarity 209 member B [Source:HGNC Symbol;Acc:HGNC:16101]
48. HAR1B ENSG00000231133 11 0.773 - 0.773 highly accelerated region 1B [Source:HGNC Symbol;Acc:HGNC:33118]
49. CYP51A1-AS1 ENSG00000188693 15 0.773 - 0.773 CYP51A1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50694]
50. SPG20-AS1 11 0.771 0.771 - SPG20 antisense RNA 1, transcript variant 2
51. NR4A2 ENSG00000153234 48 0.768 - 0.768 nuclear receptor subfamily 4 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7981]
52. PP14571 24 0.764 - 0.764 uncharacterized LOC100130449
53. HIATL2 HIATL2 53 0.759 - 0.759
54. MIR155HG ENSG00000234883 33 0.754 - 0.754 MIR155 host gene [Source:HGNC Symbol;Acc:HGNC:35460]
55. SLC38A4 ENSG00000139209 129 0.753 - 0.753 solute carrier family 38 member 4 [Source:HGNC Symbol;Acc:HGNC:14679]
56. TBX15 ENSG00000092607 34 0.752 0.752 - T-box 15 [Source:HGNC Symbol;Acc:HGNC:11594]
57. MRGPRF-AS1 ENSG00000256508 35 0.746 - 0.746 MRGPRF antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51140]
58. ZBP1 ENSG00000124256 40 0.746 - 0.746 Z-DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:16176]
59. RPL32 ENSG00000144713 110817 0.745 0.745 - ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
60. LINC01144 ENSG00000281912 320 0.742 - 0.742 long intergenic non-protein coding RNA 1144 [Source:HGNC Symbol;Acc:HGNC:49460]
61. LINC00629 ENSG00000227060 74 0.74 0.740 - long intergenic non-protein coding RNA 629 [Source:HGNC Symbol;Acc:HGNC:44262]
62. ATE1-AS1 ENSG00000226864 39 0.739 - 0.739 ATE1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49496]
63. LHFPL3-AS2 ENSG00000225329 87 0.737 - 0.737 LHFPL3 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:44106]
64. MOCOS ENSG00000075643 106 0.736 - 0.736 molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
65. SLC16A1-AS1 ENSG00000226419 68 0.735 - 0.735 SLC16A1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49445]
66. ANXA2R ENSG00000177721 34 0.733 0.733 - annexin A2 receptor [Source:HGNC Symbol;Acc:HGNC:33463]
67. TMEM169 ENSG00000163449 610 0.732 - 0.732 transmembrane protein 169 [Source:HGNC Symbol;Acc:HGNC:25130]
68. BMPR1B-AS1 28 0.73 0.730 - BMPR1B antisense RNA 1 (head to head)
69. F10-AS1 ENSG00000231882 9 0.729 0.729 - F10 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40225]
70. LOC101926944 18 0.724 0.724 - uncharacterized LOC101926944
71. LINC00626 ENSG00000225826 44 0.722 0.722 - long intergenic non-protein coding RNA 626 [Source:HGNC Symbol;Acc:HGNC:44257]
72. KMO ENSG00000117009 21 0.721 - 0.721 kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
73. GABRA4 ENSG00000109158 43 0.721 0.721 - gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
74. SOCS4 ENSG00000180008 1745 0.721 - 0.721 suppressor of cytokine signaling 4 [Source:HGNC Symbol;Acc:HGNC:19392]
75. JPX ENSG00000225470 265 0.719 - 0.719 JPX transcript, XIST activator [Source:HGNC Symbol;Acc:HGNC:37191]
76. SCGB3A1 ENSG00000161055 21 0.717 0.717 - secretoglobin family 3A member 1 [Source:HGNC Symbol;Acc:HGNC:18384]
77. LAX1 ENSG00000122188 69 0.716 - 0.716 lymphocyte transmembrane adaptor 1 [Source:HGNC Symbol;Acc:HGNC:26005]
78. MOCS2 ENSG00000164172 788 0.716 - 0.716 molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
79. SLC35G1 ENSG00000176273 60 0.715 0.715 - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
80. SDR16C5 ENSG00000170786 8 0.711 0.711 - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
81. FLJ43879 41 0.711 - 0.711 FLJ43879 protein
82. PWRN2 ENSG00000260551 12 0.71 0.710 - Prader-Willi region non-protein coding RNA 2 [Source:HGNC Symbol;Acc:HGNC:33236]
83. KCNF1 ENSG00000162975 46 0.709 0.709 - potassium voltage-gated channel modifier subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:6246]
84. KCNJ13 ENSG00000115474 12 0.707 0.707 - potassium voltage-gated channel subfamily J member 13 [Source:HGNC Symbol;Acc:HGNC:6259]
85. LINC00341 256 0.707 0.707 - long intergenic non-protein coding RNA 341
86. LINC00540 ENSG00000276476 59 0.704 0.704 - long intergenic non-protein coding RNA 540 [Source:NCBI gene;Acc:100506622]
87. WISP1 ENSG00000104415 414 0.703 0.703 - WNT1 inducible signaling pathway protein 1 [Source:HGNC Symbol;Acc:HGNC:12769]
88. LOC102546226 12 0.702 - 0.702 uncharacterized LOC102546226
89. LOC100132891 LOC100132891 23 0.702 0.702 -
90. EFCAB5 ENSG00000176927 14 0.701 0.701 - EF-hand calcium binding domain 5 [Source:HGNC Symbol;Acc:HGNC:24801]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA