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Results for SPG20-AS1

Gene Name Gene ID Reads Annotation
SPG20-AS1 11 SPG20 antisense RNA 1, transcript variant 2



Genes with expression patterns similar to SPG20-AS1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SPG20-AS1 11 2 1.000 1.000 SPG20 antisense RNA 1, transcript variant 2
2. LOC101927058 7 0.916 0.916 - uncharacterized LOC101927058
3. ACOT12 ENSG00000172497 6 0.916 0.916 - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
4. LINC00857 ENSG00000237523 22 0.916 0.916 - long intergenic non-protein coding RNA 857 [Source:HGNC Symbol;Acc:HGNC:45114]
5. YIPF7 ENSG00000177752 26 0.916 0.916 - Yip1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:26825]
6. LINC01024 8 0.916 0.916 - long intergenic non-protein coding RNA 1024, transcript variant 3
7. THSD4-AS2 6 0.916 0.916 - THSD4 antisense RNA 2
8. LOC151475 6 0.916 0.916 - uncharacterized LOC151475
9. LOC442028 5 0.916 0.916 - uncharacterized LOC442028
10. LOC101929592 5 0.916 0.916 - uncharacterized LOC101929592
11. BOLA2B ENSG00000169627 9 0.916 0.916 - bolA family member 2B [Source:HGNC Symbol;Acc:HGNC:32479]
12. GABRA4 ENSG00000109158 43 0.916 0.916 - gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
13. ITGAX ENSG00000140678 10 0.916 0.916 - integrin subunit alpha X [Source:HGNC Symbol;Acc:HGNC:6152]
14. CST5 ENSG00000170367 7 0.887 0.887 - cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]
15. LOC101927157 22 0.882 0.882 - uncharacterized LOC101927157
16. C3orf49 ENSG00000163632 6 0.871 0.871 - chromosome 3 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:25190]
17. AATK-AS1 7 0.87 0.870 - AATK antisense RNA 1
18. LINC00511 ENSG00000227036 19 0.839 0.839 - long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]
19. LILRB4 ENSG00000186818, ENSG00000275730, ENSG00000276042, ENSG00000278279, ENSG00000278555 19 0.834 0.834 - leukocyte immunoglobulin like receptor B4 [Source:HGNC Symbol;Acc:HGNC:6608]
20. SLC35G1 ENSG00000176273 60 0.82 0.820 - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
21. F10-AS1 ENSG00000231882 9 0.815 0.815 - F10 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40225]
22. PLCXD1_1 ENSG00000182378 2 0.811 - 0.811 phosphatidylinositol specific phospholipase C X domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23148]
23. KCNF1 ENSG00000162975 46 0.804 0.804 - potassium voltage-gated channel modifier subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:6246]
24. RPL32 ENSG00000144713 110817 0.804 0.804 - ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
25. SDR16C5 ENSG00000170786 8 0.8 0.800 - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
26. ANXA2R ENSG00000177721 34 0.799 0.799 - annexin A2 receptor [Source:HGNC Symbol;Acc:HGNC:33463]
27. KCNJ13 ENSG00000115474 12 0.798 0.798 - potassium voltage-gated channel subfamily J member 13 [Source:HGNC Symbol;Acc:HGNC:6259]
28. LINC00629 ENSG00000227060 74 0.793 0.793 - long intergenic non-protein coding RNA 629 [Source:HGNC Symbol;Acc:HGNC:44262]
29. LINC00540 ENSG00000276476 59 0.792 0.792 - long intergenic non-protein coding RNA 540 [Source:NCBI gene;Acc:100506622]
30. LOC100508046 11 0.791 0.791 - uncharacterized LOC100508046
31. TNFRSF6B ENSG00000243509 2 0.791 - 0.791 TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
32. UBA7 ENSG00000182179 233 0.789 0.789 - ubiquitin like modifier activating enzyme 7 [Source:HGNC Symbol;Acc:HGNC:12471]
33. EFCAB5 ENSG00000176927 14 0.785 0.785 - EF-hand calcium binding domain 5 [Source:HGNC Symbol;Acc:HGNC:24801]
34. C1QL2 ENSG00000144119 4 0.777 - 0.777 complement C1q like 2 [Source:HGNC Symbol;Acc:HGNC:24181]
35. SNHG4 ENSG00000281398 9 0.777 - 0.777 small nucleolar RNA host gene 4 [Source:HGNC Symbol;Acc:HGNC:32964]
36. LOC101929162 4 0.777 - 0.777 uncharacterized LOC101929162
37. NUDT17 ENSG00000186364 4 0.777 - 0.777 nudix hydrolase 17 [Source:HGNC Symbol;Acc:HGNC:26618]
38. BTNL8 ENSG00000113303 7 0.777 - 0.777 butyrophilin like 8 [Source:HGNC Symbol;Acc:HGNC:26131]
39. GUCA2A ENSG00000197273 3 0.777 - 0.777 guanylate cyclase activator 2A [Source:HGNC Symbol;Acc:HGNC:4682]
40. LOC101928358 2 0.777 - 0.777 uncharacterized LOC101928358
41. VAX1 ENSG00000148704 13 0.775 - 0.775 ventral anterior homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12660]
42. STXBP5-AS1 ENSG00000233452 28 0.775 0.775 - STXBP5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44183]
43. NUTM2D ENSG00000214562 24 0.774 0.774 - NUT family member 2D [Source:HGNC Symbol;Acc:HGNC:23447]
44. LINC00626 ENSG00000225826 44 0.773 0.773 - long intergenic non-protein coding RNA 626 [Source:HGNC Symbol;Acc:HGNC:44257]
45. LOC150935 11 0.772 - 0.772 uncharacterized LOC150935
46. SYDE2 ENSG00000097096 64 0.771 0.771 - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
47. DPH1 ENSG00000108963 2 0.769 - 0.769 diphthamide biosynthesis 1 [Source:HGNC Symbol;Acc:HGNC:3003]
48. C11orf94 ENSG00000234776 6 0.769 - 0.769 chromosome 11 open reading frame 94 [Source:HGNC Symbol;Acc:HGNC:37213]
49. ADAMTSL4 ENSG00000143382 29 0.767 0.767 - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
50. LINC00906 ENSG00000267339 8 0.765 - 0.765 long intergenic non-protein coding RNA 906 [Source:HGNC Symbol;Acc:HGNC:27121]
51. LOC101928708 2 0.765 - 0.765 uncharacterized LOC101928708
52. LINC01108 ENSG00000226673 9 0.765 - 0.765 long intergenic non-protein coding RNA 1108 [Source:HGNC Symbol;Acc:HGNC:49234]
53. LINC01393 ENSG00000225535 17 0.763 0.763 - long intergenic non-protein coding RNA 1393 [Source:HGNC Symbol;Acc:HGNC:50669]
54. DNAJC7 ENSG00000168259 132 0.762 0.762 - DnaJ heat shock protein family (Hsp40) member C7 [Source:HGNC Symbol;Acc:HGNC:12392]
55. CCL28 ENSG00000151882 54 0.762 0.762 - C-C motif chemokine ligand 28 [Source:HGNC Symbol;Acc:HGNC:17700]
56. LY86-AS1 ENSG00000216863 25 0.757 0.757 - LY86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26593]
57. ANKRD26P1 ENSG00000261239 12 0.757 0.757 - ankyrin repeat domain 26 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:32955]
58. C11orf45 ENSG00000174370 16 0.753 - 0.753 chromosome 11 open reading frame 45 [Source:HGNC Symbol;Acc:HGNC:28584]
59. CCDC114 ENSG00000105479 34 0.752 0.752 - coiled-coil domain containing 114 [Source:HGNC Symbol;Acc:HGNC:26560]
60. TERC ENSG00000270141 167 0.75 0.750 - telomerase RNA component [Source:HGNC Symbol;Acc:HGNC:11727]
61. HERC2P4 ENSG00000230267 17 0.748 0.748 - hect domain and RLD 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:4872]
62. MAT1A ENSG00000151224 13 0.743 0.743 - methionine adenosyltransferase 1A [Source:HGNC Symbol;Acc:HGNC:6903]
63. NAMA ENSG00000271086 11 0.743 0.743 - non-protein coding RNA, associated with MAP kinase pathway and growth arrest [Source:NCBI gene;Acc:100996569]
64. TNFRSF10C ENSG00000173535 15 0.74 - 0.740 TNF receptor superfamily member 10c [Source:HGNC Symbol;Acc:HGNC:11906]
65. CTAGE8 ENSG00000244693, ENSG00000285175 9 0.736 0.736 - CTAGE family member 8 [Source:HGNC Symbol;Acc:HGNC:37294]
66. STK4-AS1 ENSG00000227477 7 0.732 - 0.732 STK4 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:43811]
67. LINC00885 ENSG00000224652 6 0.732 - 0.732 long intergenic non-protein coding RNA 885 [Source:HGNC Symbol;Acc:HGNC:48571]
68. HTR7 ENSG00000148680 58 0.73 0.730 - 5-hydroxytryptamine receptor 7 [Source:HGNC Symbol;Acc:HGNC:5302]
69. GP5 ENSG00000178732 2 0.729 - 0.729 glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
70. TBX15 ENSG00000092607 34 0.729 0.729 - T-box 15 [Source:HGNC Symbol;Acc:HGNC:11594]
71. PSMC4 ENSG00000013275, ENSG00000281221 6978 0.723 0.723 - proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551]
72. LOC286059 7 0.723 - 0.723 tumor necrosis factor receptor superfamily member 10d, decoy with truncated death domain pseudogene
73. UBA1 ENSG00000130985 20298 0.722 0.722 - ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
74. FUT1 ENSG00000174951 49 0.72 0.720 - fucosyltransferase 1 (H blood group) [Source:HGNC Symbol;Acc:HGNC:4012]
75. TMSB10 ENSG00000034510 51966 0.718 0.718 - thymosin beta 10 [Source:HGNC Symbol;Acc:HGNC:11879]
76. ZNF341-AS1 ENSG00000230753 5 0.718 - 0.718 ZNF341 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50736]
77. ZNF724P 11 0.716 - 0.716 zinc finger protein 724, pseudogene
78. LOC101929767 894 0.714 0.714 - uncharacterized LOC101929767
79. ALDH1L2 ENSG00000136010 17 0.714 0.714 - aldehyde dehydrogenase 1 family member L2 [Source:HGNC Symbol;Acc:HGNC:26777]
80. CPNE9 ENSG00000144550 23 0.714 0.714 - copine family member 9 [Source:HGNC Symbol;Acc:HGNC:24336]
81. TRAPPC1 ENSG00000170043 3295 0.713 0.713 - trafficking protein particle complex 1 [Source:HGNC Symbol;Acc:HGNC:19894]
82. LTB4R ENSG00000213903, ENSG00000285456 125 0.711 0.711 - leukotriene B4 receptor [Source:HGNC Symbol;Acc:HGNC:6713]
83. LOC100132891 LOC100132891 23 0.71 0.710 -
84. TCP11 ENSG00000124678 34 0.71 0.710 - t-complex 11 [Source:HGNC Symbol;Acc:HGNC:11658]
85. LINC00341 256 0.708 0.708 - long intergenic non-protein coding RNA 341
86. LOC100506136 34 0.708 0.708 - uncharacterized LOC100506136
87. HNRNPA1P33 ENSG00000213412 13 0.708 0.708 - heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 [Source:HGNC Symbol;Acc:HGNC:44990]
88. GPR61 ENSG00000156097 2 0.706 - 0.706 G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
89. LOC101926944 18 0.703 0.703 - uncharacterized LOC101926944
90. FAM136A ENSG00000035141 3827 0.702 0.702 - family with sequence similarity 136 member A [Source:HGNC Symbol;Acc:HGNC:25911]
91. S100A2 ENSG00000196754 7 0.702 - 0.702 S100 calcium binding protein A2 [Source:HGNC Symbol;Acc:HGNC:10492]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA