Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00599

Gene Name Gene ID Reads Annotation
LINC00599 ENSG00000253230, ENSG00000284859 293 long intergenic non-protein coding RNA 599 [Source:HGNC Symbol;Acc:HGNC:27231]



Genes with expression patterns similar to LINC00599

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00599 ENSG00000253230, ENSG00000284859 293 2 1.000 1.000 long intergenic non-protein coding RNA 599 [Source:HGNC Symbol;Acc:HGNC:27231]
2. KLHL35 ENSG00000149243 877 1.715 0.886 0.829 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
3. CNTN2 ENSG00000184144 4674 1.699 0.883 0.816 contactin 2 [Source:HGNC Symbol;Acc:HGNC:2172]
4. DPYSL3 ENSG00000113657 7319 1.688 0.884 0.804 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
5. TUBB2B ENSG00000137285 35642 1.659 0.906 0.753 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
6. MAP1B ENSG00000131711 44568 1.658 0.894 0.764 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
7. TAGLN3 ENSG00000144834 10185 1.654 0.874 0.780 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
8. MAP2 ENSG00000078018 3573 1.643 0.894 0.749 microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
9. ELAVL3 ENSG00000196361 2164 1.624 0.821 0.803 ELAV like RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3314]
10. ST18 ENSG00000147488 547 1.623 0.807 0.816 ST18, C2H2C-type zinc finger [Source:HGNC Symbol;Acc:HGNC:18695]
11. TUBB3 ENSG00000258947 53998 1.62 0.878 0.742 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
12. SRRM4 ENSG00000139767 1060 1.618 0.791 0.827 serine/arginine repetitive matrix 4 [Source:HGNC Symbol;Acc:HGNC:29389]
13. TUBA1A ENSG00000167552 83799 1.615 0.873 0.742 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
14. LOC101929563 1404 1.612 0.837 0.775 uncharacterized LOC101929563
15. NCAN ENSG00000130287 1136 1.611 0.802 0.809 neurocan [Source:HGNC Symbol;Acc:HGNC:2465]
16. CRMP1 ENSG00000072832 9692 1.607 0.870 0.737 collapsin response mediator protein 1 [Source:HGNC Symbol;Acc:HGNC:2365]
17. DPYSL5 ENSG00000157851 6855 1.606 0.802 0.804 dihydropyrimidinase like 5 [Source:HGNC Symbol;Acc:HGNC:20637]
18. CPLX2 ENSG00000145920 573 1.602 0.825 0.777 complexin 2 [Source:HGNC Symbol;Acc:HGNC:2310]
19. PHF21B ENSG00000056487 2704 1.599 0.853 0.746 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
20. HOXC9 ENSG00000180806 3191 1.598 0.758 0.840 homeobox C9 [Source:HGNC Symbol;Acc:HGNC:5130]
21. CALM1 ENSG00000198668 24434 1.596 0.861 0.735 calmodulin 1 [Source:HGNC Symbol;Acc:HGNC:1442]
22. CALCB ENSG00000175868 1967 1.595 0.805 0.790 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]
23. ELAVL4 ENSG00000162374 5082 1.595 0.858 0.737 ELAV like RNA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:3315]
24. DPYSL2 ENSG00000092964 47074 1.588 0.872 0.716 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
25. NHLH1 ENSG00000171786 4811 1.587 0.778 0.809 nescient helix-loop-helix 1 [Source:HGNC Symbol;Acc:HGNC:7817]
26. NHLH2 ENSG00000177551 1191 1.586 0.788 0.798 nescient helix-loop-helix 2 [Source:HGNC Symbol;Acc:HGNC:7818]
27. CXCR4 ENSG00000121966 4708 1.578 0.835 0.743 C-X-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:2561]
28. APC2 ENSG00000115266 1420 1.574 0.828 0.746 APC2, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:24036]
29. MAP6 ENSG00000171533 1692 1.565 0.813 0.752 microtubule associated protein 6 [Source:HGNC Symbol;Acc:HGNC:6868]
30. KIF1A ENSG00000130294 2920 1.563 0.845 0.718 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
31. STMN4 ENSG00000015592 748 1.563 0.845 0.718 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
32. MIAT ENSG00000225783 2977 1.56 0.745 0.815 myocardial infarction associated transcript [Source:HGNC Symbol;Acc:HGNC:33425]
33. SCG3 ENSG00000104112 681 1.557 0.810 0.747 secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]
34. BSN ENSG00000164061 737 1.544 0.791 0.753 bassoon presynaptic cytomatrix protein [Source:HGNC Symbol;Acc:HGNC:1117]
35. ENO2 ENSG00000111674 2931 1.543 0.806 0.737 enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
36. SCRT1 ENSG00000261678, ENSG00000284923 207 1.537 0.775 0.762 scratch family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:15950]
37. OLFM1 ENSG00000130558 1162 1.524 0.810 0.714 olfactomedin 1 [Source:HGNC Symbol;Acc:HGNC:17187]
38. GNG3 ENSG00000162188 958 1.521 0.750 0.771 G protein subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:4405]
39. PRDM8 ENSG00000152784 1304 1.52 0.716 0.804 PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
40. STMN3 ENSG00000197457 2808 1.518 0.770 0.748 stathmin 3 [Source:HGNC Symbol;Acc:HGNC:15926]
41. FAM219A ENSG00000164970 1747 1.508 0.752 0.756 family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
42. SCRT2 ENSG00000215397 343 1.5 0.728 0.772 scratch family transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:15952]
43. CAMKV ENSG00000164076 400 1.496 0.726 0.770 CaM kinase like vesicle associated [Source:HGNC Symbol;Acc:HGNC:28788]
44. SYT11 ENSG00000132718 3832 1.492 0.775 0.717 synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239]
45. CELSR2 ENSG00000143126 3566 1.491 0.722 0.769 cadherin EGF LAG seven-pass G-type receptor 2 [Source:HGNC Symbol;Acc:HGNC:3231]
46. KLHDC8A ENSG00000162873 2265 1.489 0.712 0.777 kelch domain containing 8A [Source:HGNC Symbol;Acc:HGNC:25573]
47. COTL1 ENSG00000103187 30280 1.472 0.737 0.735 coactosin like F-actin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:18304]
48. Sep-03 Sep-03 2608 1.468 0.767 0.701
49. BRSK2 ENSG00000174672 282 1.452 0.720 0.732 BR serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:11405]
50. CKB ENSG00000166165 54181 1.451 0.716 0.735 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
51. JAM2 ENSG00000154721 1771 1.447 0.709 0.738 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:14686]
52. PCSK2 ENSG00000125851 3112 1.445 0.720 0.725 proprotein convertase subtilisin/kexin type 2 [Source:HGNC Symbol;Acc:HGNC:8744]
53. NES ENSG00000132688 20034 1.442 0.703 0.739 nestin [Source:HGNC Symbol;Acc:HGNC:7756]
54. BCAR3 ENSG00000137936 2774 1.429 0.713 0.716 BCAR3, NSP family adaptor protein [Source:HGNC Symbol;Acc:HGNC:973]
55. NEUROG2 ENSG00000178403 514 1.428 0.725 0.703 neurogenin 2 [Source:HGNC Symbol;Acc:HGNC:13805]
56. SYT4 ENSG00000132872 928 0.873 0.873 - synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
57. CADPS ENSG00000163618 1353 0.871 0.871 - calcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]
58. TUBB2A ENSG00000137267 4508 0.867 0.867 - tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
59. GDAP1L1 ENSG00000124194 1388 0.856 0.856 - ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
60. MLLT11 ENSG00000213190 18099 0.856 0.856 - MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
61. INA ENSG00000148798 12811 0.854 0.854 - internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
62. GDI1 ENSG00000203879 6108 0.852 0.852 - GDP dissociation inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:4226]
63. TMEM176A ENSG00000002933 854 0.846 - 0.846 transmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]
64. MYT1 ENSG00000196132, ENSG00000276876 1089 0.844 0.844 - myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
65. DCLK1 ENSG00000133083 1008 0.841 0.841 - doublecortin like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2700]
66. SYT1 ENSG00000067715 4379 0.84 0.840 - synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]
67. GNG2 ENSG00000186469 5596 0.836 0.836 - G protein subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:4404]
68. AKAP6 ENSG00000151320 580 0.833 0.833 - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
69. STMN2 ENSG00000104435 16286 0.832 0.832 - stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
70. ELAVL2 ENSG00000107105 5067 0.831 0.831 - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
71. FEZ1 ENSG00000149557 1181 0.831 0.831 - fasciculation and elongation protein zeta 1 [Source:HGNC Symbol;Acc:HGNC:3659]
72. CDK5R1 ENSG00000176749 4151 0.828 0.828 - cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
73. NKAIN3 ENSG00000185942 2284 0.828 0.828 - sodium/potassium transporting ATPase interacting 3 [Source:HGNC Symbol;Acc:HGNC:26829]
74. ONECUT2 ENSG00000119547 3914 0.826 0.826 - one cut homeobox 2 [Source:HGNC Symbol;Acc:HGNC:8139]
75. RTN1 ENSG00000139970 4545 0.825 0.825 - reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
76. ATP6V1G2 ENSG00000206445, ENSG00000213760, ENSG00000226850, ENSG00000227587, ENSG00000230900, ENSG00000234668, ENSG00000234920 2106 0.823 0.823 - ATPase H+ transporting V1 subunit G2 [Source:HGNC Symbol;Acc:HGNC:862]
77. BEX1 ENSG00000133169 38008 0.818 0.818 - brain expressed X-linked 1 [Source:HGNC Symbol;Acc:HGNC:1036]
78. GAP43 ENSG00000172020 9990 0.816 0.816 - growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]
79. KIF21B ENSG00000116852 3406 0.814 0.814 - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
80. TMEM176B ENSG00000106565 1876 0.814 - 0.814 transmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]
81. PNMA2 ENSG00000240694 835 0.812 0.812 - PNMA family member 2 [Source:HGNC Symbol;Acc:HGNC:9159]
82. SST ENSG00000157005 12887 0.811 0.811 - somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
83. TMTC4 ENSG00000125247 21623 0.808 0.808 - transmembrane and tetratricopeptide repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:25904]
84. POU2F2 ENSG00000028277 2245 0.807 0.807 - POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9213]
85. HMP19 643 0.806 0.806 - HMP19 protein
86. CALM2 ENSG00000143933 43735 0.806 0.806 - calmodulin 2 [Source:HGNC Symbol;Acc:HGNC:1445]
87. NOVA1 ENSG00000139910 5990 0.803 - 0.803 NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]
88. RUNDC3A ENSG00000108309 522 0.801 0.801 - RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
89. UCHL1 ENSG00000154277 28345 0.801 0.801 - ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513]
90. KIF5C ENSG00000168280, ENSG00000276734 1294 0.798 0.798 - kinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]
91. PKIA ENSG00000171033 3637 0.798 0.798 - cAMP-dependent protein kinase inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:9017]
92. ATP1A3 ENSG00000105409 428 0.796 0.796 - ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
93. DCX ENSG00000077279 9569 0.796 0.796 - doublecortin [Source:HGNC Symbol;Acc:HGNC:2714]
94. SNCG ENSG00000173267 1866 0.796 0.796 - synuclein gamma [Source:HGNC Symbol;Acc:HGNC:11141]
95. TPD52 ENSG00000076554 1023 0.795 0.795 - tumor protein D52 [Source:HGNC Symbol;Acc:HGNC:12005]
96. SNAP25 ENSG00000132639 1533 0.792 0.792 - synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]
97. ISL1 ENSG00000016082 4314 0.788 0.788 - ISL LIM homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6132]
98. ACOT7 ENSG00000097021 9034 0.785 0.785 - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
99. PDLIM1 ENSG00000107438 11977 0.784 0.784 - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
100. FAM19A5 ENSG00000219438 1353 0.781 0.781 - family with sequence similarity 19 member A5, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21592]

There are 140 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA