Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LHX4

Gene Name Gene ID Reads Annotation
LHX4 ENSG00000121454 20 LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]



Genes with expression patterns similar to LHX4

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LHX4 ENSG00000121454 20 2 1.000 1.000 LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]
2. GAP43 ENSG00000172020 9990 0.872 - 0.872 growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]
3. NEFL ENSG00000277586 6204 0.869 - 0.869 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
4. ARHGAP36 ENSG00000147256 614 0.866 - 0.866 Rho GTPase activating protein 36 [Source:HGNC Symbol;Acc:HGNC:26388]
5. SST ENSG00000157005 12887 0.863 - 0.863 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
6. PDLIM1 ENSG00000107438 11977 0.846 - 0.846 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
7. ISLR2 ENSG00000167178 161 0.841 - 0.841 immunoglobulin superfamily containing leucine rich repeat 2 [Source:HGNC Symbol;Acc:HGNC:29286]
8. CRISP1 ENSG00000124812 9 0.835 0.835 - cysteine rich secretory protein 1 [Source:HGNC Symbol;Acc:HGNC:304]
9. LINC01247 ENSG00000227007 4 0.835 0.835 - long intergenic non-protein coding RNA 1247 [Source:HGNC Symbol;Acc:HGNC:49841]
10. NEFM ENSG00000104722 6565 0.831 - 0.831 neurofilament medium [Source:HGNC Symbol;Acc:HGNC:7734]
11. STMN2 ENSG00000104435 16286 0.827 - 0.827 stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
12. SV2C ENSG00000122012 837 0.82 - 0.820 synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
13. RTN1 ENSG00000139970 4545 0.818 - 0.818 reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
14. SYT4 ENSG00000132872 928 0.813 - 0.813 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
15. SCN3A ENSG00000153253 621 0.812 - 0.812 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
16. GDAP1L1 ENSG00000124194 1388 0.811 - 0.811 ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
17. GNAO1 ENSG00000087258 567 0.811 - 0.811 G protein subunit alpha o1 [Source:HGNC Symbol;Acc:HGNC:4389]
18. ECEL1 ENSG00000171551 286 0.807 - 0.807 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
19. NDUFA4L2 ENSG00000185633 8 0.806 0.806 - NDUFA4, mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]
20. MAPT ENSG00000186868, ENSG00000276155, ENSG00000277956 1829 0.804 - 0.804 microtubule associated protein tau [Source:HGNC Symbol;Acc:HGNC:6893]
21. ATP1A3 ENSG00000105409 428 0.794 - 0.794 ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
22. LRRC73 ENSG00000204052 16 0.792 - 0.792 leucine rich repeat containing 73 [Source:HGNC Symbol;Acc:HGNC:21375]
23. BLACAT1 ENSG00000281406 57 0.79 - 0.790 bladder cancer associated transcript 1 [Source:HGNC Symbol;Acc:HGNC:48597]
24. RBFOX3 ENSG00000167281 329 0.788 - 0.788 RNA binding fox-1 homolog 3 [Source:HGNC Symbol;Acc:HGNC:27097]
25. CDK5R1 ENSG00000176749 4151 0.787 - 0.787 cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
26. SLC26A9 ENSG00000174502 8 0.786 0.786 - solute carrier family 26 member 9 [Source:HGNC Symbol;Acc:HGNC:14469]
27. ATP6V1G2 ENSG00000206445, ENSG00000213760, ENSG00000226850, ENSG00000227587, ENSG00000230900, ENSG00000234668, ENSG00000234920 2106 0.785 - 0.785 ATPase H+ transporting V1 subunit G2 [Source:HGNC Symbol;Acc:HGNC:862]
28. C11orf87 ENSG00000185742 68 0.781 - 0.781 chromosome 11 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:33788]
29. SYP ENSG00000102003 170 0.781 - 0.781 synaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]
30. TUBB2A ENSG00000137267 4508 0.779 - 0.779 tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
31. MLLT11 ENSG00000213190 18099 0.778 - 0.778 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
32. MAPRE2 ENSG00000166974 5413 0.773 - 0.773 microtubule associated protein RP/EB family member 2 [Source:HGNC Symbol;Acc:HGNC:6891]
33. CHODL ENSG00000154645 212 0.771 - 0.771 chondrolectin [Source:HGNC Symbol;Acc:HGNC:17807]
34. RUNDC3B ENSG00000105784 261 0.768 - 0.768 RUN domain containing 3B [Source:HGNC Symbol;Acc:HGNC:30286]
35. INA ENSG00000148798 12811 0.767 - 0.767 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
36. C1orf61 ENSG00000125462 336 0.765 - 0.765 chromosome 1 open reading frame 61 [Source:HGNC Symbol;Acc:HGNC:30780]
37. SLC12A5 ENSG00000124140 39 0.764 - 0.764 solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]
38. NELL1 ENSG00000165973 2345 0.762 - 0.762 neural EGFL like 1 [Source:HGNC Symbol;Acc:HGNC:7750]
39. CDK5R2 ENSG00000171450 62 0.762 - 0.762 cyclin dependent kinase 5 regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:1776]
40. XKR4 ENSG00000206579 42 0.761 0.761 - XK related 4 [Source:HGNC Symbol;Acc:HGNC:29394]
41. GLRA2 ENSG00000101958 149 0.759 - 0.759 glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
42. RAB6B ENSG00000154917 1104 0.758 - 0.758 RAB6B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14902]
43. RUFY3 ENSG00000018189 4536 0.757 - 0.757 RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
44. CCDC184 ENSG00000177875 785 0.755 - 0.755 coiled-coil domain containing 184 [Source:HGNC Symbol;Acc:HGNC:33749]
45. CEND1 ENSG00000184524 300 0.754 - 0.754 cell cycle exit and neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:24153]
46. RET ENSG00000165731 339 0.754 - 0.754 ret proto-oncogene [Source:HGNC Symbol;Acc:HGNC:9967]
47. ATP11A-AS1 ENSG00000232684 10 0.753 0.753 - ATP11A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40645]
48. HECW1 ENSG00000002746 102 0.753 - 0.753 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
49. KIF5C ENSG00000168280, ENSG00000276734 1294 0.753 - 0.753 kinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]
50. REEP1 ENSG00000068615 2132 0.75 - 0.750 receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
51. CALY ENSG00000130643 78 0.746 - 0.746 calcyon neuron specific vesicular protein [Source:HGNC Symbol;Acc:HGNC:17938]
52. IRX6 ENSG00000159387 238 0.745 - 0.745 iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
53. RUNDC3A ENSG00000108309 522 0.744 - 0.744 RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
54. BASP1 ENSG00000176788 18176 0.742 - 0.742 brain abundant membrane attached signal protein 1 [Source:HGNC Symbol;Acc:HGNC:957]
55. HMP19 643 0.739 - 0.739 HMP19 protein
56. MYT1 ENSG00000196132, ENSG00000276876 1089 0.738 - 0.738 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
57. L1CAM ENSG00000198910 1652 0.737 - 0.737 L1 cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:6470]
58. SNCG ENSG00000173267 1866 0.736 - 0.736 synuclein gamma [Source:HGNC Symbol;Acc:HGNC:11141]
59. TUBB3 ENSG00000258947 53998 0.736 - 0.736 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
60. SYT5 ENSG00000129990 85 0.736 - 0.736 synaptotagmin 5 [Source:HGNC Symbol;Acc:HGNC:11513]
61. SEZ6L2 ENSG00000174938 1533 0.728 - 0.728 seizure related 6 homolog like 2 [Source:HGNC Symbol;Acc:HGNC:30844]
62. FXYD7 ENSG00000221946 253 0.728 - 0.728 FXYD domain containing ion transport regulator 7 [Source:HGNC Symbol;Acc:HGNC:4034]
63. GPX2 ENSG00000176153 6 0.725 - 0.725 glutathione peroxidase 2 [Source:HGNC Symbol;Acc:HGNC:4554]
64. ENO2 ENSG00000111674 2931 0.725 - 0.725 enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
65. LMO1 ENSG00000166407 258 0.719 - 0.719 LIM domain only 1 [Source:HGNC Symbol;Acc:HGNC:6641]
66. CDKN2D ENSG00000129355 839 0.719 - 0.719 cyclin dependent kinase inhibitor 2D [Source:HGNC Symbol;Acc:HGNC:1790]
67. RBP1 ENSG00000114115 35038 0.718 - 0.718 retinol binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9919]
68. MS4A6A ENSG00000110077 28 0.716 0.716 - membrane spanning 4-domains A6A [Source:HGNC Symbol;Acc:HGNC:13375]
69. HIST1H4I ENSG00000276180 4 0.716 0.716 - histone cluster 1 H4 family member i [Source:HGNC Symbol;Acc:HGNC:4793]
70. DCHS2 ENSG00000197410, ENSG00000284227 10 0.716 0.716 - dachsous cadherin-related 2 [Source:HGNC Symbol;Acc:HGNC:23111]
71. CSTA ENSG00000121552 14 0.716 0.716 - cystatin A [Source:HGNC Symbol;Acc:HGNC:2481]
72. TOP1P2 3 0.716 0.716 - topoisomerase (DNA) I pseudogene 2
73. LINC00539 ENSG00000224429 4 0.716 0.716 - long intergenic non-protein coding RNA 539 [Source:HGNC Symbol;Acc:HGNC:43672]
74. SPINK1 ENSG00000164266 34921 0.716 0.716 - serine peptidase inhibitor, Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]
75. OR13D1 ENSG00000179055 3 0.716 0.716 - olfactory receptor family 13 subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:14695]
76. MS4A14 ENSG00000166928 13 0.716 0.716 - membrane spanning 4-domains A14 [Source:HGNC Symbol;Acc:HGNC:30706]
77. KY ENSG00000174611 16 0.716 0.716 - kyphoscoliosis peptidase [Source:HGNC Symbol;Acc:HGNC:26576]
78. LOC100507156 7 0.716 0.716 - uncharacterized LOC100507156
79. LINC01126 ENSG00000279873 11 0.716 0.716 - long intergenic non-protein coding RNA 1126 [Source:HGNC Symbol;Acc:HGNC:49275]
80. LILRA3 ENSG00000273884, ENSG00000275841, ENSG00000276175, ENSG00000278046 3 0.716 0.716 - leukocyte immunoglobulin like receptor A3 [Source:HGNC Symbol;Acc:HGNC:6604]
81. KLK2 ENSG00000167751 3 0.716 0.716 - kallikrein related peptidase 2 [Source:HGNC Symbol;Acc:HGNC:6363]
82. LOC101927694 5 0.716 0.716 - uncharacterized LOC101927694
83. PID1 ENSG00000153823 649 0.716 - 0.716 phosphotyrosine interaction domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26084]
84. SLC2A14 ENSG00000173262 20 0.716 0.716 - solute carrier family 2 member 14 [Source:HGNC Symbol;Acc:HGNC:18301]
85. EPN2-AS1 ENSG00000235397 3 0.716 0.716 - EPN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40849]
86. GUCY1B2 ENSG00000123201 3 0.716 0.716 - guanylate cyclase 1 soluble subunit beta 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:4686]
87. IL2RA ENSG00000134460 3 0.716 0.716 - interleukin 2 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:6008]
88. KCTD4 ENSG00000180332 3 0.716 0.716 - potassium channel tetramerization domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23227]
89. PLCXD1 ENSG00000182378 4 0.716 0.716 - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23148]
90. IVL ENSG00000163207 3 0.716 0.716 - involucrin [Source:HGNC Symbol;Acc:HGNC:6187]
91. KRT12 ENSG00000187242, ENSG00000263243 3 0.716 0.716 - keratin 12 [Source:HGNC Symbol;Acc:HGNC:6414]
92. EFCAB10 ENSG00000185055 5 0.716 0.716 - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
93. CDH12 ENSG00000154162 181 0.714 - 0.714 cadherin 12 [Source:HGNC Symbol;Acc:HGNC:1751]
94. EPS8L1 ENSG00000131037 124 0.712 - 0.712 EPS8 like 1 [Source:HGNC Symbol;Acc:HGNC:21295]
95. CBLN2 ENSG00000141668 584 0.711 - 0.711 cerebellin 2 precursor [Source:HGNC Symbol;Acc:HGNC:1544]
96. LINC00957 ENSG00000235314 72 0.71 - 0.710 long intergenic non-protein coding RNA 957 [Source:HGNC Symbol;Acc:HGNC:22332]
97. SCN3B ENSG00000166257 491 0.71 - 0.710 sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
98. Mar-11 Mar-11 38 0.709 - 0.709
99. VSTM2A ENSG00000170419 227 0.709 - 0.709 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
100. TRIM36 ENSG00000152503 452 0.707 - 0.707 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]

There are 6 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA