Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXC-AS1

Gene Name Gene ID Reads Annotation
HOXC-AS1 ENSG00000250451 204 HOXC cluster antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:43749]



Genes with expression patterns similar to HOXC-AS1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. HOXC-AS1 ENSG00000250451 204 2 1.000 1.000 HOXC cluster antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:43749]
2. FAM181A ENSG00000140067, ENSG00000273533 1757 1.416 0.703 0.713 family with sequence similarity 181 member A [Source:HGNC Symbol;Acc:HGNC:20491]
3. RFX4 ENSG00000111783 1382 0.808 0.808 - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
4. ENKUR ENSG00000151023 106 0.785 0.785 - enkurin, TRPC channel interacting protein [Source:HGNC Symbol;Acc:HGNC:28388]
5. FZD10 ENSG00000111432 608 0.777 0.777 - frizzled class receptor 10 [Source:HGNC Symbol;Acc:HGNC:4039]
6. SYT2 ENSG00000143858 2364 0.777 0.777 - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
7. MSI1 ENSG00000135097 6935 0.773 0.773 - musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
8. SOX2 ENSG00000181449 19791 0.762 0.762 - SRY-box 2 [Source:HGNC Symbol;Acc:HGNC:11195]
9. LOC100240734 1898 0.758 0.758 - uncharacterized LOC100240734
10. ZIC1 ENSG00000152977 18260 0.758 0.758 - Zic family member 1 [Source:HGNC Symbol;Acc:HGNC:12872]
11. RND2 ENSG00000108830 3761 0.753 0.753 - Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]
12. LINC00461 ENSG00000245526 4465 0.749 0.749 - long intergenic non-protein coding RNA 461 [Source:HGNC Symbol;Acc:HGNC:42810]
13. FLJ12825 ENSG00000248265 822 0.748 - 0.748 uncharacterized LOC440101 [Source:NCBI gene;Acc:440101]
14. TKTL1 ENSG00000007350 1212 0.747 0.747 - transketolase like 1 [Source:HGNC Symbol;Acc:HGNC:11835]
15. CKB ENSG00000166165 54181 0.747 0.747 - creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
16. POU3F2 ENSG00000184486 2683 0.746 0.746 - POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215]
17. OLIG3 ENSG00000177468 918 0.74 0.740 - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
18. ZIC4 ENSG00000174963 2667 0.739 0.739 - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
19. AXIN2 ENSG00000168646 2778 0.736 0.736 - axin 2 [Source:HGNC Symbol;Acc:HGNC:904]
20. WNT7A ENSG00000154764 131 0.735 0.735 - Wnt family member 7A [Source:HGNC Symbol;Acc:HGNC:12786]
21. STAC ENSG00000144681 259 0.734 0.734 - SH3 and cysteine rich domain [Source:HGNC Symbol;Acc:HGNC:11353]
22. SOX3 ENSG00000134595 5297 0.732 0.732 - SRY-box 3 [Source:HGNC Symbol;Acc:HGNC:11199]
23. UCP2 ENSG00000175567 1141 0.731 - 0.731 uncoupling protein 2 [Source:HGNC Symbol;Acc:HGNC:12518]
24. WNT3A ENSG00000154342 267 0.731 0.731 - Wnt family member 3A [Source:HGNC Symbol;Acc:HGNC:15983]
25. TOX3 ENSG00000103460 1758 0.73 0.730 - TOX high mobility group box family member 3 [Source:HGNC Symbol;Acc:HGNC:11972]
26. SCUBE2 ENSG00000175356 1730 0.729 0.729 - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
27. WSCD1 ENSG00000179314 1121 0.729 0.729 - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
28. DCC ENSG00000187323 538 0.729 0.729 - DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]
29. TTYH1 ENSG00000167614, ENSG00000275650, ENSG00000276537, ENSG00000276887 2414 0.727 0.727 - tweety family member 1 [Source:HGNC Symbol;Acc:HGNC:13476]
30. SOX1 ENSG00000182968 1339 0.725 0.725 - SRY-box 1 [Source:HGNC Symbol;Acc:HGNC:11189]
31. PNMA2 ENSG00000240694 835 0.723 - 0.723 PNMA family member 2 [Source:HGNC Symbol;Acc:HGNC:9159]
32. SALL1 ENSG00000103449 458 0.722 0.722 - spalt like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10524]
33. CELSR1 ENSG00000075275 716 0.722 0.722 - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
34. ZIC2 ENSG00000043355 4457 0.721 0.721 - Zic family member 2 [Source:HGNC Symbol;Acc:HGNC:12873]
35. RNF165 ENSG00000141622 1865 0.719 - 0.719 ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
36. FGFR3 ENSG00000068078 2862 0.718 0.718 - fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:HGNC:3690]
37. NRIP3 ENSG00000175352 238 0.715 - 0.715 nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
38. ZIC5 ENSG00000139800 441 0.715 0.715 - Zic family member 5 [Source:HGNC Symbol;Acc:HGNC:20322]
39. SEMA5B ENSG00000082684 2716 0.712 0.712 - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
40. PCBD1 ENSG00000166228 4326 0.711 0.711 - pterin-4 alpha-carbinolamine dehydratase 1 [Source:HGNC Symbol;Acc:HGNC:8646]
41. ZIC3 ENSG00000156925 420 0.709 0.709 - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
42. HOXB2 ENSG00000173917 6040 0.705 0.705 - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
43. CRABP1 ENSG00000166426 2178 0.705 0.705 - cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]
44. HOXB-AS3 ENSG00000233101 1776 0.704 - 0.704 HOXB cluster antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40283]
45. LRRN1 ENSG00000175928 3973 0.704 0.704 - leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:HGNC:20980]
46. HES6 ENSG00000144485 4284 0.704 0.704 - hes family bHLH transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:18254]
47. WNT1 ENSG00000125084 1392 0.7 0.700 - Wnt family member 1 [Source:HGNC Symbol;Acc:HGNC:12774]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA