Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for COL3A1

Gene Name Gene ID Reads Annotation
COL3A1 ENSG00000168542 140021 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]



Genes with expression patterns similar to COL3A1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. COL3A1 ENSG00000168542 140021 2 1.000 1.000 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
2. SFRP1 ENSG00000104332 280077 1.807 0.926 0.881 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
3. BAMBI ENSG00000095739 2641 1.732 0.884 0.848 BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
4. GATA6 ENSG00000141448 3614 1.728 0.898 0.830 GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
5. IL6ST ENSG00000134352 9416 1.705 0.822 0.883 interleukin 6 signal transducer [Source:HGNC Symbol;Acc:HGNC:6021]
6. ROR1 ENSG00000185483 9648 1.702 0.918 0.784 receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
7. DSG2 ENSG00000046604 4179 1.664 0.837 0.827 desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
8. CNTN4 ENSG00000144619 2198 1.632 0.822 0.810 contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
9. FREM2 ENSG00000150893 3376 1.615 0.830 0.785 FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
10. NXPH2 ENSG00000144227 683 1.604 0.762 0.842 neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
11. SHISA3 ENSG00000178343 7060 1.596 0.862 0.734 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
12. DSP ENSG00000096696 5097 1.582 0.826 0.756 desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
13. GCA ENSG00000115271 1640 1.579 0.805 0.774 grancalcin [Source:HGNC Symbol;Acc:HGNC:15990]
14. POSTN ENSG00000133110 5228 1.569 0.806 0.763 periostin [Source:HGNC Symbol;Acc:HGNC:16953]
15. BNC2 ENSG00000173068 7220 1.562 0.757 0.805 basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]
16. SVEP1 ENSG00000165124 1854 1.545 0.814 0.731 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
17. DSC3 ENSG00000134762 998 1.543 0.817 0.726 desmocollin 3 [Source:HGNC Symbol;Acc:HGNC:3037]
18. SOX6 ENSG00000110693 4046 1.53 0.770 0.760 SRY-box 6 [Source:HGNC Symbol;Acc:HGNC:16421]
19. LAMC1 ENSG00000135862 20353 1.518 0.795 0.723 laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
20. ATP2B4 ENSG00000058668 5432 1.515 0.814 0.701 ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
21. MAP3K1 ENSG00000095015 8341 1.505 0.716 0.789 mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
22. BNC1 ENSG00000169594 1537 1.5 0.764 0.736 basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
23. PRSS35 ENSG00000146250 558 1.499 0.734 0.765 serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
24. KIAA1551 ENSG00000174718 2689 1.487 0.715 0.772 KIAA1551 [Source:HGNC Symbol;Acc:HGNC:25559]
25. C3orf58 ENSG00000181744 3754 1.485 0.719 0.766 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
26. GUCY1B3 1302 1.447 0.729 0.718 guanylate cyclase 1, soluble, beta 3, transcript variant X5
27. DCN ENSG00000011465 12980 0.95 0.950 - decorin [Source:HGNC Symbol;Acc:HGNC:2705]
28. SPARC ENSG00000113140 39707 0.943 0.943 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
29. COL1A2 ENSG00000164692 43340 0.939 0.939 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
30. GPC3 ENSG00000147257 34465 0.927 0.927 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
31. TRANK1 ENSG00000168016 5941 0.919 0.919 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
32. NRK ENSG00000123572 4309 0.91 0.910 - Nik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]
33. COL1A1 ENSG00000108821 71290 0.909 0.909 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
34. MATN2 ENSG00000132561 968 0.908 0.908 - matrilin 2 [Source:HGNC Symbol;Acc:HGNC:6908]
35. MYRF ENSG00000124920 5866 0.904 0.904 - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
36. SERINC5 ENSG00000164300 3838 0.901 0.901 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
37. GATA6-AS1 ENSG00000266010 839 0.901 0.901 - GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]
38. GATA5 ENSG00000130700 1069 0.896 0.896 - GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
39. RBPMS ENSG00000157110 10094 0.891 0.891 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
40. COL6A2 ENSG00000142173 2550 0.89 0.890 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
41. PEG3 ENSG00000198300 11207 0.884 0.884 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
42. HAND2 ENSG00000164107 5416 0.882 0.882 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
43. PCDH7 ENSG00000169851 5460 0.88 - 0.880 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
44. PDE3A ENSG00000172572 3123 0.875 0.875 - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
45. GNG12 ENSG00000172380 3600 0.875 0.875 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
46. KRT8 ENSG00000170421 12050 0.874 0.874 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
47. APOBEC3C ENSG00000244509 3066 0.872 0.872 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
48. AHNAK ENSG00000124942 11800 0.867 0.867 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
49. WT1 ENSG00000184937 5369 0.854 0.854 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
50. KRT19 ENSG00000171345 1700 0.854 0.854 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
51. KCTD12 ENSG00000178695 23035 0.853 0.853 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
52. SEMA6D ENSG00000137872 5938 0.847 - 0.847 semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
53. GDF6 ENSG00000156466 1122 0.844 - 0.844 growth differentiation factor 6 [Source:HGNC Symbol;Acc:HGNC:4221]
54. CCDC3 ENSG00000151468 3108 0.842 0.842 - coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
55. COL6A1 ENSG00000142156 20649 0.842 0.842 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
56. BST2 ENSG00000130303 1588 0.841 0.841 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
57. B2M ENSG00000166710, ENSG00000273686 5789 0.841 - 0.841 beta-2-microglobulin [Source:HGNC Symbol;Acc:HGNC:914]
58. CARNS1 ENSG00000172508 249 0.841 0.841 - carnosine synthase 1 [Source:HGNC Symbol;Acc:HGNC:29268]
59. IGFBP3 ENSG00000146674 2312 0.84 0.840 - insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]
60. ETV1 ENSG00000006468 3169 0.838 - 0.838 ETS variant 1 [Source:HGNC Symbol;Acc:HGNC:3490]
61. PODXL ENSG00000128567 4375 0.837 0.837 - podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]
62. MYL9 ENSG00000101335 4604 0.834 0.834 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
63. SYTL5 ENSG00000147041 256 0.834 0.834 - synaptotagmin like 5 [Source:HGNC Symbol;Acc:HGNC:15589]
64. S100A10 ENSG00000197747 2505 0.832 0.832 - S100 calcium binding protein A10 [Source:HGNC Symbol;Acc:HGNC:10487]
65. PHACTR2 ENSG00000112419 13720 0.831 0.831 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
66. PDGFRA ENSG00000134853 7332 0.826 - 0.826 platelet derived growth factor receptor alpha [Source:HGNC Symbol;Acc:HGNC:8803]
67. ID2 ENSG00000115738 48412 0.826 - 0.826 inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]
68. SLC9A3R1 ENSG00000109062 4036 0.824 0.824 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
69. FN1 ENSG00000115414 18367 0.823 - 0.823 fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]
70. GUCY1A3 1501 0.823 0.823 - guanylate cyclase 1, soluble, alpha 3, transcript variant X7
71. FLRT3 ENSG00000125848 10097 0.82 - 0.820 fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
72. MPPED2 ENSG00000066382 3879 0.819 0.819 - metallophosphoesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1180]
73. CKAP4 ENSG00000136026 9372 0.816 0.816 - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
74. PLAGL1 ENSG00000118495 6344 0.816 0.816 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
75. CSRP1 ENSG00000159176 5731 0.813 0.813 - cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
76. SLC38A2 ENSG00000134294 18805 0.81 - 0.810 solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]
77. TWIST2 ENSG00000233608 3167 0.809 0.809 - twist family bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:20670]
78. DSC2 ENSG00000134755 3713 0.809 - 0.809 desmocollin 2 [Source:HGNC Symbol;Acc:HGNC:3036]
79. LRRN3 ENSG00000173114 3693 0.806 - 0.806 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
80. CREB3L1 ENSG00000157613 755 0.805 0.805 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
81. TIMP1 ENSG00000102265 19585 0.804 0.804 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
82. SERPINB9 ENSG00000170542 4214 0.804 0.804 - serpin family B member 9 [Source:HGNC Symbol;Acc:HGNC:8955]
83. ARHGAP28 ENSG00000088756 4386 0.804 - 0.804 Rho GTPase activating protein 28 [Source:HGNC Symbol;Acc:HGNC:25509]
84. SP3 ENSG00000172845 6798 0.803 - 0.803 Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]
85. SMAD6 ENSG00000137834 805 0.802 0.802 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
86. AMHR2 ENSG00000135409 747 0.801 0.801 - anti-Mullerian hormone receptor type 2 [Source:HGNC Symbol;Acc:HGNC:465]
87. TRABD2B ENSG00000269113 1426 0.801 0.801 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
88. TSHZ3 ENSG00000121297 5861 0.801 - 0.801 teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:30700]
89. ITGA3 ENSG00000005884 402 0.801 0.801 - integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]
90. PDE11A ENSG00000128655, ENSG00000284741 1225 0.8 0.800 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
91. EIF4A2 ENSG00000156976 16625 0.8 - 0.800 eukaryotic translation initiation factor 4A2 [Source:HGNC Symbol;Acc:HGNC:3284]
92. IFITM3 ENSG00000142089 57239 0.799 0.799 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
93. Sep-07 Sep-07 16686 0.799 - 0.799
94. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.797 0.797 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
95. TNNI1 ENSG00000159173 9853 0.797 0.797 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
96. ORAI3 ENSG00000175938 736 0.796 0.796 - ORAI calcium release-activated calcium modulator 3 [Source:HGNC Symbol;Acc:HGNC:28185]
97. PNKD ENSG00000127838 3640 0.796 0.796 - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
98. PVRL2 PVRL2 2781 0.795 0.795 -
99. ATP2B1 ENSG00000070961 8805 0.794 - 0.794 ATPase plasma membrane Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:814]
100. ALDH1A2 ENSG00000128918 11780 0.794 0.794 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]

There are 203 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA