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Experiment Zebrafish_40hpf_whole_embryo1, section s75.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 16874.83 126495.29 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 6841.15 51281.90
3. col1a1a ENSDARG00000012405, ENSDARG00000116113 4788.80 35897.29 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
4. and1 ENSDARG00000088514 2508.42 18803.35 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
5. CABZ01074130.1 ENSDARG00000105274 1824.31 13675.20
6. actb1 ENSDARG00000037746, ENSDARG00000113649 1596.27 11965.79 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
7. and2 ENSDARG00000079302 1596.27 11965.79 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
8. cfl1l ENSDARG00000012972 1596.27 11965.79 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
9. mt-co2 ENSDARG00000063908 1596.27 11965.79 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
10. actb2 ENSDARG00000037870 1368.23 10256.38 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. eef1a1l1 ENSDARG00000020850 1140.19 8546.97 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
12. im:7150988 ENSDARG00000109310 912.15 6837.56 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
13. rab2a ENSDARG00000020261 912.15 6837.56 RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
14. sparc ENSDARG00000019353 912.15 6837.56 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
15. tmsb4x ENSDARG00000077777 912.15 6837.56 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
16. wu:fb17f05 wu:fb17f05 912.15 6837.56
17. zgc:92061 zgc:92061 912.15 6837.56
18. zgc:92533 zgc:92533 912.15 6837.56
19. apoc1l apoc1l 684.11 5128.15
20. apoeb ENSDARG00000040295 684.11 5128.15 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
21. arhgdig ENSDARG00000004034 684.11 5128.15 Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
22. atp5h 684.11 5128.15 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
23. bambib ENSDARG00000099677 684.11 5128.15 BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
24. cbx5 ENSDARG00000061187 684.11 5128.15 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
25. copb2 ENSDARG00000038743, ENSDARG00000114286 684.11 5128.15 coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
26. hmgn2 ENSDARG00000099572 684.11 5128.15 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
27. mcts1 ENSDARG00000025972 684.11 5128.15 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
28. mt-co3 ENSDARG00000063912 684.11 5128.15 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
29. mt-cyb ENSDARG00000063924 684.11 5128.15 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
30. mt-nd2 ENSDARG00000063899 684.11 5128.15 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
31. ogn 684.11 5128.15 osteoglycin
32. pfn1 ENSDARG00000088091 684.11 5128.15 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
33. rpl18a ENSDARG00000025073 684.11 5128.15 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
34. rpl21 ENSDARG00000010516, ENSDARG00000110263 684.11 5128.15 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
35. rps15a ENSDARG00000010160 684.11 5128.15 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
36. rps4x ENSDARG00000014690 684.11 5128.15 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
37. tpma ENSDARG00000033683 684.11 5128.15 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
38. ARF5 ENSDARG00000070472, ENSDARG00000115687 456.08 3418.82 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
39. MRPS12_1 MRPS12_1 456.08 3418.82
40. RPRD1A ENSDARG00000104861 456.08 3418.82 regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
41. SNRPG ENSDARG00000099667 456.08 3418.82 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
42. TMEM254 ENSDARG00000109902 456.08 3418.82 transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
43. and3 ENSDARG00000056873 456.08 3418.82 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
44. bcam ENSDARG00000090190 456.08 3418.82 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
45. capns1a ENSDARG00000035329 456.08 3418.82 calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
46. capza1a ENSDARG00000034240 456.08 3418.82 capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]
47. cast ENSDARG00000058693 456.08 3418.82 calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
48. cav1 ENSDARG00000103747 456.08 3418.82 caveolin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2415]
49. ccdc126 ENSDARG00000062695 456.08 3418.82 coiled-coil domain containing 126 [Source:ZFIN;Acc:ZDB-GENE-060503-11]
50. ccnd1 ENSDARG00000101637 456.08 3418.82 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
51. cnot3a ENSDARG00000007135 456.08 3418.82 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
52. col1a2 ENSDARG00000020007 456.08 3418.82 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
53. ddr2l ENSDARG00000103830 456.08 3418.82 discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
54. eef2b ENSDARG00000100371, ENSDARG00000109247 456.08 3418.82 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
55. eif3f ENSDARG00000077533 456.08 3418.82 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
56. faua ENSDARG00000099022 456.08 3418.82 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
57. frem2a ENSDARG00000076856 456.08 3418.82 Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
58. frmd6 ENSDARG00000002332 456.08 3418.82 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
59. hdlbp hdlbp 456.08 3418.82
60. hint1 ENSDARG00000103824, ENSDARG00000110789 456.08 3418.82 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
61. hm13 ENSDARG00000037846 456.08 3418.82 histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
62. hmga2 ENSDARG00000069912 456.08 3418.82 high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
63. icn ENSDARG00000009978 456.08 3418.82 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
64. limch1a ENSDARG00000074275 456.08 3418.82 LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
65. mt-nd4 ENSDARG00000063917 456.08 3418.82 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
66. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 456.08 3418.82 prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
67. pgd ENSDARG00000015343, ENSDARG00000117150 456.08 3418.82 phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
68. porcnl_1 ENSDARG00000052455 456.08 3418.82 porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
69. ppp2r1b ppp2r1b 456.08 3418.82
70. psmb1 ENSDARG00000009640 456.08 3418.82 proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
71. rad51ap1 ENSDARG00000045853 456.08 3418.82 RAD51 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-050419-96]
72. rpl10a ENSDARG00000042905, ENSDARG00000115649 456.08 3418.82 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
73. rpl23 ENSDARG00000053457 456.08 3418.82 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
74. rpl8 ENSDARG00000014867 456.08 3418.82 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
75. rpl9 ENSDARG00000037350, ENSDARG00000112384 456.08 3418.82 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
76. rplp1 ENSDARG00000021864 456.08 3418.82 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
77. rps10 ENSDARG00000034897 456.08 3418.82 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
78. rpsa ENSDARG00000019181 456.08 3418.82 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
79. si:ch211-105c13.3 ENSDARG00000089441 456.08 3418.82 si:ch211-105c13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4483]
80. slc25a42 ENSDARG00000099368 456.08 3418.82 solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
81. snd1 ENSDARG00000006766 456.08 3418.82 staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
82. stx4 ENSDARG00000052518 456.08 3418.82 syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
83. tnc ENSDARG00000021948, ENSDARG00000113518 456.08 3418.82 tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
84. tpm4a ENSDARG00000023963 456.08 3418.82 tropomyosin 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2185]
85. ubl3a ENSDARG00000099532, ENSDARG00000113955 456.08 3418.82 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
86. yap1 ENSDARG00000068401, ENSDARG00000112952 456.08 3418.82 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
87. ywhaba ENSDARG00000013078 456.08 3418.82 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
88. zgc:153129 zgc:153129 456.08 3418.82
89. AC024175.17 AC024175.17 228.04 1709.41
90. ACTR3 ENSDARG00000091138 228.04 1709.41 ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
91. AKAP2 AKAP2 228.04 1709.41
92. ARID3C ENSDARG00000067729, ENSDARG00000114447 228.04 1709.41 AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
93. ARSB ENSDARG00000108788 228.04 1709.41 arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
94. C11H6orf120 C11H6orf120 228.04 1709.41
95. C19H1orf85 C19H1orf85 228.04 1709.41
96. CABZ01092303.1 CABZ01092303.1 228.04 1709.41
97. CEP350 ENSDARG00000058000 228.04 1709.41 centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
98. COL2A1 COL2A1 228.04 1709.41
99. CU694256.1 ENSDARG00000097007 228.04 1709.41
100. EML4_1 EML4_1 228.04 1709.41
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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