Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cnot3a

Gene Name Gene ID Reads Annotation
cnot3a ENSDARG00000007135 3084 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]










Genes with expression patterns similar to cnot3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cnot3a ENSDARG00000007135 3084 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
2. stx4 ENSDARG00000052518 1848 2.749 - 0.759 - - - - 0.994 0.996 - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
3. mcts1 ENSDARG00000025972 4662 2.582 - - 0.826 - - - - 0.977 0.779 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
4. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.562 - - 0.891 - - - - 0.948 0.723 sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
5. tmem33 ENSDARG00000041332 2883 2.468 0.818 - 0.852 - - 0.798 - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
6. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 2.435 - - 0.887 - - 0.704 - - 0.844 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
7. eif4e3 ENSDARG00000005078 1624 2.406 - - 0.892 - - 0.704 - - 0.810 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
8. eif3s10 ENSDARG00000076815 10822 2.382 - - - - - 0.702 0.978 - 0.702 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
9. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 2.382 - - 0.858 - - - - 0.784 0.740 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
10. polr2k ENSDARG00000075616 2047 2.348 0.742 0.737 - - - - - - 0.869 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
11. cbx3a ENSDARG00000003860 4922 2.188 - 0.716 0.747 - - - - - 0.725 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
12. ARSB ENSDARG00000108788 774 1.982 - - - - - - 0.990 0.992 - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
13. IGSF8 ENSDARG00000038467 2102 1.935 - - 0.941 - - - 0.994 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
14. setbp1 ENSDARG00000093799 4499 1.897 - - 0.918 - - - 0.979 - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
15. prickle1b ENSDARG00000045694 7536 1.895 - - - - - - 0.919 0.976 - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
16. fkbp8 ENSDARG00000001734 1709 1.878 - - 0.893 - - - 0.985 - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
17. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.876 - - 0.893 - - - - 0.983 - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
18. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.855 - - - - - - 0.985 - 0.870 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
19. pex19 ENSDARG00000004891 2317 1.854 - 0.861 - - - - - 0.993 - peroxisomal biogenesis factor 19 [Source:ZFIN;Acc:ZDB-GENE-050417-424]
20. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 1.832 - - - - - - 0.992 - 0.840 microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
21. tmem59l ENSDARG00000003655 1536 1.826 - - - - - - - 0.976 0.850 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
22. pknox1.1 ENSDARG00000018765 2149 1.813 - - - - - - - 0.988 0.825 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
23. cacna1ba ENSDARG00000021735 870 1.798 - - - - - - 0.990 - 0.808 calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
24. CORO1C CORO1C 5554 1.794 - - 0.808 - - - 0.986 - -
25. zgc:173548 ENSDARG00000070048 558 1.793 - - - - - - - 0.984 0.809 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
26. ncoa6 ENSDARG00000071272 759 1.793 - - - - - - 0.991 - 0.802 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
27. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.784 0.806 - - - - - 0.978 - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
28. fam13a ENSDARG00000075564 1905 1.779 - 0.829 - - - - - 0.950 - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
29. phc2b_1 ENSDARG00000013224 1316 1.777 - - 0.899 - - - - - 0.878 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
30. znf296 ENSDARG00000077897 658 1.772 0.787 - - - - - 0.985 - - zinc finger protein 296 [Source:ZFIN;Acc:ZDB-GENE-050419-201]
31. lman1 ENSDARG00000069980 2550 1.766 0.780 - - - - - - 0.986 - lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]
32. MRPS12_1 MRPS12_1 2714 1.762 0.766 - - - - - - 0.996 -
33. paxip1 ENSDARG00000005606 1417 1.76 - - 0.890 - - - - - 0.870 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
34. gdi1 ENSDARG00000056122 4106 1.759 - - 0.866 - - - - - 0.893 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
35. pvrl1b 1645 1.757 - - - - - - - 0.976 0.781 poliovirus receptor-related 1b
36. arid1b ENSDARG00000092503 1376 1.757 - - 0.890 - - - - - 0.867 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
37. id2a ENSDARG00000055283 7428 1.756 - - 0.773 - - - 0.983 - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
38. sp8a ENSDARG00000011870 1075 1.753 0.767 - - - - - 0.986 - - sp8 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-9849]
39. nploc4 ENSDARG00000100487 1262 1.752 - - 0.886 - - - - - 0.866 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
40. syncripl ENSDARG00000026723 3889 1.747 0.850 - - - - - - - 0.897 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
41. sumo3b ENSDARG00000035993 3414 1.742 0.872 - - - - - - - 0.870 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
42. ankhd1 ENSDARG00000077860 5510 1.741 - - 0.892 - - - - - 0.849 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
43. junbb ENSDARG00000104773 2536 1.74 0.785 - - - - - 0.955 - - JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
44. gadd45gip1 ENSDARG00000039338 1878 1.731 - 0.742 - - - - 0.989 - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
45. hdgfrp2 7462 1.718 - - - - - - 0.992 - 0.726 hepatoma-derived growth factor-related protein 2, transcript variant X1
46. rpz5 ENSDARG00000075718 1703 1.717 - - - - - 0.742 - 0.975 - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
47. fam89a ENSDARG00000079979 4375 1.715 0.778 - - - - - - 0.937 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
48. fbxo28 ENSDARG00000027159 9602 1.709 - - 0.776 - - - - 0.933 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
49. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.7 - - 0.783 - - - 0.917 - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
50. KDM6B KDM6B 10265 1.695 - - - - - - - 0.838 0.857
51. ranbp9 ENSDARG00000061048 2687 1.695 - - 0.867 - - - - - 0.828 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
52. LRP10 ENSDARG00000054539 1895 1.689 0.701 - - - - - 0.988 - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
53. yy1a ENSDARG00000042796 4982 1.687 - - 0.846 - - 0.841 - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
54. olig2 ENSDARG00000040946 1405 1.684 - - 0.891 - - - - - 0.793 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
55. pycr1 pycr1 1258 1.682 0.780 - 0.902 - - - - - -
56. pdzrn3b ENSDARG00000073869 1566 1.682 - - 0.894 - - - - - 0.788 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
57. eva1ba ENSDARG00000102701 1480 1.67 0.786 - 0.884 - - - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
58. FP102272.1 FP102272.1 9473 1.665 0.804 - - - - - - 0.861 -
59. mad2l1 ENSDARG00000004713 3398 1.654 0.837 - 0.817 - - - - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
60. ctnnbip1 ENSDARG00000038954 2519 1.652 - - 0.882 - - - - - 0.770 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
61. ZBTB16 ZBTB16 3385 1.648 0.797 - 0.851 - - - - - -
62. pabpn1 ENSDARG00000045373 4876 1.648 - - 0.762 - - - - - 0.886 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
63. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.642 0.743 - 0.899 - - - - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
64. usp49 ENSDARG00000000229 706 1.641 0.789 - - - - - - - 0.852 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
65. hnrpkl ENSDARG00000007034 4660 1.639 0.804 - 0.835 - - - - - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
66. ccne2 ENSDARG00000098529 4695 1.638 0.783 - 0.855 - - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
67. samm50l ENSDARG00000039681 2465 1.637 - - 0.871 - - - - - 0.766 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
68. tmem248 ENSDARG00000018825 1560 1.635 - - 0.895 - - - - - 0.740 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
69. myl9b ENSDARG00000008030 7830 1.633 - - - - - - 0.822 0.811 - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
70. gfer ENSDARG00000070061 1119 1.628 0.800 - 0.828 - - - - - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
71. JHDM1D JHDM1D 2277 1.623 - 0.790 - - - - - - 0.833
72. LPL_1 LPL_1 1150 1.617 - 0.763 - - - - - - 0.854
73. bnip3la ENSDARG00000025468 3097 1.614 - - - - - 0.792 - - 0.822 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
74. snrnp70 ENSDARG00000077126 5921 1.608 0.781 - - - - - - - 0.827 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
75. arid4a ENSDARG00000043873 4176 1.607 - - - - - 0.810 - - 0.797 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
76. rwdd ENSDARG00000068256 964 1.6 0.838 - - - - - - - 0.762 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
77. pcnxl3 pcnxl3 756 1.6 0.780 - - - - - - - 0.820
78. plp1a ENSDARG00000103732 3544 1.6 - - 0.822 - - - - - 0.778 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
79. kifc1 ENSDARG00000001558 6658 1.599 - - 0.745 - - - - - 0.854 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
80. dock7 ENSDARG00000078675 1995 1.598 - - - - - 0.757 - - 0.841 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
81. arid2 ENSDARG00000007413 4413 1.594 - 0.751 0.843 - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
82. brd3a ENSDARG00000006527 1636 1.587 0.811 - - - - - - - 0.776 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
83. otub1b ENSDARG00000011462 4329 1.584 - - - - - 0.745 - - 0.839 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
84. lbr ENSDARG00000014013 4835 1.582 0.774 - 0.808 - - - - - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
85. spryd7a ENSDARG00000052624 1059 1.58 0.772 - - - - - - - 0.808 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
86. gse1 ENSDARG00000062020 2337 1.579 - 0.701 - - - - - - 0.878 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
87. abca1a ENSDARG00000074635 1085 1.578 0.713 - - - - - - - 0.865 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
88. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.577 - - - 0.719 - - - - 0.858 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
89. lpl ENSDARG00000087697 2578 1.573 0.724 - 0.849 - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
90. cd99l2 ENSDARG00000056722 5036 1.569 - - 0.752 - - - - - 0.817 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
91. fam208b ENSDARG00000074168 2244 1.563 0.703 - - - - - - 0.860 - family with sequence similarity 208, member B [Source:ZFIN;Acc:ZDB-GENE-041111-225]
92. u2af2b ENSDARG00000011740 6946 1.563 - - - - - 0.709 - - 0.854 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
93. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.558 - - 0.825 - - 0.733 - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
94. mllt4 mllt4 2939 1.554 0.749 - - - - - - - 0.805
95. psma8 ENSDARG00000010965 8321 1.551 0.753 - - - - - 0.798 - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
96. pacsin3 ENSDARG00000099339 4668 1.55 0.714 - - - - - 0.836 - - protein kinase C and casein kinase substrate in neurons 3 [Source:ZFIN;Acc:ZDB-GENE-040426-984]
97. CABZ01092303.1 CABZ01092303.1 8825 1.549 0.712 - - - - - - 0.837 -
98. paip2b ENSDARG00000008706 4255 1.548 0.768 - - - - 0.780 - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
99. eif3ja ENSDARG00000012603 6324 1.546 0.702 - 0.844 - - - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
100. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.546 - - - - - 0.714 - - 0.832 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]

There are 1611 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA