Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cbx5

Gene Name Gene ID Reads Annotation
cbx5 ENSDARG00000061187 24026 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]










Genes with expression patterns similar to cbx5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cbx5 ENSDARG00000061187 24026 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
2. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 3.205 - - - 0.777 - 0.701 - 0.803 0.924 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
3. vps29 ENSDARG00000069521 5599 3.192 - 0.901 0.740 - 0.819 - 0.732 - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
4. CABZ01092303.1 CABZ01092303.1 8825 3.128 - - - - 0.712 0.866 0.824 0.726 -
5. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 2.61 - 0.934 - - - 0.830 0.846 - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
6. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.562 - - 0.750 - 0.881 - 0.931 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
7. TNRC6A ENSDARG00000079688 14433 2.538 - - - - - 0.852 0.863 - 0.823 trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
8. grb2b ENSDARG00000038059 9050 2.476 - 0.930 - - - 0.817 0.729 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
9. sf3b1 ENSDARG00000056138 5785 2.467 - 0.926 0.770 - - - 0.771 - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
10. CABZ01013938.1 CABZ01013938.1 4497 2.459 - - - - 0.842 0.703 0.914 - -
11. ddr2l ENSDARG00000103830 1921 2.447 - 0.896 - - - - 0.703 0.848 - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
12. KDM6B KDM6B 10265 2.446 - - - 0.753 0.843 - - 0.850 -
13. seta ENSDARG00000031495 39977 2.444 - 0.805 - 0.717 0.922 - - - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
14. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 2.427 - - - 0.712 - 0.887 0.828 - - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
15. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 2.38 - - 0.715 - - - 0.806 0.859 - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
16. pgd ENSDARG00000015343, ENSDARG00000117150 2512 2.379 - - - - - 0.779 0.748 0.852 - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
17. anp32b ENSDARG00000023330 25013 2.373 - - - 0.832 - 0.787 0.754 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
18. ACVR1B ACVR1B 4824 2.322 - - 0.707 - - 0.827 0.788 - -
19. tmpoa ENSDARG00000007315 3638 2.31 - - - - 0.860 0.747 0.703 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
20. arpp19b ENSDARG00000039880 4823 2.274 - - - 0.739 - 0.708 0.827 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
21. uba1 ENSDARG00000037559 11579 2.231 - - - - - 0.704 0.807 0.720 - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
22. mcm4 ENSDARG00000040041 7971 2.182 0.714 - - 0.715 - - 0.753 - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
23. ckap5 ENSDARG00000102674 5068 1.813 - - - - 0.880 - - - 0.933 cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
24. mtmr9 ENSDARG00000015860 1339 1.8 - - - - - - 0.904 - 0.896 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
25. tra2a ENSDARG00000007863 4449 1.778 - 0.911 - - 0.867 - - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
26. snx12 ENSDARG00000019060 9563 1.774 - - - - - - 0.835 - 0.939 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
27. hnrnpk ENSDARG00000018914 8841 1.773 - - - - 0.921 - 0.852 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
28. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 1.762 - 0.875 - - - - - - 0.887 carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
29. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.746 - - - - - - - 0.849 0.897 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
30. AKAP2 AKAP2 4178 1.744 - 0.897 - - - - - 0.847 -
31. ap2b1 ENSDARG00000035152 2912 1.738 - 0.891 - - - - 0.847 - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
32. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.734 - 0.944 - - - - 0.790 - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
33. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 1.731 - 0.913 - - - - 0.818 - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
34. sf1 ENSDARG00000008188 5142 1.728 - - - - 0.882 - 0.846 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
35. rab5aa ENSDARG00000018602 8947 1.727 - 0.925 - - - 0.802 - - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
36. tmed7 ENSDARG00000046022 2435 1.727 - - - - - - 0.831 - 0.896 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
37. s100u ENSDARG00000071014 4754 1.724 - 0.909 - - - - - 0.815 - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
38. top2a ENSDARG00000024488 4273 1.717 - - - - 0.879 0.838 - - - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
39. atl3 ENSDARG00000004270 2806 1.715 - 0.904 - - - - - 0.811 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
40. sema3gb ENSDARG00000013607 1531 1.713 - 0.878 - - - - - 0.835 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
41. gltscr2 gltscr2 5763 1.712 - 0.932 - - - 0.780 - - -
42. elavl1 11672 1.71 - 0.936 - - - 0.774 - - - ELAV like RNA binding protein 1, transcript variant X3
43. prpf39 ENSDARG00000100209 3721 1.71 - - - - - 0.806 - - 0.904 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
44. anp32e ENSDARG00000054804 11017 1.697 - - - - - - 0.797 0.900 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
45. FP085405.1 FP085405.1 5189 1.694 - - - - - - 0.771 0.923 -
46. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.689 - 0.969 - - 0.720 - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
47. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.682 - - - - 0.885 - 0.797 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
48. fbxo28 ENSDARG00000027159 9602 1.678 - - - - - - 0.860 0.818 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
49. ZFHX2 2463 1.675 - - - - - - 0.807 - 0.868 zinc finger homeobox 2, transcript variant X2
50. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.673 - - - - 0.819 - - 0.854 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
51. spcs1 ENSDARG00000059298 5327 1.673 - - - - 0.826 - 0.847 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
52. ctnnb1 ENSDARG00000014571 12004 1.672 - - - - 0.870 0.802 - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
53. vta1 ENSDARG00000013732 6072 1.672 - - - - - - 0.769 - 0.903 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
54. hnrnpul1 ENSDARG00000040564 6550 1.67 - 0.918 - - - - 0.752 - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
55. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.655 - - - - 0.862 - 0.793 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
56. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.653 - - - - - 0.790 - 0.863 - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
57. hm13 ENSDARG00000037846 5019 1.645 - - - - - - 0.797 0.848 - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
58. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.645 - - - - - 0.792 - 0.853 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
59. lmnb2 ENSDARG00000101624 11304 1.638 - 0.857 - - - 0.781 - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
60. wls ENSDARG00000009534 8719 1.638 - - - - - 0.745 0.893 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
61. rer1 ENSDARG00000012747 6939 1.637 - - - - 0.821 - 0.816 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
62. rnf183 ENSDARG00000068851 2427 1.636 - 0.904 - - - - 0.732 - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
63. tmeff1b ENSDARG00000056740 11253 1.636 - - 0.716 - - - - - 0.920 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
64. si:ch211-87l2.1 si:ch211-87l2.1 2403 1.632 - 0.882 - - - - 0.750 - -
65. snrpd1 ENSDARG00000011648 8615 1.63 - - - - - 0.714 - - 0.916 small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
66. snrpe ENSDARG00000033175 7462 1.629 - - - 0.800 - - 0.829 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
67. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.629 - - - - 0.859 - 0.770 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
68. cnn2 ENSDARG00000035858 18201 1.627 - - - - - - 0.770 0.857 - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
69. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.625 - - - - 0.917 - 0.708 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
70. snd1 ENSDARG00000006766 12906 1.621 - - - - - 0.779 - 0.842 - staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
71. cnih4 ENSDARG00000087759 3937 1.621 - - - - - - 0.737 - 0.884 cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
72. MAP4K4 ENSDARG00000098670 4665 1.621 - - - - 0.887 0.734 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
73. ppp2r1b ppp2r1b 3469 1.619 - - - - - 0.776 - 0.843 -
74. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.617 - - - - 0.837 - 0.780 - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
75. nup98 ENSDARG00000074955 3998 1.614 - - - 0.709 - - - - 0.905 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
76. gng5 ENSDARG00000039830 12102 1.613 - - - - - 0.768 0.845 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
77. caprin1b ENSDARG00000054272 7033 1.612 - - - - - 0.897 0.715 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
78. rcor1 ENSDARG00000031434 2733 1.612 - - - - - 0.715 - 0.897 - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
79. ash1l ENSDARG00000070981 2520 1.61 - - - - - - 0.705 - 0.905 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
80. galnt12 ENSDARG00000055490 1653 1.609 - - - - - - 0.764 0.845 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
81. spcs2 ENSDARG00000042823 10032 1.608 - - - - - 0.896 0.712 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
82. tbca ENSDARG00000016754 6427 1.607 - - - - - 0.806 0.801 - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
83. hp1bp3 ENSDARG00000044669 23708 1.607 - - - - 0.836 0.771 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
84. gsnb ENSDARG00000045262 4382 1.606 - 0.881 - - - - 0.725 - - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
85. rbb4 rbb4 15541 1.606 - - - 0.892 - - 0.714 - -
86. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.604 - - - - 0.843 - 0.761 - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
87. arcn1b ENSDARG00000031214 4529 1.604 - - - - 0.830 - 0.774 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
88. cnn3b ENSDARG00000029856 4807 1.602 - 0.882 - - - 0.720 - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
89. tspan7 ENSDARG00000015759 13891 1.602 - 0.899 - 0.703 - - - - - tetraspanin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5435]
90. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.595 - - 0.866 - - - 0.729 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
91. HNRNPA2B1 HNRNPA2B1 14997 1.594 - - 0.823 - - - 0.771 - -
92. syap1 ENSDARG00000012946 3560 1.593 - - - - - 0.769 0.824 - - synapse associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-917]
93. golga7 ENSDARG00000057676 4691 1.591 - - - - - 0.705 0.886 - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
94. prkcea ENSDARG00000003008 1118 1.588 - 0.882 - - - 0.706 - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
95. bsg ENSDARG00000019881 11894 1.588 - - - - - 0.789 0.799 - - basigin [Source:ZFIN;Acc:ZDB-GENE-030131-9638]
96. ttc13 ENSDARG00000063242 1360 1.587 - - - - 0.811 - 0.776 - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
97. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.587 - - - - - 0.750 0.837 - - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
98. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.585 - - - - - 0.733 0.852 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
99. prickle1b ENSDARG00000045694 7536 1.584 - - - - - 0.741 - 0.843 - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
100. arf6a ENSDARG00000101626 2959 1.584 - 0.879 - - - 0.705 - - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]

There are 1394 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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