Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s20.

Sample reads: 391,630. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 8865.46 22637.31 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 4229.90 10800.74 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. ACTB ENSG00000075624 4080.82 10420.08 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
4. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 3270.86 8351.90 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
5. PTMA ENSG00000187514 3075.23 7852.38 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
6. TUBA1B ENSG00000123416 2685.99 6858.48 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
7. ACTG1 ENSG00000184009 2639.22 6739.06 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. GNAS ENSG00000087460 2534.43 6471.48 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
9. RPS27 ENSG00000177954 2526.11 6450.24 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
10. PPIA ENSG00000196262 2473.27 6315.32 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
11. TUBA1A ENSG00000167552 2249.08 5742.86 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
12. RPS12 ENSG00000112306 1855.80 4738.65 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
13. RPL5 ENSG00000122406 1663.09 4246.58 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
14. HSP90AB1 ENSG00000096384 1611.15 4113.95 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
15. TUBB3 ENSG00000258947 1551.11 3960.65 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
16. NNAT ENSG00000053438 1540.76 3934.22 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
17. RPS2 ENSG00000140988 1489.27 3802.74 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
18. RPS6 ENSG00000137154 1471.51 3757.39 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
19. RPL15 ENSG00000174748 1456.21 3718.33 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
20. GAPDH ENSG00000111640 1416.41 3616.70 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
21. HNRNPC ENSG00000092199 1401.12 3577.66 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
22. RPL18A ENSG00000105640 1362.00 3477.77 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
23. HIST1H4C ENSG00000197061 1360.42 3473.73 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
24. RPS20 ENSG00000008988 1339.96 3421.49 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
25. MTRNR2L8 ENSG00000255823 1332.76 3403.11 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
26. RPL10A ENSG00000198755 1321.07 3373.26 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
27. RPL31 ENSG00000071082 1298.36 3315.27 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
28. RPS23 ENSG00000186468 1291.84 3298.62 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
29. RPL7A ENSG00000148303, ENSG00000280858 1254.29 3202.74 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
30. STMN1 ENSG00000117632 1175.14 3000.63 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
31. RPL10 ENSG00000147403 1152.20 2942.06 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
32. RPL13AP20 ENSG00000234498 1137.13 2903.58 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
33. TMSB4X ENSG00000205542 1132.19 2890.97 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
34. STMN2 ENSG00000104435 1036.17 2645.78 stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
35. RPLP0 ENSG00000089157 984.23 2513.16 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
36. RPL11 ENSG00000142676 983.78 2512.01 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
37. RPL13 ENSG00000167526 970.06 2476.98 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
38. PGAM1 ENSG00000171314 968.26 2472.38 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
39. MAP1B ENSG00000131711 950.50 2427.03 microtubule associated protein 1B [Source:HGNC Symbol;Acc:HGNC:6836]
40. RPS11 ENSG00000142534 931.61 2378.80 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
41. UBB ENSG00000170315 913.62 2332.86 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
42. RPS16 ENSG00000105193 912.05 2328.85 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
43. RPS13 ENSG00000110700 911.82 2328.27 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
44. HNRNPD ENSG00000138668 904.85 2310.47 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
45. RPL37 ENSG00000145592 895.86 2287.51 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
46. RPL34 ENSG00000109475 889.33 2270.84 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
47. MDK ENSG00000110492 878.54 2243.29 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
48. MTRNR2L1 ENSG00000256618 827.95 2114.11 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
49. TPT1 ENSG00000133112 827.95 2114.11 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
50. RPL35 ENSG00000136942 820.30 2094.58 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
51. RPS5 ENSG00000083845 817.38 2087.12 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
52. HMGB1 ENSG00000189403 790.17 2017.64 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
53. SRP14 ENSG00000140319 783.65 2000.99 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
54. SST ENSG00000157005 778.48 1987.79 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
55. CKB ENSG00000166165 776.23 1982.05 creatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]
56. RPS15A ENSG00000134419 766.33 1956.77 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
57. EIF4G2 ENSG00000110321 764.54 1952.20 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
58. PFN1 ENSG00000108518 758.69 1937.26 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
59. RPS28 ENSG00000233927 751.04 1917.73 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
60. H2AFZ ENSG00000164032 732.15 1869.49 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
61. CD24 ENSG00000272398 729.01 1861.47 CD24 molecule [Source:HGNC Symbol;Acc:HGNC:1645]
62. RPS27A ENSG00000143947 721.81 1843.09 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
63. MARCKSL1 ENSG00000175130 709.44 1811.50 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
64. VIM ENSG00000026025 695.73 1776.50 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
65. NPM1 ENSG00000181163 695.28 1775.35 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
66. CFL1 ENSG00000172757 694.38 1773.05 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
67. CAPNS1 ENSG00000126247 692.58 1768.45 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
68. COX7A2 ENSG00000112695 680.66 1738.02 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
69. TUBB2B ENSG00000137285 674.59 1722.52 tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829]
70. UBA52 ENSG00000221983 673.69 1720.22 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
71. GAP43 ENSG00000172020 661.77 1689.78 growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]
72. RPS8 ENSG00000142937 656.38 1676.02 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
73. MYL6 ENSG00000092841 646.48 1650.74 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
74. RPL23 ENSG00000125691 646.48 1650.74 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
75. NREP ENSG00000134986 645.13 1647.29 neuronal regeneration related protein [Source:HGNC Symbol;Acc:HGNC:16834]
76. YWHAZ ENSG00000164924 641.76 1638.69 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
77. DPYSL2 ENSG00000092964 629.62 1607.69 dihydropyrimidinase like 2 [Source:HGNC Symbol;Acc:HGNC:3014]
78. SRSF2 ENSG00000161547 623.32 1591.60 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
79. INA ENSG00000148798 622.87 1590.45 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
80. HNRNPA1 ENSG00000135486 619.50 1581.85 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
81. PBX1 ENSG00000185630 614.10 1568.06 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
82. PCBP1 ENSG00000169564 614.10 1568.06 poly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
83. SERF2 ENSG00000140264 614.10 1568.06 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
84. NGFRAP1 NGFRAP1 611.18 1560.60
85. HBE1 ENSG00000213931 595.66 1520.97 hemoglobin subunit epsilon 1 [Source:HGNC Symbol;Acc:HGNC:4830]
86. RPL4 ENSG00000174444 593.86 1516.38 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
87. UCHL1 ENSG00000154277 590.72 1508.36 ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513]
88. PKM ENSG00000067225 584.64 1492.84 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
89. RPL3 ENSG00000100316 582.62 1487.68 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
90. MALAT1 ENSG00000251562 572.28 1461.28 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
91. NEFM ENSG00000104722 572.05 1460.69 neurofilament medium [Source:HGNC Symbol;Acc:HGNC:7734]
92. RPL22 ENSG00000116251 570.93 1457.83 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
93. BEX1 ENSG00000133169 555.86 1419.35 brain expressed X-linked 1 [Source:HGNC Symbol;Acc:HGNC:1036]
94. YBX1 ENSG00000065978 555.86 1419.35 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
95. RPS3A ENSG00000145425 555.41 1418.20 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
96. RPL6 ENSG00000089009 553.16 1412.45 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
97. PDLIM1 ENSG00000107438 545.29 1392.36 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
98. NUCKS1 ENSG00000069275 542.82 1386.05 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
99. FTH1 ENSG00000167996 536.07 1368.82 ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]
100. TOMM6 ENSG00000214736 534.50 1364.81 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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