Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PDLIM1

Gene Name Gene ID Reads Annotation
PDLIM1 ENSG00000107438 11977 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]



Genes with expression patterns similar to PDLIM1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. PDLIM1 ENSG00000107438 11977 2 1.000 1.000 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
2. GAP43 ENSG00000172020 9990 1.93 0.957 0.973 growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]
3. INA ENSG00000148798 12811 1.919 0.970 0.949 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
4. NEFL ENSG00000277586 6204 1.914 0.984 0.930 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
5. NEFM ENSG00000104722 6565 1.91 0.968 0.942 neurofilament medium [Source:HGNC Symbol;Acc:HGNC:7734]
6. RTN1 ENSG00000139970 4545 1.897 0.946 0.951 reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
7. MAPT ENSG00000186868, ENSG00000276155, ENSG00000277956 1829 1.893 0.936 0.957 microtubule associated protein tau [Source:HGNC Symbol;Acc:HGNC:6893]
8. SST ENSG00000157005 12887 1.89 0.941 0.949 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
9. CDK5R1 ENSG00000176749 4151 1.87 0.927 0.943 cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
10. SV2C ENSG00000122012 837 1.87 0.944 0.926 synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
11. L1CAM ENSG00000198910 1652 1.854 0.935 0.919 L1 cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:6470]
12. ARHGAP36 ENSG00000147256 614 1.854 0.937 0.917 Rho GTPase activating protein 36 [Source:HGNC Symbol;Acc:HGNC:26388]
13. STMN2 ENSG00000104435 16286 1.848 0.944 0.904 stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
14. GNAO1 ENSG00000087258 567 1.838 0.909 0.929 G protein subunit alpha o1 [Source:HGNC Symbol;Acc:HGNC:4389]
15. GDAP1L1 ENSG00000124194 1388 1.83 0.930 0.900 ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
16. MLLT11 ENSG00000213190 18099 1.815 0.946 0.869 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
17. OLIG1 ENSG00000184221 511 1.812 0.932 0.880 oligodendrocyte transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16983]
18. ISLR2 ENSG00000167178 161 1.807 0.875 0.932 immunoglobulin superfamily containing leucine rich repeat 2 [Source:HGNC Symbol;Acc:HGNC:29286]
19. OLIG2 ENSG00000205927 533 1.805 0.919 0.886 oligodendrocyte transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:9398]
20. LHX3 ENSG00000107187 507 1.802 0.913 0.889 LIM homeobox 3 [Source:HGNC Symbol;Acc:HGNC:6595]
21. SLC10A4 ENSG00000145248 260 1.798 0.937 0.861 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
22. CAMK2N1 ENSG00000162545 10727 1.791 0.927 0.864 calcium/calmodulin dependent protein kinase II inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:24190]
23. MYT1 ENSG00000196132, ENSG00000276876 1089 1.791 0.925 0.866 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
24. ECEL1 ENSG00000171551 286 1.788 0.857 0.931 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
25. MAPRE2 ENSG00000166974 5413 1.777 0.908 0.869 microtubule associated protein RP/EB family member 2 [Source:HGNC Symbol;Acc:HGNC:6891]
26. TUBB2A ENSG00000137267 4508 1.769 0.868 0.901 tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
27. UBE2QL1 ENSG00000215218 1320 1.766 0.888 0.878 ubiquitin conjugating enzyme E2 Q family like 1 [Source:HGNC Symbol;Acc:HGNC:37269]
28. CRMP1 ENSG00000072832 9692 1.759 0.909 0.850 collapsin response mediator protein 1 [Source:HGNC Symbol;Acc:HGNC:2365]
29. HMP19 643 1.747 0.868 0.879 HMP19 protein
30. ENO2 ENSG00000111674 2931 1.747 0.894 0.853 enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
31. ATP6V1G2 ENSG00000206445, ENSG00000213760, ENSG00000226850, ENSG00000227587, ENSG00000230900, ENSG00000234668, ENSG00000234920 2106 1.746 0.895 0.851 ATPase H+ transporting V1 subunit G2 [Source:HGNC Symbol;Acc:HGNC:862]
32. CCDC184 ENSG00000177875 785 1.745 0.852 0.893 coiled-coil domain containing 184 [Source:HGNC Symbol;Acc:HGNC:33749]
33. SCN3A ENSG00000153253 621 1.745 0.901 0.844 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
34. SYT4 ENSG00000132872 928 1.742 0.880 0.862 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
35. TERF2IP ENSG00000166848 18929 1.734 0.909 0.825 TERF2 interacting protein [Source:HGNC Symbol;Acc:HGNC:19246]
36. KIF1A ENSG00000130294 2920 1.733 0.920 0.813 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
37. DCX ENSG00000077279 9569 1.731 0.968 0.763 doublecortin [Source:HGNC Symbol;Acc:HGNC:2714]
38. RAB6B ENSG00000154917 1104 1.728 0.831 0.897 RAB6B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14902]
39. TUBB3 ENSG00000258947 53998 1.725 0.883 0.842 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
40. VSTM2A ENSG00000170419 227 1.721 0.884 0.837 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
41. ATP1A3 ENSG00000105409 428 1.72 0.854 0.866 ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
42. RET ENSG00000165731 339 1.713 0.812 0.901 ret proto-oncogene [Source:HGNC Symbol;Acc:HGNC:9967]
43. NELL1 ENSG00000165973 2345 1.699 0.944 0.755 neural EGFL like 1 [Source:HGNC Symbol;Acc:HGNC:7750]
44. CHRNA4 ENSG00000101204 750 1.694 0.803 0.891 cholinergic receptor nicotinic alpha 4 subunit [Source:HGNC Symbol;Acc:HGNC:1958]
45. STMN4 ENSG00000015592 748 1.689 0.829 0.860 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
46. ELAVL2 ENSG00000107105 5067 1.685 0.952 0.733 ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
47. SEZ6L2 ENSG00000174938 1533 1.678 0.816 0.862 seizure related 6 homolog like 2 [Source:HGNC Symbol;Acc:HGNC:30844]
48. REEP1 ENSG00000068615 2132 1.677 0.894 0.783 receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
49. KLC1 ENSG00000126214 6387 1.673 0.863 0.810 kinesin light chain 1 [Source:HGNC Symbol;Acc:HGNC:6387]
50. FABP7 ENSG00000164434 1064 1.67 0.847 0.823 fatty acid binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3562]
51. ELAVL3 ENSG00000196361 2164 1.667 0.851 0.816 ELAV like RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3314]
52. SCML4 ENSG00000146285 198 1.661 0.809 0.852 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
53. PGM2L1 ENSG00000165434 4182 1.66 0.851 0.809 phosphoglucomutase 2 like 1 [Source:HGNC Symbol;Acc:HGNC:20898]
54. LOC101929563 1404 1.656 0.929 0.727 uncharacterized LOC101929563
55. AKAP6 ENSG00000151320 580 1.651 0.818 0.833 A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
56. CHODL ENSG00000154645 212 1.65 0.863 0.787 chondrolectin [Source:HGNC Symbol;Acc:HGNC:17807]
57. EPB41L1 ENSG00000088367 2310 1.639 0.794 0.845 erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
58. TRIM36 ENSG00000152503 452 1.63 0.838 0.792 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
59. KIF5C ENSG00000168280, ENSG00000276734 1294 1.63 0.798 0.832 kinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]
60. ELAVL4 ENSG00000162374 5082 1.627 0.834 0.793 ELAV like RNA binding protein 4 [Source:HGNC Symbol;Acc:HGNC:3315]
61. BASP1 ENSG00000176788 18176 1.62 0.862 0.758 brain abundant membrane attached signal protein 1 [Source:HGNC Symbol;Acc:HGNC:957]
62. DNER ENSG00000187957 2971 1.619 0.807 0.812 delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
63. SRRM4 ENSG00000139767 1060 1.617 0.850 0.767 serine/arginine repetitive matrix 4 [Source:HGNC Symbol;Acc:HGNC:29389]
64. NSG1 ENSG00000168824 2797 1.616 0.894 0.722 neuronal vesicle trafficking associated 1 [Source:HGNC Symbol;Acc:HGNC:18790]
65. ACTL6B ENSG00000077080 270 1.616 0.832 0.784 actin like 6B [Source:HGNC Symbol;Acc:HGNC:160]
66. DBNDD1 ENSG00000003249 1043 1.614 0.828 0.786 dysbindin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28455]
67. RBFOX3 ENSG00000167281 329 1.613 0.798 0.815 RNA binding fox-1 homolog 3 [Source:HGNC Symbol;Acc:HGNC:27097]
68. DUSP4 ENSG00000120875 4982 1.609 0.814 0.795 dual specificity phosphatase 4 [Source:HGNC Symbol;Acc:HGNC:3070]
69. FXYD7 ENSG00000221946 253 1.609 0.798 0.811 FXYD domain containing ion transport regulator 7 [Source:HGNC Symbol;Acc:HGNC:4034]
70. TUBA1A ENSG00000167552 83799 1.609 0.858 0.751 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
71. RUNDC3B ENSG00000105784 261 1.605 0.753 0.852 RUN domain containing 3B [Source:HGNC Symbol;Acc:HGNC:30286]
72. RUFY3 ENSG00000018189 4536 1.604 0.760 0.844 RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
73. GAB2 ENSG00000033327 1360 1.597 0.842 0.755 GRB2 associated binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14458]
74. SYT1 ENSG00000067715 4379 1.594 0.859 0.735 synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]
75. SNCG ENSG00000173267 1866 1.593 0.822 0.771 synuclein gamma [Source:HGNC Symbol;Acc:HGNC:11141]
76. SCN3B ENSG00000166257 491 1.592 0.759 0.833 sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
77. RBP1 ENSG00000114115 35038 1.586 0.795 0.791 retinol binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9919]
78. HSPA12A ENSG00000165868 1357 1.579 0.827 0.752 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
79. CEND1 ENSG00000184524 300 1.573 0.759 0.814 cell cycle exit and neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:24153]
80. DPYSL3 ENSG00000113657 7319 1.573 0.869 0.704 dihydropyrimidinase like 3 [Source:HGNC Symbol;Acc:HGNC:3015]
81. NGFR ENSG00000064300 5047 1.57 0.829 0.741 nerve growth factor receptor [Source:HGNC Symbol;Acc:HGNC:7809]
82. SMPD3 ENSG00000103056 241 1.561 0.789 0.772 sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
83. MAP2 ENSG00000078018 3573 1.56 0.820 0.740 microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
84. Sep-03 Sep-03 2608 1.559 0.767 0.792
85. RUNDC3A ENSG00000108309 522 1.543 0.741 0.802 RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
86. RBFOX1 ENSG00000078328 852 1.533 0.794 0.739 RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
87. NCAN ENSG00000130287 1136 1.531 0.813 0.718 neurocan [Source:HGNC Symbol;Acc:HGNC:2465]
88. PHF21B ENSG00000056487 2704 1.529 0.777 0.752 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
89. FAM19A5 ENSG00000219438 1353 1.528 0.773 0.755 family with sequence similarity 19 member A5, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21592]
90. AMER2 ENSG00000165566 317 1.528 0.740 0.788 APC membrane recruitment protein 2 [Source:HGNC Symbol;Acc:HGNC:26360]
91. UCHL1 ENSG00000154277 28345 1.526 0.790 0.736 ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513]
92. AKR1C2 ENSG00000151632 457 1.526 0.769 0.757 aldo-keto reductase family 1 member C2 [Source:HGNC Symbol;Acc:HGNC:385]
93. EEF1A2 ENSG00000101210 207 1.518 0.802 0.716 eukaryotic translation elongation factor 1 alpha 2 [Source:HGNC Symbol;Acc:HGNC:3192]
94. CDKN2D ENSG00000129355 839 1.513 0.748 0.765 cyclin dependent kinase inhibitor 2D [Source:HGNC Symbol;Acc:HGNC:1790]
95. APLP1 ENSG00000105290 11270 1.507 0.742 0.765 amyloid beta precursor like protein 1 [Source:HGNC Symbol;Acc:HGNC:597]
96. SCG3 ENSG00000104112 681 1.505 0.769 0.736 secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]
97. FAIM2 ENSG00000135472 687 1.476 0.713 0.763 Fas apoptotic inhibitory molecule 2 [Source:HGNC Symbol;Acc:HGNC:17067]
98. STMN3 ENSG00000197457 2808 1.473 0.746 0.727 stathmin 3 [Source:HGNC Symbol;Acc:HGNC:15926]
99. XPR1 ENSG00000143324 6242 1.471 0.745 0.726 xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
100. CALCB ENSG00000175868 1967 1.471 0.715 0.756 calcitonin related polypeptide beta [Source:HGNC Symbol;Acc:HGNC:1438]

There are 159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA