Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s56.

Sample reads: 124,242. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 4579.12 36856.40
2. MT-CO3 MT-CO3 3369.54 27120.74
3. MT-CO1 MT-CO1 2419.16 19471.33
4. MT-ND4 MT-ND4 2419.16 19471.33
5. gga-mir-3527 gga-mir-3527 2419.16 19471.33
6. MT-ND5 MT-ND5 2332.76 18775.91
7. MT-ND3 MT-ND3 2246.36 18080.49
8. MT-CYB MT-CYB 2159.96 17385.08
9. EEF1A EEF1A 1987.16 15994.25
10. MT-ND1 MT-ND1 1727.97 13908.08
11. gga-mir-3533 ENSGALG00000027736 1382.37 11126.41 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. RPL5 ENSGALG00000005922 1209.58 9735.66 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
13. BTF3L4 ENSGALG00000010570 777.59 6258.66 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
14. RPS4 RPS4 777.59 6258.66
15. GAPDH ENSGALG00000014442 691.19 5563.25 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
16. HMGN5 ENSGALG00000007131 691.19 5563.25 high mobility group nucleosome binding domain 5, transcript variant X1
17. NME2 ENSGALG00000002932 691.19 5563.25 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
18. RPL8 ENSGALG00000016232 691.19 5563.25 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
19. IGF2BP3 ENSGALG00000010961 604.79 4867.83 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
20. RAN ENSGALG00000002569 604.79 4867.83 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
21. RPL26 RPL26 604.79 4867.83
22. RPS7 ENSGALG00000016392 604.79 4867.83 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
23. EIF4G2 ENSGALG00000005587 518.39 4172.42 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
24. ENSGALG00000002696 ENSGALG00000002696 518.39 4172.42
25. HMGB2 ENSGALG00000010745 518.39 4172.42 high mobility group box 2 [Source:NCBI gene;Acc:396482]
26. MDK ENSGALG00000008367 518.39 4172.42 midkine [Source:NCBI gene;Acc:423196]
27. PPIA ENSGALG00000028600 518.39 4172.42 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
28. RPL15 ENSGALG00000011290 518.39 4172.42 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
29. RPL27A ENSGALG00000005948 518.39 4172.42 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
30. RPL7 ENSGALG00000035252 518.39 4172.42 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
31. STMN1 ENSGALG00000001475 518.39 4172.42 stathmin 1 [Source:NCBI gene;Acc:396057]
32. TMSB4X ENSGALG00000026383 518.39 4172.42 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
33. YWHAZ ENSGALG00000031387 518.39 4172.42 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
34. CIRBP ENSGALG00000030918 431.99 3477.00 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
35. EIF1 ENSGALG00000028517 431.99 3477.00 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
36. ENO1 ENSGALG00000002377 431.99 3477.00 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
37. ENSGALG00000028992 ENSGALG00000028992 431.99 3477.00
38. MIF ENSGALG00000006326 431.99 3477.00 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
39. MT-ND2 MT-ND2 431.99 3477.00
40. PGK1 ENSGALG00000007936 431.99 3477.00 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
41. PRDX1 ENSGALG00000010243 431.99 3477.00 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
42. RPL18A 431.99 3477.00 ribosomal protein L18a
43. RPL4 ENSGALG00000007711 431.99 3477.00 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
44. RPL6 ENSGALG00000004818 431.99 3477.00 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
45. RPL7A ENSGALG00000003197 431.99 3477.00 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
46. RPS15 ENSGALG00000015195 431.99 3477.00 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
47. RPS16 ENSGALG00000026490 431.99 3477.00 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
48. RPS21 ENSGALG00000005338 431.99 3477.00 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
49. RPS29 ENSGALG00000012229 431.99 3477.00 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
50. RPSA 431.99 3477.00 ribosomal protein SA
51. SNRPG ENSGALG00000028409 431.99 3477.00 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
52. ANP32B ENSGALG00000037483 345.59 2781.58 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
53. H2AFZ ENSGALG00000014023 345.59 2781.58 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
54. KPNA2 ENSGALG00000003584 345.59 2781.58 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
55. LDHB ENSGALG00000035836 345.59 2781.58 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
56. RPL13 ENSGALG00000006179 345.59 2781.58 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
57. RPL23 ENSGALG00000001634 345.59 2781.58 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
58. RPL35 ENSGALG00000035677 345.59 2781.58 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
59. RPL36AL ENSGALG00000004952 345.59 2781.58 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
60. RPL38 ENSGALG00000001465 345.59 2781.58 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
61. RPLP1 ENSGALG00000030878 345.59 2781.58 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
62. RPS11 ENSGALG00000017299 345.59 2781.58 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
63. RPS23 ENSGALG00000015617 345.59 2781.58 ribosomal protein S23
64. TBL1XR1 ENSGALG00000039182 345.59 2781.58 transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
65. ADM ENSGALG00000046593 259.20 2086.25 adrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]
66. ATP6V1G1 ENSGALG00000007190 259.20 2086.25 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
67. CBX3 ENSGALG00000011038 259.20 2086.25 chromobox 3 [Source:NCBI gene;Acc:395355]
68. CHMP6 ENSGALG00000026428 259.20 2086.25 charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
69. COLEC10 ENSGALG00000033144 259.20 2086.25 collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
70. COX5A ENSGALG00000014121 259.20 2086.25 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
71. EEF1B2 ENSGALG00000008590 259.20 2086.25 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
72. EIF5A2 ENSGALG00000009309 259.20 2086.25 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
73. ENSGALG00000018386 ENSGALG00000018386 259.20 2086.25
74. HMGB1 ENSGALG00000042875 259.20 2086.25 high mobility group box 1 [Source:NCBI gene;Acc:395724]
75. HSPA9 ENSGALG00000002363 259.20 2086.25 heat shock protein family A (Hsp70) member 9 [Source:NCBI gene;Acc:416183]
76. KDM5B ENSGALG00000038948 259.20 2086.25 lysine demethylase 5B [Source:NCBI gene;Acc:421168]
77. MEIS2 ENSGALG00000039118 259.20 2086.25 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
78. MT-ATP8 MT-ATP8 259.20 2086.25
79. NDUFA11 ENSGALG00000021692 259.20 2086.25 NADH:ubiquinone oxidoreductase subunit A11
80. NDUFAB1 ENSGALG00000006073 259.20 2086.25 NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
81. NDUFS6 ENSGALG00000013191 259.20 2086.25 NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
82. NONO ENSGALG00000005507 259.20 2086.25 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
83. NRDE2 ENSGALG00000010677 259.20 2086.25 NRDE-2, necessary for RNA interference, domain containing [Source:HGNC Symbol;Acc:HGNC:20186]
84. NXN 259.20 2086.25 nucleoredoxin, transcript variant X1
85. PSMA7 ENSGALG00000030411 259.20 2086.25 proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
86. RPL12 ENSGALG00000008806 259.20 2086.25 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
87. RPL14 ENSGALG00000043379 259.20 2086.25 ribosomal protein L14
88. RPL21 ENSGALG00000027035 259.20 2086.25 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
89. RPL24 ENSGALG00000015339 259.20 2086.25 ribosomal protein L24 [Source:NCBI gene;Acc:418401]
90. RPL27 ENSGALG00000002837 259.20 2086.25 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
91. RPL3 ENSGALG00000012172 259.20 2086.25 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
92. RPL31 ENSGALG00000016775 259.20 2086.25 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
93. RPL36 ENSGALG00000000474 259.20 2086.25 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
94. RPL9 ENSGALG00000000150 259.20 2086.25 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
95. RPLP2 ENSGALG00000034811 259.20 2086.25 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
96. RPS13 ENSGALG00000006096 259.20 2086.25 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
97. RPS15A ENSGALG00000006771 259.20 2086.25 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
98. RPS3A ENSGALG00000010077 259.20 2086.25 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
99. RPS8 ENSGALG00000010124 259.20 2086.25 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
100. RUVBL1 ENSGALG00000005931 259.20 2086.25 RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA