Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s54.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 4758.16 38298.06
2. MT-CO3 MT-CO3 4758.16 38298.06
3. gga-mir-3527 gga-mir-3527 3436.45 27659.72
4. MT-ND1 MT-ND1 2643.42 21276.68
5. MT-ND5 MT-ND5 2379.08 19149.03
6. PPIA ENSGALG00000028600 2379.08 19149.03 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
7. RPL15 ENSGALG00000011290 1850.40 14893.72 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
8. gga-mir-3533 ENSGALG00000027736 1850.40 14893.72 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
9. EEF1A EEF1A 1321.71 10638.34
10. EXOSC3 ENSGALG00000002426 1321.71 10638.34 exosome component 3 [Source:NCBI gene;Acc:423626]
11. GAPDH ENSGALG00000014442 1321.71 10638.34 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. EIF4G2 ENSGALG00000005587 1057.37 8510.69 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
13. GPI ENSGALG00000004956 1057.37 8510.69 glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
14. MT-ND3 MT-ND3 1057.37 8510.69
15. PPP2CA ENSGALG00000006462 1057.37 8510.69 protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
16. RPL18A 1057.37 8510.69 ribosomal protein L18a
17. RPL35A ENSGALG00000007611, ENSGALG00000041230 1057.37 8510.69 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
18. RPL7A ENSGALG00000003197 1057.37 8510.69 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
19. RPS23 ENSGALG00000015617 1057.37 8510.69 ribosomal protein S23
20. EEF1B2 ENSGALG00000008590 793.03 6383.04 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
21. ENSGALG00000002696 ENSGALG00000002696 793.03 6383.04
22. ENSGALG00000018384 ENSGALG00000018384 793.03 6383.04
23. MT-CO1 MT-CO1 793.03 6383.04
24. MT-CYB MT-CYB 793.03 6383.04
25. MT-ND4 MT-ND4 793.03 6383.04
26. NME2 ENSGALG00000002932 793.03 6383.04 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
27. PSPC1 ENSGALG00000017142 793.03 6383.04 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
28. RPL27 ENSGALG00000002837 793.03 6383.04 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
29. RPL29 ENSGALG00000026978 793.03 6383.04 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
30. RPS15A ENSGALG00000006771 793.03 6383.04 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
31. RPS7 ENSGALG00000016392 793.03 6383.04 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
32. SNRPE ENSGALG00000000137 793.03 6383.04 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
33. ABCF2 ENSGALG00000034573 528.68 4255.30 ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
34. ABRACL ENSGALG00000013826 528.68 4255.30 ABRA C-terminal like [Source:NCBI gene;Acc:770205]
35. AP1B1 ENSGALG00000042213 528.68 4255.30 adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
36. BMS1 ENSGALG00000002624 528.68 4255.30 BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
37. CCT5 ENSGALG00000013041 528.68 4255.30 chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
38. CIRBP ENSGALG00000030918 528.68 4255.30 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
39. COPB1 ENSGALG00000006015 528.68 4255.30 coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
40. COX7C ENSGALG00000027963 528.68 4255.30 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
41. DRG2 ENSGALG00000004953 528.68 4255.30 developmentally regulated GTP binding protein 2 [Source:NCBI gene;Acc:416513]
42. EPCAM ENSGALG00000008969 528.68 4255.30 epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
43. ERH ENSGALG00000017384 528.68 4255.30 ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
44. EVX1 ENSGALG00000037310 528.68 4255.30 even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
45. GTF2H3 ENSGALG00000023682 528.68 4255.30 general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
46. HBE 528.68 4255.30 hemoglobin subunit epsilon
47. HNRNPR ENSGALG00000000814 528.68 4255.30 heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:419570]
48. MIF ENSGALG00000006326 528.68 4255.30 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
49. QSOX2 ENSGALG00000001758 528.68 4255.30 quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
50. RAD23B ENSGALG00000015540 528.68 4255.30 RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
51. RAN ENSGALG00000002569 528.68 4255.30 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
52. RBX1 ENSGALG00000011993 528.68 4255.30 ring-box 1 [Source:NCBI gene;Acc:418001]
53. REPS2 ENSGALG00000016545 528.68 4255.30 RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
54. RPL21 ENSGALG00000027035 528.68 4255.30 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
55. RPL27A ENSGALG00000005948 528.68 4255.30 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
56. RPL38 ENSGALG00000001465 528.68 4255.30 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
57. RPL5 ENSGALG00000005922 528.68 4255.30 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
58. RPL8 ENSGALG00000016232 528.68 4255.30 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
59. RPS24 ENSGALG00000004871 528.68 4255.30 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
60. RPS29 ENSGALG00000012229 528.68 4255.30 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
61. RPS3 ENSGALG00000017330 528.68 4255.30 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
62. RPS4 RPS4 528.68 4255.30
63. SERPINE2 ENSGALG00000005135 528.68 4255.30 serpin family E member 2 [Source:NCBI gene;Acc:424805]
64. SLC25A6_1 ENSGALG00000016691 528.68 4255.30 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
65. SMC4 ENSGALG00000009553 528.68 4255.30 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
66. SNRPD3 ENSGALG00000006596 528.68 4255.30 small nuclear ribonucleoprotein D3 polypeptide [Source:NCBI gene;Acc:416947]
67. Sep-05 Sep-05 528.68 4255.30
68. TCEB1 TCEB1 528.68 4255.30
69. TMSB4X ENSGALG00000026383 528.68 4255.30 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
70. TRA2A ENSGALG00000010973 528.68 4255.30 transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
71. TXN ENSGALG00000015704 528.68 4255.30 thioredoxin [Source:NCBI gene;Acc:396437]
72. TYMS ENSGALG00000014897 528.68 4255.30 thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
73. WDR51B WDR51B 528.68 4255.30
74. YWHAB ENSGALG00000004143 528.68 4255.30 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:NCBI gene;Acc:419190]
75. ACE ENSGALG00000000498 264.34 2127.65 angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
76. ACSF2 ENSGALG00000019768 264.34 2127.65 acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
77. ACTA1 ENSGALG00000011086 264.34 2127.65 actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
78. ACTG1 ENSGALG00000001381 264.34 2127.65 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
79. ACTG1_1 ENSGALG00000001381 264.34 2127.65 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
80. ACTR2 ENSGALG00000008779 264.34 2127.65 ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
81. AIRC AIRC 264.34 2127.65
82. AKAP2 ENSGALG00000015656 264.34 2127.65 A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
83. AMACR ENSGALG00000003326 264.34 2127.65 alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
84. AMD1 ENSGALG00000039575 264.34 2127.65 adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
85. ANKRD10 ENSGALG00000030125 264.34 2127.65 ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
86. ANKRD46 ENSGALG00000041445 264.34 2127.65 ankyrin repeat domain 46, transcript variant X1
87. ANP32B ENSGALG00000037483 264.34 2127.65 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
88. ANP32E ENSGALG00000039891 264.34 2127.65 acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
89. ATP5F1 264.34 2127.65 ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
90. ATP5L ENSGALG00000006899 264.34 2127.65 ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
91. ATP6V0C ENSGALG00000009229 264.34 2127.65 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
92. BRP44 BRP44 264.34 2127.65
93. BRP44L BRP44L 264.34 2127.65
94. BTF3L4 ENSGALG00000010570 264.34 2127.65 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
95. BUB3 ENSGALG00000009681 264.34 2127.65 BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
96. BYSL ENSGALG00000003467 264.34 2127.65 bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
97. C12ORF57 C12ORF57 264.34 2127.65
98. C9orf78 ENSGALG00000004152 264.34 2127.65 chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
99. CDC5L ENSGALG00000016704 264.34 2127.65 cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
100. CENPJ ENSGALG00000017148 264.34 2127.65 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA