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Experiment Chicken_E3_posterior_slice_3, section s44.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-CO3 MT-CO3 4397.91 35398.39
2. MT-ND5 MT-ND5 4397.91 35398.39
3. MT-ATP6 MT-ATP6 3664.92 29498.62
4. gga-mir-3527 gga-mir-3527 3298.43 26548.78
5. MT-CO1 MT-CO1 2931.94 23598.93
6. MT-ND4 MT-ND4 2931.94 23598.93
7. GAPDH ENSGALG00000014442 2198.95 17699.16 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
8. MT-CYB MT-CYB 1832.46 14749.31
9. MT-ND1 MT-ND1 1832.46 14749.31
10. NME2 ENSGALG00000002932 1832.46 14749.31 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
11. XPO5 ENSGALG00000010341 1832.46 14749.31 exportin 5 [Source:NCBI gene;Acc:421450]
12. gga-mir-3533 ENSGALG00000027736 1832.46 14749.31 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
13. EEF1A EEF1A 1465.97 11799.46
14. ENO1 ENSGALG00000002377 1465.97 11799.46 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
15. RAN ENSGALG00000002569 1465.97 11799.46 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
16. ATP6V1G1 ENSGALG00000007190 1099.48 8849.62 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
17. PPIA ENSGALG00000028600 1099.48 8849.62 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
18. RPL5 ENSGALG00000005922 1099.48 8849.62 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
19. Sep-02_1 Sep-02_1 1099.48 8849.62
20. ALS2 ENSGALG00000008415 732.98 5899.69 ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
21. ANP32B ENSGALG00000037483 732.98 5899.69 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
22. ATP6V0C ENSGALG00000009229 732.98 5899.69 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
23. CCNB2 ENSGALG00000004161 732.98 5899.69 cyclin B2 [Source:NCBI gene;Acc:415400]
24. CIRBP ENSGALG00000030918 732.98 5899.69 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
25. CTDP1 ENSGALG00000031461 732.98 5899.69 CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
26. EIF4G2 ENSGALG00000005587 732.98 5899.69 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
27. G3BP2 ENSGALG00000010882 732.98 5899.69 G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
28. GNB1 ENSGALG00000001334 732.98 5899.69 G protein subunit beta 1 [Source:NCBI gene;Acc:419402]
29. H2AFZ ENSGALG00000014023 732.98 5899.69 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
30. HBG1 HBG1 732.98 5899.69
31. HSPA8 ENSGALG00000006512 732.98 5899.69 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
32. MDK ENSGALG00000008367 732.98 5899.69 midkine [Source:NCBI gene;Acc:423196]
33. NONO ENSGALG00000005507 732.98 5899.69 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
34. PPA2 ENSGALG00000010582 732.98 5899.69 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
35. RPL27 ENSGALG00000002837 732.98 5899.69 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
36. RPL27A ENSGALG00000005948 732.98 5899.69 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
37. RPS15 ENSGALG00000015195 732.98 5899.69 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
38. RPS2 ENSGALG00000005490 732.98 5899.69 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
39. RPS23 ENSGALG00000015617 732.98 5899.69 ribosomal protein S23
40. RPS6 ENSGALG00000015082 732.98 5899.69 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
41. RPS7 ENSGALG00000016392 732.98 5899.69 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
42. SFT2D1 ENSGALG00000020005 732.98 5899.69 SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
43. U2AF1 ENSGALG00000016198 732.98 5899.69 U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:395370]
44. YAF2 ENSGALG00000009540 732.98 5899.69 YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
45. YWHAZ ENSGALG00000031387 732.98 5899.69 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
46. ABHD17A ENSGALG00000041163 366.49 2949.85 abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
47. ACTG1 ENSGALG00000001381 366.49 2949.85 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
48. AKAP7 ENSGALG00000029794 366.49 2949.85 A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
49. ALDH1A2 ENSGALG00000004270 366.49 2949.85 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
50. ANKRD11 ENSGALG00000006222 366.49 2949.85 ankyrin repeat domain 11, transcript variant X2
51. AP2B1 ENSGALG00000042125 366.49 2949.85 adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
52. API5 ENSGALG00000037968 366.49 2949.85 apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
53. ATE1 ENSGALG00000009502 366.49 2949.85 arginyltransferase 1 [Source:NCBI gene;Acc:423936]
54. ATP2B4 ENSGALG00000003601 366.49 2949.85 ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
55. ATRX ENSGALG00000007843 366.49 2949.85 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
56. C6ORF192 C6ORF192 366.49 2949.85
57. CDC42 ENSGALG00000004796 366.49 2949.85 cell division cycle 42 [Source:NCBI gene;Acc:395917]
58. CDC42EP4 ENSGALG00000023364 366.49 2949.85 CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
59. CDCA7 ENSGALG00000040833 366.49 2949.85 cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
60. CDK1 ENSGALG00000003085 366.49 2949.85 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
61. CENPL ENSGALG00000038411 366.49 2949.85 centromere protein L [Source:NCBI gene;Acc:426563]
62. CETN1 ENSGALG00000026741 366.49 2949.85 centrin 1 [Source:NCBI gene;Acc:422668]
63. CHD4 ENSGALG00000013565 366.49 2949.85 chromodomain helicase DNA binding protein 4
64. CNN3 ENSGALG00000005597 366.49 2949.85 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
65. COPS4 ENSGALG00000011130 366.49 2949.85 COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
66. COX6C ENSGALG00000035996 366.49 2949.85 cytochrome c oxidase subunit 6C [Source:NCBI gene;Acc:420243]
67. COX7A2L ENSGALG00000037996 366.49 2949.85 cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
68. CRELD2 ENSGALG00000008551 366.49 2949.85 cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
69. CRNKL1 ENSGALG00000008429 366.49 2949.85 crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
70. DAP3 ENSGALG00000019796 366.49 2949.85 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
71. DDX5 ENSGALG00000003532 366.49 2949.85 DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
72. DLC1 ENSGALG00000013715 366.49 2949.85 DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
73. EEF1B2 ENSGALG00000008590 366.49 2949.85 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
74. EEF1D 366.49 2949.85 eukaryotic translation elongation factor 1 delta, transcript variant X13
75. EIF1 ENSGALG00000028517 366.49 2949.85 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
76. EIF3A ENSGALG00000009328 366.49 2949.85 eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
77. EIF3B ENSGALG00000040999 366.49 2949.85 eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
78. EIF3E ENSGALG00000037067 366.49 2949.85 eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
79. EIF3H ENSGALG00000040522 366.49 2949.85 eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
80. EIF4A2 ENSGALG00000008684 366.49 2949.85 eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
81. EIF4A3 ENSGALG00000008530 366.49 2949.85 eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:416704]
82. EIF5 ENSGALG00000011464 366.49 2949.85 eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
83. EIF5A2 ENSGALG00000009309 366.49 2949.85 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
84. ELAVL4 ENSGALG00000010533 366.49 2949.85 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
85. EMC8 ENSGALG00000005744 366.49 2949.85 ER membrane protein complex subunit 8
86. ENSGALG00000009044 ENSGALG00000009044 366.49 2949.85
87. ENSGALG00000012158 ENSGALG00000012158 366.49 2949.85
88. ENSGALG00000012250 ENSGALG00000012250 366.49 2949.85
89. ENSGALG00000017396 ENSGALG00000017396 366.49 2949.85
90. ENSGALG00000018384 ENSGALG00000018384 366.49 2949.85
91. ENSGALG00000023609 ENSGALG00000023609 366.49 2949.85
92. EXO1 ENSGALG00000010748 366.49 2949.85 exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
93. FAM98A ENSGALG00000010428 366.49 2949.85 family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
94. FASN ENSGALG00000040896 366.49 2949.85 fatty acid synthase [Source:NCBI gene;Acc:396061]
95. FBF1 ENSGALG00000002179 366.49 2949.85 Fas binding factor 1 [Source:NCBI gene;Acc:770159]
96. FCF1 ENSGALG00000010275 366.49 2949.85 FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
97. FUNDC2 ENSGALG00000029585 366.49 2949.85 FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
98. GARS ENSGALG00000005694 366.49 2949.85 glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
99. GDI2 ENSGALG00000008169 366.49 2949.85 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
100. GGA.31975 GGA.31975 366.49 2949.85
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA