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Experiment Chicken_E3_posterior_slice_3, section s40.

Sample reads: 124,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 13248.26 106635.33
2. MT-ND5 MT-ND5 8703.80 70056.94
3. MT-ND4 MT-ND4 8549.75 68816.99
4. MT-CYB MT-CYB 6393.05 51457.70
5. MT-CO3 MT-CO3 4467.44 35958.45
6. MT-ND1 MT-ND1 4159.34 33478.55
7. gga-mir-3527 gga-mir-3527 4082.31 32858.54
8. MT-CO1 MT-CO1 1925.62 15499.33
9. gga-mir-3533 ENSGALG00000027736 1386.45 11159.54 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
10. EEF1A EEF1A 1001.32 8059.63
11. GAPDH ENSGALG00000014442 1001.32 8059.63 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
12. PPIA ENSGALG00000028600 847.27 6819.68 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
13. MT-ND2 MT-ND2 693.22 5579.73
14. MT-ND3 MT-ND3 693.22 5579.73
15. CRHOA CRHOA 616.20 4959.80
16. RPL18A 616.20 4959.80 ribosomal protein L18a
17. NME2 ENSGALG00000002932 539.17 4339.78 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
18. RPL15 ENSGALG00000011290 539.17 4339.78 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
19. KRT19 ENSGALG00000019719 462.15 3719.85 keratin 19 [Source:NCBI gene;Acc:395861]
20. RPL12 ENSGALG00000008806 462.15 3719.85 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
21. RPL7 ENSGALG00000035252 462.15 3719.85 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
22. RPS16 ENSGALG00000026490 462.15 3719.85 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
23. RPS27A ENSGALG00000036790 462.15 3719.85 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
24. TTR ENSGALG00000015143 462.15 3719.85 transthyretin [Source:NCBI gene;Acc:396277]
25. ATP6V0C ENSGALG00000009229 385.12 3099.83 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
26. LDHB ENSGALG00000035836 385.12 3099.83 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
27. LUM ENSGALG00000011271 385.12 3099.83 lumican [Source:NCBI gene;Acc:417891]
28. MDK ENSGALG00000008367 385.12 3099.83 midkine [Source:NCBI gene;Acc:423196]
29. RPL21 ENSGALG00000027035 385.12 3099.83 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
30. RPL32 ENSGALG00000027142 385.12 3099.83 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
31. RPS10 ENSGALG00000002813 385.12 3099.83 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
32. CCNB2 ENSGALG00000004161 308.10 2479.90 cyclin B2 [Source:NCBI gene;Acc:415400]
33. DCUN1D2 ENSGALG00000029145 308.10 2479.90 defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
34. EIF1 ENSGALG00000028517 308.10 2479.90 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
35. EIF4G2 ENSGALG00000005587 308.10 2479.90 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
36. ENSGALG00000002696 ENSGALG00000002696 308.10 2479.90
37. ENSGALG00000018386 ENSGALG00000018386 308.10 2479.90
38. ENSGALG00000028992 ENSGALG00000028992 308.10 2479.90
39. MIF ENSGALG00000006326 308.10 2479.90 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
40. NUDT4 ENSGALG00000011285 308.10 2479.90 nudix hydrolase 4, transcript variant X5
41. PCBD1 ENSGALG00000027835 308.10 2479.90 pterin-4 alpha-carbinolamine dehydratase 1 [Source:NCBI gene;Acc:395729]
42. RPL31 ENSGALG00000016775 308.10 2479.90 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
43. RPL4 ENSGALG00000007711 308.10 2479.90 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
44. RPS15A ENSGALG00000006771 308.10 2479.90 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
45. RPS29 ENSGALG00000012229 308.10 2479.90 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
46. RPS3 ENSGALG00000017330 308.10 2479.90 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
47. RPS6 ENSGALG00000015082 308.10 2479.90 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
48. RPS7 ENSGALG00000016392 308.10 2479.90 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
49. SLC25A6_1 ENSGALG00000016691 308.10 2479.90 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
50. SMARCE1 ENSGALG00000003882 308.10 2479.90 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
51. STMN1 ENSGALG00000001475 308.10 2479.90 stathmin 1 [Source:NCBI gene;Acc:396057]
52. TPT1 ENSGALG00000028872 308.10 2479.90 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
53. UBQLN4 ENSGALG00000042214 308.10 2479.90 ubiquilin 4 [Source:NCBI gene;Acc:426353]
54. ACTG1 ENSGALG00000001381 231.07 1859.88 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
55. AKAP12 ENSGALG00000036240 231.07 1859.88 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
56. ANXA2 ENSGALG00000003770 231.07 1859.88 annexin A2 [Source:NCBI gene;Acc:396297]
57. BTF3L4 ENSGALG00000010570 231.07 1859.88 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
58. CBX3 ENSGALG00000011038 231.07 1859.88 chromobox 3 [Source:NCBI gene;Acc:395355]
59. CIRBP ENSGALG00000030918 231.07 1859.88 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
60. COL4A6 ENSGALG00000008266 231.07 1859.88 collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
61. DUT ENSGALG00000038032 231.07 1859.88 deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
62. EEF1B2 ENSGALG00000008590 231.07 1859.88 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
63. EIF3A ENSGALG00000009328 231.07 1859.88 eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
64. EIF4A2 ENSGALG00000008684 231.07 1859.88 eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
65. EIF4EBP1 ENSGALG00000003205 231.07 1859.88 eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
66. ENSGALG00000028649 ENSGALG00000028649 231.07 1859.88
67. FN1 ENSGALG00000003578 231.07 1859.88 fibronectin 1 [Source:NCBI gene;Acc:396133]
68. GDI2 ENSGALG00000008169 231.07 1859.88 GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
69. GNG5 ENSGALG00000027561 231.07 1859.88 G protein subunit gamma 5 [Source:NCBI gene;Acc:424538]
70. GUCA2A ENSGALG00000027269 231.07 1859.88 guanylate cyclase activator 2A [Source:NCBI gene;Acc:419498]
71. HBZ ENSGALG00000023740 231.07 1859.88 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
72. HMGN5 ENSGALG00000007131 231.07 1859.88 high mobility group nucleosome binding domain 5, transcript variant X1
73. HNRNPA3 ENSGALG00000009250 231.07 1859.88 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
74. LYPLA1 ENSGALG00000040421 231.07 1859.88 lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
75. MRPL30 ENSGALG00000016760 231.07 1859.88 mitochondrial ribosomal protein L30
76. OIT3 ENSGALG00000004345 231.07 1859.88 oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
77. PPIB ENSGALG00000002210 231.07 1859.88 peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
78. RAN ENSGALG00000002569 231.07 1859.88 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
79. RPL13 ENSGALG00000006179 231.07 1859.88 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
80. RPL27 ENSGALG00000002837 231.07 1859.88 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
81. RPL27A ENSGALG00000005948 231.07 1859.88 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
82. RPL36 ENSGALG00000000474 231.07 1859.88 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
83. RPL5 ENSGALG00000005922 231.07 1859.88 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
84. RPL7A ENSGALG00000003197 231.07 1859.88 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
85. RPS2 ENSGALG00000005490 231.07 1859.88 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
86. RPS20 ENSGALG00000014432 231.07 1859.88 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
87. RPS23 ENSGALG00000015617 231.07 1859.88 ribosomal protein S23
88. TRA2B ENSGALG00000006531 231.07 1859.88 transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
89. YWHAZ ENSGALG00000031387 231.07 1859.88 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
90. ZDHHC6 ENSGALG00000008870 231.07 1859.88 zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
91. ACTG1_1 ENSGALG00000001381 154.05 1239.95 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
92. AGR2 ENSGALG00000010825 154.05 1239.95 anterior gradient 2, protein disulphide isomerase family member [Source:HGNC Symbol;Acc:HGNC:328]
93. AHCY ENSGALG00000033677 154.05 1239.95 adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
94. AIMP1 ENSGALG00000010553 154.05 1239.95 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
95. AP3D1 ENSGALG00000000996 154.05 1239.95 adaptor related protein complex 3 delta 1 subunit, transcript variant X2
96. ATF4 ENSGALG00000012135 154.05 1239.95 activating transcription factor 4 [Source:NCBI gene;Acc:395693]
97. ATP5G3 154.05 1239.95 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
98. ATP6V1G1 ENSGALG00000007190 154.05 1239.95 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
99. BTF3 ENSGALG00000013512 154.05 1239.95 basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
100. CANX ENSGALG00000032148 154.05 1239.95 calnexin [Source:NCBI gene;Acc:416288]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA