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Experiment Chicken_E3_posterior_slice_2, section s19.

Sample reads: 124,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 8272.88 66589.00
2. MT-CYB MT-CYB 6204.66 49941.75
3. MT-ND5 MT-ND5 5392.14 43401.72
4. MT-ND4 MT-ND4 5207.48 41915.38
5. MT-CO3 MT-CO3 4948.95 39834.45
6. gga-mir-3527 gga-mir-3527 3176.19 25565.38
7. GAPDH ENSGALG00000014442 2733.00 21998.11 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
8. MT-ND1 MT-ND1 2215.95 17836.34
9. EEF1A EEF1A 1698.89 13674.49
10. MT-CO1 MT-CO1 1255.70 10107.22
11. ENO1 ENSGALG00000002377 1107.97 8918.13 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
12. gga-mir-3533 ENSGALG00000027736 997.18 8026.37 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
13. PPIA ENSGALG00000028600 960.24 7729.04 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
14. ENSGALG00000002696 ENSGALG00000002696 775.58 6242.70
15. LDHB ENSGALG00000035836 664.78 5350.86 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
16. RPL26 RPL26 627.85 5053.61
17. RPS6 ENSGALG00000015082 627.85 5053.61 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
18. MT-ND2 MT-ND2 553.99 4459.11
19. MT-ND3 MT-ND3 553.99 4459.11
20. RPL31 ENSGALG00000016775 553.99 4459.11 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
21. RPS7 ENSGALG00000016392 517.05 4161.77 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
22. EIF4G2 ENSGALG00000005587 480.12 3864.52 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
23. RPL15 ENSGALG00000011290 480.12 3864.52 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
24. RPL7A ENSGALG00000003197 480.12 3864.52 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
25. RPS23 ENSGALG00000015617 480.12 3864.52 ribosomal protein S23
26. RPL38 ENSGALG00000001465 443.19 3567.27 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
27. RPL5 ENSGALG00000005922 443.19 3567.27 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
28. FKBP4 ENSGALG00000014331 406.26 3270.02 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
29. MIF ENSGALG00000006326 406.26 3270.02 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
30. RPL8 ENSGALG00000016232 406.26 3270.02 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
31. RPLP0 ENSGALG00000023294 406.26 3270.02 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
32. RPL14 ENSGALG00000043379 369.32 2972.68 ribosomal protein L14
33. RPS16 ENSGALG00000026490 369.32 2972.68 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
34. RPS8 ENSGALG00000010124 369.32 2972.68 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
35. STMN1 ENSGALG00000001475 369.32 2972.68 stathmin 1 [Source:NCBI gene;Acc:396057]
36. ATP6V0C ENSGALG00000009229 332.39 2675.43 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
37. CIRBP ENSGALG00000030918 332.39 2675.43 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
38. ENSGALG00000018386 ENSGALG00000018386 332.39 2675.43
39. HSPA8 ENSGALG00000006512 332.39 2675.43 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
40. NME2 ENSGALG00000002932 332.39 2675.43 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
41. RPL23 ENSGALG00000001634 332.39 2675.43 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
42. RPS15A ENSGALG00000006771 332.39 2675.43 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
43. RPS3 ENSGALG00000017330 332.39 2675.43 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
44. ATP5G3 295.46 2378.18 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
45. H2AFZ ENSGALG00000014023 295.46 2378.18 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
46. RPL18A 295.46 2378.18 ribosomal protein L18a
47. RPLP1 ENSGALG00000030878 295.46 2378.18 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
48. RPS29 ENSGALG00000012229 295.46 2378.18 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
49. ENSGALG00000018384 ENSGALG00000018384 258.53 2080.93
50. H3-IX H3-IX 258.53 2080.93
51. KPNA2 ENSGALG00000003584 258.53 2080.93 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
52. PGK1 ENSGALG00000007936 258.53 2080.93 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
53. PSME3 ENSGALG00000002937 258.53 2080.93 proteasome activator subunit 3 [Source:NCBI gene;Acc:420017]
54. RPL13 ENSGALG00000006179 258.53 2080.93 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
55. RPL27A ENSGALG00000005948 258.53 2080.93 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
56. RPL32 ENSGALG00000027142 258.53 2080.93 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
57. RPS12 ENSGALG00000013990 258.53 2080.93 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
58. RPS21 ENSGALG00000005338 258.53 2080.93 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
59. RPS27A ENSGALG00000036790 258.53 2080.93 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
60. CCNB2 ENSGALG00000004161 221.59 1783.59 cyclin B2 [Source:NCBI gene;Acc:415400]
61. CRABP-I ENSGALG00000003193 221.59 1783.59 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
62. CRHOA CRHOA 221.59 1783.59
63. EIF5 ENSGALG00000011464 221.59 1783.59 eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
64. ENSGALG00000028649 ENSGALG00000028649 221.59 1783.59
65. HMGN5 ENSGALG00000007131 221.59 1783.59 high mobility group nucleosome binding domain 5, transcript variant X1
66. HSP90AA1 ENSGALG00000033212 221.59 1783.59 heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
67. RPL23A ENSGALG00000003966 221.59 1783.59 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
68. RPL27 ENSGALG00000002837 221.59 1783.59 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
69. RPL35A ENSGALG00000007611, ENSGALG00000041230 221.59 1783.59 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
70. RPSA 221.59 1783.59 ribosomal protein SA
71. SLC25A6 ENSGALG00000016691 221.59 1783.59 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
72. SLC25A6_1 ENSGALG00000016691 221.59 1783.59 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
73. VPS29 ENSGALG00000004529 221.59 1783.59 VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
74. ANP32B ENSGALG00000037483 184.66 1486.34 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
75. ATP6V1G1 ENSGALG00000007190 184.66 1486.34 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
76. CALM CALM 184.66 1486.34
77. CCT6 CCT6 184.66 1486.34
78. CISD2 ENSGALG00000027860 184.66 1486.34 CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]
79. DDT ENSGALG00000006350 184.66 1486.34 D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
80. EIF1 ENSGALG00000028517 184.66 1486.34 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
81. EIF3M ENSGALG00000012109 184.66 1486.34 eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
82. ENSGALG00000016007 ENSGALG00000016007 184.66 1486.34
83. HNRNPDL ENSGALG00000023199 184.66 1486.34 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
84. HSPE1 ENSGALG00000009070 184.66 1486.34 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
85. MDH1 ENSGALG00000008858 184.66 1486.34 malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
86. PDIA6 ENSGALG00000016447 184.66 1486.34 protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
87. PLS3 ENSGALG00000005930 184.66 1486.34 plastin 3 [Source:NCBI gene;Acc:422222]
88. PRDX1 ENSGALG00000010243 184.66 1486.34 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
89. RPL7 ENSGALG00000035252 184.66 1486.34 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
90. RPS14 ENSGALG00000004588 184.66 1486.34 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
91. RPS15 ENSGALG00000015195 184.66 1486.34 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
92. RPS2 ENSGALG00000005490 184.66 1486.34 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
93. SNRPE ENSGALG00000000137 184.66 1486.34 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
94. TXN ENSGALG00000015704 184.66 1486.34 thioredoxin [Source:NCBI gene;Acc:396437]
95. UCH-L1 UCH-L1 184.66 1486.34
96. AKAP12 ENSGALG00000036240 147.73 1189.09 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
97. C5H14ORF166 C5H14ORF166 147.73 1189.09
98. C5ORF13 C5ORF13 147.73 1189.09
99. CLTA ENSGALG00000015326 147.73 1189.09 clathrin light chain A [Source:NCBI gene;Acc:427284]
100. COX7C ENSGALG00000027963 147.73 1189.09 cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA