Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Chicken_E3_posterior_slice_2, section s18.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 8789.23 70743.41
2. MT-ND4 MT-ND4 7448.50 59952.04
3. MT-CYB MT-CYB 6256.74 50359.71
4. MT-CO3 MT-CO3 4916.01 39568.35
5. gga-mir-3527 gga-mir-3527 3277.34 26378.90
6. EEF1A EEF1A 2979.40 23980.82
7. MT-ND5 MT-ND5 2979.40 23980.82
8. GAPDH ENSGALG00000014442 2681.46 21582.73 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
9. MT-CO1 MT-CO1 2383.52 19184.65
10. MT-ND3 MT-ND3 1191.76 9592.33
11. MT-ND1 MT-ND1 1042.79 8393.29
12. RPS7 ENSGALG00000016392 1042.79 8393.29 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
13. gga-mir-3533 ENSGALG00000027736 1042.79 8393.29 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
14. ATP6V0C ENSGALG00000009229 744.85 5995.20 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
15. NDUFB9 ENSGALG00000042242 744.85 5995.20 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
16. RPL26 RPL26 744.85 5995.20
17. RRM1 ENSGALG00000017350 744.85 5995.20 ribonucleotide reductase catalytic subunit M1 [Source:NCBI gene;Acc:419081]
18. SLC25A6_1 ENSGALG00000016691 744.85 5995.20 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
19. EIF4G2 ENSGALG00000005587 595.88 4796.16 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
20. RPL27A ENSGALG00000005948 595.88 4796.16 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
21. RPL38 ENSGALG00000001465 595.88 4796.16 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
22. RPL7A ENSGALG00000003197 595.88 4796.16 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
23. RPS3 ENSGALG00000017330 595.88 4796.16 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
24. ACAA2 ENSGALG00000031142 446.91 3597.12 acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
25. CRHOA CRHOA 446.91 3597.12
26. EIF1 ENSGALG00000028517 446.91 3597.12 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
27. ENSGALG00000002696 ENSGALG00000002696 446.91 3597.12
28. FKBP4 ENSGALG00000014331 446.91 3597.12 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
29. HNRNPDL ENSGALG00000023199 446.91 3597.12 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
30. MT-ND2 MT-ND2 446.91 3597.12
31. NCAM1 ENSGALG00000007839 446.91 3597.12 Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
32. NME2 ENSGALG00000002932 446.91 3597.12 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
33. OAZ OAZ 446.91 3597.12
34. RPL23 ENSGALG00000001634 446.91 3597.12 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
35. RPL32 ENSGALG00000027142 446.91 3597.12 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
36. RPL4 ENSGALG00000007711 446.91 3597.12 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
37. RPL5 ENSGALG00000005922 446.91 3597.12 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
38. RPL7 ENSGALG00000035252 446.91 3597.12 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
39. RPL8 ENSGALG00000016232 446.91 3597.12 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
40. RPS10 ENSGALG00000002813 446.91 3597.12 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
41. RPS20 ENSGALG00000014432 446.91 3597.12 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
42. STMN1 ENSGALG00000001475 446.91 3597.12 stathmin 1 [Source:NCBI gene;Acc:396057]
43. TCP1 ENSGALG00000011637 446.91 3597.12 t-complex 1 [Source:NCBI gene;Acc:421586]
44. ALDH1A2 ENSGALG00000004270 297.94 2398.08 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
45. AP2B1 ENSGALG00000042125 297.94 2398.08 adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
46. AP3S1 ENSGALG00000002341 297.94 2398.08 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
47. ASNS ENSGALG00000009748 297.94 2398.08 asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
48. ATP5C1 297.94 2398.08 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
49. BTF3 ENSGALG00000013512 297.94 2398.08 basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
50. CALM CALM 297.94 2398.08
51. CAPZB ENSGALG00000004034 297.94 2398.08 capping actin protein of muscle Z-line beta subunit [Source:NCBI gene;Acc:396418]
52. CDC27 ENSGALG00000000596 297.94 2398.08 cell division cycle 27 [Source:NCBI gene;Acc:419960]
53. CDC42SE1 ENSGALG00000028119 297.94 2398.08 CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
54. CENPE ENSGALG00000013208 297.94 2398.08 centromere protein E, transcript variant X4
55. CIRBP ENSGALG00000030918 297.94 2398.08 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
56. CLTA ENSGALG00000015326 297.94 2398.08 clathrin light chain A [Source:NCBI gene;Acc:427284]
57. CTNNB1 ENSGALG00000037203 297.94 2398.08 catenin beta 1 [Source:NCBI gene;Acc:395964]
58. DDX3X ENSGALG00000016231 297.94 2398.08 DEAD-box helicase 3 X-linked [Source:NCBI gene;Acc:418567]
59. DUSP19 ENSGALG00000043268 297.94 2398.08 dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
60. EI24 ENSGALG00000038097 297.94 2398.08 EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
61. EIF3M ENSGALG00000012109 297.94 2398.08 eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
62. EMC2 ENSGALG00000040325 297.94 2398.08 ER membrane protein complex subunit 2 [Source:NCBI gene;Acc:420273]
63. ENO1 ENSGALG00000002377 297.94 2398.08 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
64. ENSGALG00000018386 ENSGALG00000018386 297.94 2398.08
65. GCLM ENSGALG00000005782 297.94 2398.08 glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
66. GOLPH3 ENSGALG00000028267 297.94 2398.08 golgi phosphoprotein 3, transcript variant X1
67. H3-IX H3-IX 297.94 2398.08
68. HMGN5 ENSGALG00000007131 297.94 2398.08 high mobility group nucleosome binding domain 5, transcript variant X1
69. HNRNPA3 ENSGALG00000009250 297.94 2398.08 heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]
70. HSP90AA1 ENSGALG00000033212 297.94 2398.08 heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
71. HSPE1 ENSGALG00000009070 297.94 2398.08 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
72. IGF2BP3 ENSGALG00000010961 297.94 2398.08 insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
73. IRAK2 ENSGALG00000008407 297.94 2398.08 interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
74. KPNA2 ENSGALG00000003584 297.94 2398.08 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
75. LARP1 ENSGALG00000040109 297.94 2398.08 La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
76. MAGOH 297.94 2398.08 mago homolog, exon junction complex core component
77. MDH1 ENSGALG00000008858 297.94 2398.08 malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
78. MRPL17 ENSGALG00000002605 297.94 2398.08 mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
79. MRPL19 ENSGALG00000016731 297.94 2398.08 mitochondrial ribosomal protein L19, transcript variant X1
80. NCOA4 ENSGALG00000002066 297.94 2398.08 nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
81. NDUFA9 ENSGALG00000017282 297.94 2398.08 NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
82. PEBP1 ENSGALG00000007403 297.94 2398.08 phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
83. PRDX4 ENSGALG00000016357 297.94 2398.08 peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
84. PTBP1 ENSGALG00000001962 297.94 2398.08 polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
85. RPL12 ENSGALG00000008806 297.94 2398.08 ribosomal protein L12 [Source:NCBI gene;Acc:417264]
86. RPL21 ENSGALG00000027035 297.94 2398.08 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
87. RPS13 ENSGALG00000006096 297.94 2398.08 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
88. RPS2 ENSGALG00000005490 297.94 2398.08 ribosomal protein S2 [Source:NCBI gene;Acc:416544]
89. RPS23 ENSGALG00000015617 297.94 2398.08 ribosomal protein S23
90. RPSA 297.94 2398.08 ribosomal protein SA
91. RTN4IP1 ENSGALG00000015343 297.94 2398.08 reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
92. SAAL1 ENSGALG00000026111 297.94 2398.08 serum amyloid A like 1
93. SNRPD1 ENSGALG00000041334 297.94 2398.08 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
94. SYNCRIP ENSGALG00000015830 297.94 2398.08 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
95. TAX1BP3 ENSGALG00000004618 297.94 2398.08 Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
96. TM9SF3 ENSGALG00000005534 297.94 2398.08 transmembrane 9 superfamily member 3
97. TPT1 ENSGALG00000028872 297.94 2398.08 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
98. TRAM1 ENSGALG00000041112 297.94 2398.08 translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
99. TYMS ENSGALG00000014897 297.94 2398.08 thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
100. ABCD3 ENSGALG00000005647 148.97 1199.04 ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA