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Experiment Chicken_E3_posterior_slice_2, section s16.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 7247.39 58333.41
2. MT-CO1 MT-CO1 4141.36 33333.33
3. MT-ND4 MT-ND4 4141.36 33333.33
4. MT-CO3 MT-CO3 3106.02 25000.00
5. MT-ND3 MT-ND3 3106.02 25000.00
6. MT-ND5 MT-ND5 3106.02 25000.00
7. NME2 ENSGALG00000002932 3106.02 25000.00 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
8. H2AFZ ENSGALG00000014023 2070.68 16666.67 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
9. MT-CYB MT-CYB 2070.68 16666.67
10. RPL7A ENSGALG00000003197 2070.68 16666.67 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
11. gga-mir-3527 gga-mir-3527 2070.68 16666.67
12. ACVR1 ENSGALG00000037301 1035.34 8333.33 activin A receptor type 1 [Source:NCBI gene;Acc:395246]
13. AKAP12 ENSGALG00000036240 1035.34 8333.33 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
14. AMFR ENSGALG00000003107 1035.34 8333.33 autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
15. ANAPC2 ENSGALG00000008625 1035.34 8333.33 anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
16. AP1G1 1035.34 8333.33 adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
17. BTBD1 ENSGALG00000006020 1035.34 8333.33 BTB domain containing 1 [Source:NCBI gene;Acc:415461]
18. CADM1 ENSGALG00000014582 1035.34 8333.33 cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
19. CAPZA2 ENSGALG00000043437 1035.34 8333.33 capping actin protein of muscle Z-line alpha subunit 2 [Source:NCBI gene;Acc:417771]
20. CCT6 CCT6 1035.34 8333.33
21. CDH3 1035.34 8333.33 cadherin 3
22. CIRBP ENSGALG00000030918 1035.34 8333.33 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
23. CNDP2 ENSGALG00000019514 1035.34 8333.33 carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
24. COX6A1 ENSGALG00000007205 1035.34 8333.33 cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
25. DDX3X ENSGALG00000016231 1035.34 8333.33 DEAD-box helicase 3 X-linked [Source:NCBI gene;Acc:418567]
26. DDX5 ENSGALG00000003532 1035.34 8333.33 DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
27. EEF1A EEF1A 1035.34 8333.33
28. EIF1 ENSGALG00000028517 1035.34 8333.33 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
29. EIF3A ENSGALG00000009328 1035.34 8333.33 eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
30. EMC1 ENSGALG00000003969 1035.34 8333.33 ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
31. EMC6 ENSGALG00000026492 1035.34 8333.33 ER membrane protein complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:28430]
32. ENO1 ENSGALG00000002377 1035.34 8333.33 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
33. ENSGALG00000002696 ENSGALG00000002696 1035.34 8333.33
34. ENSGALG00000018384 ENSGALG00000018384 1035.34 8333.33
35. ERLIN2 ENSGALG00000003092 1035.34 8333.33 ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
36. FAM174A ENSGALG00000026203 1035.34 8333.33 family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
37. FBXL21 ENSGALG00000006327 1035.34 8333.33 F-box and leucine rich repeat protein 21 [Source:NCBI gene;Acc:416306]
38. FKBP4 ENSGALG00000014331 1035.34 8333.33 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
39. GAPDH ENSGALG00000014442 1035.34 8333.33 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
40. H3-IX H3-IX 1035.34 8333.33
41. HIBCH ENSGALG00000043307 1035.34 8333.33 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
42. HOXA4 ENSGALG00000022622 1035.34 8333.33 homeobox A4 [Source:NCBI gene;Acc:395307]
43. HOXB2 ENSGALG00000025774 1035.34 8333.33 homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
44. IFT57 ENSGALG00000015356 1035.34 8333.33 intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
45. KDM4B ENSGALG00000034592 1035.34 8333.33 lysine demethylase 4B, transcript variant X8
46. MAMDC2 ENSGALG00000015115 1035.34 8333.33 MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
47. MDH2 ENSGALG00000001949 1035.34 8333.33 malate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:6971]
48. MEX3A ENSGALG00000014016 1035.34 8333.33 mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
49. MIF ENSGALG00000006326 1035.34 8333.33 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
50. MIPEP ENSGALG00000017118 1035.34 8333.33 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
51. MRPL21 ENSGALG00000004362 1035.34 8333.33 mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
52. MSH6 ENSGALG00000008957 1035.34 8333.33 mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
53. MT-ND1 MT-ND1 1035.34 8333.33
54. MT-ND2 MT-ND2 1035.34 8333.33
55. NANS ENSGALG00000015320 1035.34 8333.33 N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
56. NDUFB5 ENSGALG00000009076 1035.34 8333.33 NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
57. NDUFS5 ENSGALG00000003625 1035.34 8333.33 NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
58. NTPCR ENSGALG00000011015 1035.34 8333.33 nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
59. NUP133 ENSGALG00000011091 1035.34 8333.33 nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
60. NUP153 ENSGALG00000012720 1035.34 8333.33 nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
61. NUP188 ENSGALG00000043394 1035.34 8333.33 nucleoporin 188 [Source:NCBI gene;Acc:417198]
62. OAZ2 ENSGALG00000036288 1035.34 8333.33 Gallus gallus ornithine decarboxylase antizyme 2 (OAZ2), mRNA. [Source:RefSeq mRNA;Acc:NM_001142862]
63. PPP2CA ENSGALG00000006462 1035.34 8333.33 protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
64. PRIM2 ENSGALG00000016278 1035.34 8333.33 DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
65. PSMD14 ENSGALG00000011128 1035.34 8333.33 proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
66. RBPMS_1 ENSGALG00000010291 1035.34 8333.33 RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
67. RNF126 ENSGALG00000042948 1035.34 8333.33 ring finger protein 126 [Source:NCBI gene;Acc:420085]
68. RPL10A ENSGALG00000002644 1035.34 8333.33 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
69. RPL31 ENSGALG00000016775 1035.34 8333.33 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
70. RPL36 ENSGALG00000000474 1035.34 8333.33 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
71. RPL5 ENSGALG00000005922 1035.34 8333.33 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
72. RPS12 ENSGALG00000013990 1035.34 8333.33 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
73. RPS13 ENSGALG00000006096 1035.34 8333.33 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
74. RPS6 ENSGALG00000015082 1035.34 8333.33 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
75. RPSA 1035.34 8333.33 ribosomal protein SA
76. RWDD3 ENSGALG00000038421 1035.34 8333.33 RWD domain containing 3 [Source:NCBI gene;Acc:424481]
77. SET ENSGALG00000004701 1035.34 8333.33 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
78. SH3BGRL ENSGALG00000007128 1035.34 8333.33 SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
79. SLC12A4 ENSGALG00000034179 1035.34 8333.33 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
80. SMARCD2 ENSGALG00000029304 1035.34 8333.33 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
81. SNRPE ENSGALG00000000137 1035.34 8333.33 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
82. SP4 ENSGALG00000039454 1035.34 8333.33 Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
83. SPAG1 ENSGALG00000033254 1035.34 8333.33 sperm associated antigen 1 [Source:HGNC Symbol;Acc:HGNC:11212]
84. SPC25 ENSGALG00000010900 1035.34 8333.33 SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
85. SSR2 ENSGALG00000000764 1035.34 8333.33 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
86. TAX1BP3 ENSGALG00000004618 1035.34 8333.33 Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
87. TCF21 ENSGALG00000029024 1035.34 8333.33 transcription factor 21 [Source:NCBI gene;Acc:421697]
88. THG1L ENSGALG00000003722 1035.34 8333.33 tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
89. TUBB2B ENSGALG00000012821 1035.34 8333.33 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
90. USP9X ENSGALG00000016236 1035.34 8333.33 ubiquitin specific peptidase 9, X-linked, transcript variant X3
91. ZC3H15 ENSGALG00000041857 1035.34 8333.33 zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
92. ZFAND5 ENSGALG00000015144 1035.34 8333.33 zinc finger AN1-type containing 5 [Source:NCBI gene;Acc:427254]
93. ZNF207 ENSGALG00000003454 1035.34 8333.33 zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]
94. ZNF367 ENSGALG00000012629 1035.34 8333.33 zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
95. ZNF384 ENSGALG00000032599 1035.34 8333.33 zinc finger protein 384 [Source:NCBI gene;Acc:770350]
96. gga-mir-3533 ENSGALG00000027736 1035.34 8333.33 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
97. 5 5 0.00 0.00
98. 5-MCDG 5-MCDG 0.00 0.00
99. 5S 5S 0.00 0.00
100. 5S_1 5S_1 0.00 0.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA