Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_anterior_slice_2, section s46.

Sample reads: 124,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ND4 MT-ND4 5502.17 44285.59
2. MT-ATP6 MT-ATP6 4961.78 39936.12
3. MT-ND5 MT-ND5 4470.51 35982.01
4. MT-CO3 MT-CO3 4274.01 34400.43
5. gga-mir-3527 gga-mir-3527 3438.85 27678.44
6. MT-CYB MT-CYB 3340.60 26887.65
7. MT-ND1 MT-ND1 2947.59 23724.41
8. EEF1A EEF1A 2407.20 19374.95
9. MT-CO1 MT-CO1 2259.82 18188.72
10. GAPDH ENSGALG00000014442 1817.68 14630.05 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
11. gga-mir-3533 ENSGALG00000027736 1080.78 8698.93 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. ENSGALG00000018384 ENSGALG00000018384 933.40 7512.70
13. MT-ND2 MT-ND2 835.15 6721.91
14. RPL26 RPL26 736.90 5931.12
15. EIF4G2 ENSGALG00000005587 687.77 5535.69 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
16. HBE 638.64 5140.25 hemoglobin subunit epsilon
17. RPL7A ENSGALG00000003197 638.64 5140.25 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
18. ENO1 ENSGALG00000002377 589.52 4744.90 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
19. PPIA ENSGALG00000028600 589.52 4744.90 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
20. STMN1 ENSGALG00000001475 589.52 4744.90 stathmin 1 [Source:NCBI gene;Acc:396057]
21. ALDH1A2 ENSGALG00000004270 491.26 3954.03 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
22. CIRBP ENSGALG00000030918 491.26 3954.03 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
23. MT-ND3 MT-ND3 491.26 3954.03
24. HBZ ENSGALG00000023740 442.14 3558.67 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
25. MDK ENSGALG00000008367 442.14 3558.67 midkine [Source:NCBI gene;Acc:423196]
26. RPL21 ENSGALG00000027035 442.14 3558.67 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
27. RPL8 ENSGALG00000016232 442.14 3558.67 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
28. RPS7 ENSGALG00000016392 442.14 3558.67 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
29. CBX3 ENSGALG00000011038 393.01 3163.24 chromobox 3 [Source:NCBI gene;Acc:395355]
30. HBG1 HBG1 393.01 3163.24
31. LDHB ENSGALG00000035836 393.01 3163.24 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
32. RPS6 ENSGALG00000015082 393.01 3163.24 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
33. ENSGALG00000028992 ENSGALG00000028992 343.89 2767.88
34. RPL14 ENSGALG00000043379 343.89 2767.88 ribosomal protein L14
35. RPL37 ENSGALG00000014833 343.89 2767.88 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
36. RPL5 ENSGALG00000005922 343.89 2767.88 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
37. RPL6 ENSGALG00000004818 343.89 2767.88 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
38. RPS15 ENSGALG00000015195 343.89 2767.88 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
39. RPS29 ENSGALG00000012229 343.89 2767.88 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
40. SLC25A3 ENSGALG00000011514 343.89 2767.88 solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
41. CRHOA CRHOA 294.76 2372.45
42. EEF1B2 ENSGALG00000008590 294.76 2372.45 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
43. FKBP4 ENSGALG00000014331 294.76 2372.45 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
44. NME2 ENSGALG00000002932 294.76 2372.45 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
45. RPL23A ENSGALG00000003966 294.76 2372.45 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
46. RPL27 ENSGALG00000002837 294.76 2372.45 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
47. RPS16 ENSGALG00000026490 294.76 2372.45 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
48. RPS23 ENSGALG00000015617 294.76 2372.45 ribosomal protein S23
49. TPT1 ENSGALG00000028872 294.76 2372.45 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
50. ARF4 ENSGALG00000005622 245.63 1977.01 ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
51. ATP6V0C ENSGALG00000009229 245.63 1977.01 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
52. CADM1 ENSGALG00000014582 245.63 1977.01 cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
53. DDX3X ENSGALG00000016231 245.63 1977.01 DEAD-box helicase 3 X-linked [Source:NCBI gene;Acc:418567]
54. EIF3F ENSGALG00000005326 245.63 1977.01 eukaryotic translation initiation factor 3 subunit F
55. HMGN5 ENSGALG00000007131 245.63 1977.01 high mobility group nucleosome binding domain 5, transcript variant X1
56. HNRNPA2B1 ENSGALG00000011036 245.63 1977.01 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
57. HSPA8 ENSGALG00000006512 245.63 1977.01 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
58. NDUFB9 ENSGALG00000042242 245.63 1977.01 NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
59. NR2F1 ENSGALG00000027907 245.63 1977.01 nuclear receptor subfamily 2 group F member 1 [Source:HGNC Symbol;Acc:HGNC:7975]
60. PARVB ENSGALG00000014201 245.63 1977.01 parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
61. RPL13 ENSGALG00000006179 245.63 1977.01 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
62. RPL15 ENSGALG00000011290 245.63 1977.01 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
63. RPL32 ENSGALG00000027142 245.63 1977.01 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
64. RPL36 ENSGALG00000000474 245.63 1977.01 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
65. RPL4 ENSGALG00000007711 245.63 1977.01 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
66. RPS4 RPS4 245.63 1977.01
67. RPSA 245.63 1977.01 ribosomal protein SA
68. ARPC1A ENSGALG00000004693 196.51 1581.66 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
69. CCT6 CCT6 196.51 1581.66
70. CHCHD3 ENSGALG00000006489 196.51 1581.66 coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
71. EIF1 ENSGALG00000028517 196.51 1581.66 eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
72. EIF5A2 ENSGALG00000009309 196.51 1581.66 eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
73. GLRX3 ENSGALG00000010464 196.51 1581.66 glutaredoxin 3 [Source:NCBI gene;Acc:423968]
74. HNRNPAB ENSGALG00000014381 196.51 1581.66 heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
75. ITGB1BP3 ENSGALG00000030120 196.51 1581.66 integrin beta 1 binding protein 3 [Source:NCBI gene;Acc:415448]
76. KPNA2 ENSGALG00000003584 196.51 1581.66 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
77. MDH1 ENSGALG00000008858 196.51 1581.66 malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
78. MEIS2 ENSGALG00000039118 196.51 1581.66 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
79. NONO ENSGALG00000005507 196.51 1581.66 non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
80. PARP1 ENSGALG00000009228 196.51 1581.66 poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
81. PEBP1 ENSGALG00000007403 196.51 1581.66 phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
82. PGK1 ENSGALG00000007936 196.51 1581.66 phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
83. PSMA2 ENSGALG00000039387 196.51 1581.66 proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
84. RPL31 ENSGALG00000016775 196.51 1581.66 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
85. RPL7 ENSGALG00000035252 196.51 1581.66 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
86. RPLP1 ENSGALG00000030878 196.51 1581.66 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
87. RPS13 ENSGALG00000006096 196.51 1581.66 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
88. RPS15A ENSGALG00000006771 196.51 1581.66 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
89. RPS27A ENSGALG00000036790 196.51 1581.66 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
90. RPS3 ENSGALG00000017330 196.51 1581.66 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
91. RPS3A ENSGALG00000010077 196.51 1581.66 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
92. RTN4 ENSGALG00000029261 196.51 1581.66 reticulon 4 [Source:NCBI gene;Acc:378790]
93. SLC25A6_1 ENSGALG00000016691 196.51 1581.66 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
94. SNRPE ENSGALG00000000137 196.51 1581.66 small nuclear ribonucleoprotein polypeptide E [Source:NCBI gene;Acc:396180]
95. SUMO1 ENSGALG00000008435 196.51 1581.66 small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
96. VCP ENSGALG00000001986 196.51 1581.66 valosin containing protein [Source:NCBI gene;Acc:427410]
97. YWHAZ ENSGALG00000031387 196.51 1581.66 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
98. ZNF644 ENSGALG00000034253 196.51 1581.66 zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
99. ANP32B ENSGALG00000037483 147.38 1186.22 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
100. AP1M1 ENSGALG00000003959 147.38 1186.22 adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA