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Experiment Chicken_E3_anterior_slice_2, section s40.

Sample reads: 124,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. ENSGALG00000018384 ENSGALG00000018384 4540.94 36549.35
2. MT-ATP6 MT-ATP6 3896.14 31359.45
3. MT-CO3 MT-CO3 3535.16 28453.98
4. MT-ND5 MT-ND5 3467.94 27912.93
5. EEF1A EEF1A 2091.22 16831.92
6. gga-mir-3527 gga-mir-3527 1989.15 16010.37
7. MT-ND4 MT-ND4 1862.18 14988.41
8. MT-CO1 MT-CO1 1745.17 14046.61
9. MT-CYB MT-CYB 1650.57 13285.19
10. MT-ND1 MT-ND1 1546.01 12443.60
11. gga-mir-3533 ENSGALG00000027736 1366.76 11000.85 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. GAPDH ENSGALG00000014442 1194.98 9618.22 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
13. MT-ND2 MT-ND2 1152.66 9277.59
14. ENSGALG00000018386 ENSGALG00000018386 1020.71 8215.54
15. MT-ND3 MT-ND3 946.03 7614.45
16. NME2 ENSGALG00000002932 766.78 6171.70 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
17. PPIA ENSGALG00000028600 754.33 6071.49 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
18. MDK ENSGALG00000008367 664.71 5350.15 midkine [Source:NCBI gene;Acc:423196]
19. RPL8 ENSGALG00000016232 515.34 4147.89 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
20. RPL5 ENSGALG00000005922 512.85 4127.85 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
21. RPL7 ENSGALG00000035252 490.44 3947.48 ribosomal protein L7 [Source:NCBI gene;Acc:420182]
22. RPS3 ENSGALG00000017330 487.95 3927.44 ribosomal protein S3 [Source:NCBI gene;Acc:419069]
23. RPL27A ENSGALG00000005948 485.46 3907.40 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
24. RPL26 RPL26 480.48 3867.31
25. RPL15 ENSGALG00000011290 460.57 3707.06 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
26. RPS7 ENSGALG00000016392 460.57 3707.06 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
27. HMGN5 ENSGALG00000007131 440.65 3546.73 high mobility group nucleosome binding domain 5, transcript variant X1
28. RPS10 ENSGALG00000002813 430.69 3466.56 ribosomal protein S10 [Source:NCBI gene;Acc:419904]
29. STMN1 ENSGALG00000001475 413.27 3326.35 stathmin 1 [Source:NCBI gene;Acc:396057]
30. ALDH1A2 ENSGALG00000004270 398.33 3206.10 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
31. RPL21 ENSGALG00000027035 398.33 3206.10 ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
32. EIF4G2 ENSGALG00000005587 395.84 3186.06 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
33. RPS11 ENSGALG00000017299 395.84 3186.06 ribosomal protein S11 [Source:NCBI gene;Acc:419049]
34. TMSB4X ENSGALG00000026383 373.43 3005.68 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
35. RPL7A ENSGALG00000003197 370.94 2985.64 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
36. CIRBP ENSGALG00000030918 360.98 2905.47 cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
37. RPL27 ENSGALG00000002837 356.01 2865.47 ribosomal protein L27 [Source:NCBI gene;Acc:396280]
38. ENO1 ENSGALG00000002377 348.54 2805.35 enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
39. RPS20 ENSGALG00000014432 333.60 2685.10 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
40. EEF1B2 ENSGALG00000008590 331.11 2665.05 Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
41. RPS16 ENSGALG00000026490 331.11 2665.05 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
42. RAN ENSGALG00000002569 328.62 2645.01 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
43. RPSA 326.13 2624.97 ribosomal protein SA
44. RPS15A ENSGALG00000006771 323.64 2604.93 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
45. RPS6 ENSGALG00000015082 323.64 2604.93 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
46. RPS24 ENSGALG00000004871 316.17 2544.81 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
47. RPL18A 311.19 2504.72 ribosomal protein L18a
48. RPS23 ENSGALG00000015617 308.70 2484.68 ribosomal protein S23
49. H3-IX H3-IX 301.24 2424.64
50. RPL31 ENSGALG00000016775 298.75 2404.59 ribosomal protein L31 [Source:NCBI gene;Acc:418710]
51. RPL32 ENSGALG00000027142 286.30 2304.39 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
52. RPS4 RPS4 286.30 2304.39
53. RPL23 ENSGALG00000001634 283.81 2284.34 Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
54. RPL6 ENSGALG00000004818 283.81 2284.34 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
55. RPL4 ENSGALG00000007711 273.85 2204.18 ribosomal protein L4 [Source:NCBI gene;Acc:415551]
56. ENSGALG00000028992 ENSGALG00000028992 271.36 2184.14
57. RPS3A ENSGALG00000010077 271.36 2184.14 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
58. SLC25A6_1 ENSGALG00000016691 271.36 2184.14 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
59. RPL14 ENSGALG00000043379 268.87 2164.09 ribosomal protein L14
60. RPS27A ENSGALG00000036790 268.87 2164.09 ribosomal protein S27a [Source:NCBI gene;Acc:395796]
61. CDK1 ENSGALG00000003085 263.89 2124.01 cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
62. MEIS2 ENSGALG00000039118 263.89 2124.01 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
63. RPL23A ENSGALG00000003966 251.44 2023.80 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
64. RPS12 ENSGALG00000013990 243.98 1963.76 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
65. RPLP1 ENSGALG00000030878 236.51 1903.63 ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
66. RPS29 ENSGALG00000012229 236.51 1903.63 ribosomal protein S29 [Source:NCBI gene;Acc:776054]
67. ATP5G3 234.02 1883.59 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
68. CNN3 ENSGALG00000005597 231.53 1863.55 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
69. ATP6V0C ENSGALG00000009229 226.55 1823.47 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
70. CRHOA CRHOA 226.55 1823.47
71. KPNA2 ENSGALG00000003584 226.55 1823.47 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
72. SNRPG ENSGALG00000028409 226.55 1823.47 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
73. RPL10A ENSGALG00000002644 224.06 1803.43 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
74. LDHB ENSGALG00000035836 221.57 1783.38 lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
75. RPL35A ENSGALG00000007611, ENSGALG00000041230 219.08 1763.34 ribosomal protein L35a [Source:NCBI gene;Acc:424924]
76. RPS14 ENSGALG00000004588 219.08 1763.34 ribosomal protein S14 [Source:NCBI gene;Acc:416275]
77. H2AFZ ENSGALG00000014023 216.59 1743.30 H2A histone family, member Z [Source:NCBI gene;Acc:426361]
78. BTF3L4 ENSGALG00000010570 214.10 1723.26 basic transcription factor 3 like 4 [Source:NCBI gene;Acc:424638]
79. RPL38 ENSGALG00000001465 214.10 1723.26 ribosomal protein L38 [Source:NCBI gene;Acc:771528]
80. RPLP2 ENSGALG00000034811 211.61 1703.22 ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
81. RPS15 ENSGALG00000015195 209.12 1683.18 ribosomal protein S15 [Source:NCBI gene;Acc:396448]
82. RPL13 ENSGALG00000006179 206.63 1663.13 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
83. RPL3 ENSGALG00000012172 206.63 1663.13 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
84. ENSGALG00000002696 ENSGALG00000002696 201.65 1623.05
85. HSPE1 ENSGALG00000009070 191.70 1542.96 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
86. RPL36 ENSGALG00000000474 191.70 1542.96 ribosomal protein L36 [Source:NCBI gene;Acc:373936]
87. TCEB3 ENSGALG00000034625 191.70 1542.96 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
88. TPT1 ENSGALG00000028872 184.23 1482.84 tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
89. HMGB1 ENSGALG00000042875 179.25 1442.76 high mobility group box 1 [Source:NCBI gene;Acc:395724]
90. HNRNPDL ENSGALG00000023199 179.25 1442.76 heterogeneous nuclear ribonucleoprotein D like [Source:NCBI gene;Acc:422601]
91. YWHAZ ENSGALG00000031387 171.78 1382.63 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
92. RPL36AL ENSGALG00000004952 169.29 1362.59 ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
93. EEF1D 166.80 1342.55 eukaryotic translation elongation factor 1 delta, transcript variant X13
94. FKBP4 ENSGALG00000014331 161.82 1302.47 FK506 binding protein 4 [Source:NCBI gene;Acc:418261]
95. PRDX1 ENSGALG00000010243 161.82 1302.47 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
96. ANP32B ENSGALG00000037483 159.33 1282.42 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
97. HSPA8 ENSGALG00000006512 156.84 1262.38 heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
98. LUM ENSGALG00000011271 156.84 1262.38 lumican [Source:NCBI gene;Acc:417891]
99. RPS8 ENSGALG00000010124 156.84 1262.38 ribosomal protein S8 [Source:NCBI gene;Acc:424584]
100. CALM CALM 154.35 1242.34
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA