Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_3, section s45.

Sample reads: 124,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 7259.02 58427.21
2. MT-CO3 MT-CO3 5583.86 44943.99
3. EEF1A EEF1A 2791.93 22472.00
4. MT-ND5 MT-ND5 2791.93 22472.00
5. MT-CYB MT-CYB 2512.74 20224.82
6. MT-ND4 MT-ND4 2512.74 20224.82
7. gga-mir-3527 gga-mir-3527 2233.54 17977.56
8. MT-CO1 MT-CO1 1954.35 15730.39
9. MT-ND1 MT-ND1 1395.97 11236.04
10. PTP4A1 ENSGALG00000016271 1395.97 11236.04 protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
11. gga-mir-3533 ENSGALG00000027736 1395.97 11236.04 gga-mir-3533 [Source:miRBase;Acc:MI0015386]
12. HBZ ENSGALG00000023740 1116.77 8988.78 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
13. RAN ENSGALG00000002569 1116.77 8988.78 RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
14. RPL26 RPL26 1116.77 8988.78
15. RPL32 ENSGALG00000027142 1116.77 8988.78 ribosomal protein L32 [Source:NCBI gene;Acc:416122]
16. ACO2 ENSGALG00000011950 837.58 6741.61 aconitase 2 [Source:NCBI gene;Acc:374009]
17. GAPDH ENSGALG00000014442 837.58 6741.61 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
18. H3-IX H3-IX 837.58 6741.61
19. HMGN5 ENSGALG00000007131 837.58 6741.61 high mobility group nucleosome binding domain 5, transcript variant X1
20. MEIS2 ENSGALG00000039118 837.58 6741.61 Meis homeobox 2 [Source:NCBI gene;Acc:395588]
21. MT-ND2 MT-ND2 837.58 6741.61
22. PPIA ENSGALG00000028600 837.58 6741.61 peptidylprolyl isomerase A [Source:NCBI gene;Acc:776282]
23. RPL5 ENSGALG00000005922 837.58 6741.61 ribosomal protein L5 [Source:NCBI gene;Acc:395269]
24. RPL8 ENSGALG00000016232 837.58 6741.61 ribosomal protein L8 [Source:NCBI gene;Acc:418568]
25. ACTG1 ENSGALG00000001381 558.39 4494.43 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
26. ARFGAP3 ENSGALG00000014140 558.39 4494.43 ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
27. ATP5H 558.39 4494.43 ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
28. CAPZA1 ENSGALG00000001547 558.39 4494.43 capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
29. COPS3 ENSGALG00000004834 558.39 4494.43 COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
30. CRHOA CRHOA 558.39 4494.43
31. CRHOB CRHOB 558.39 4494.43
32. DGKZ ENSGALG00000008380 558.39 4494.43 diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
33. EEF1D 558.39 4494.43 eukaryotic translation elongation factor 1 delta, transcript variant X13
34. EIF3F ENSGALG00000005326 558.39 4494.43 eukaryotic translation initiation factor 3 subunit F
35. EIF4G2 ENSGALG00000005587 558.39 4494.43 eukaryotic translation initiation factor 4 gamma 2 [Source:NCBI gene;Acc:395905]
36. GLRX5 ENSGALG00000011079 558.39 4494.43 glutaredoxin 5 [Source:NCBI gene;Acc:423440]
37. GMNN ENSGALG00000013626 558.39 4494.43 geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
38. HBE 558.39 4494.43 hemoglobin subunit epsilon
39. HMGB1 ENSGALG00000042875 558.39 4494.43 high mobility group box 1 [Source:NCBI gene;Acc:395724]
40. KPNA2 ENSGALG00000003584 558.39 4494.43 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
41. MIF ENSGALG00000006326 558.39 4494.43 macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
42. MRPS31 ENSGALG00000017033 558.39 4494.43 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
43. MT-ND3 MT-ND3 558.39 4494.43
44. NOL9 ENSGALG00000028958 558.39 4494.43 nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
45. PEBP1 ENSGALG00000007403 558.39 4494.43 phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
46. POLR3H ENSGALG00000011947 558.39 4494.43 RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
47. RPL10A ENSGALG00000002644 558.39 4494.43 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
48. RPL14 ENSGALG00000043379 558.39 4494.43 ribosomal protein L14
49. RPL18A 558.39 4494.43 ribosomal protein L18a
50. RPL27A ENSGALG00000005948 558.39 4494.43 ribosomal protein L27a [Source:NCBI gene;Acc:770018]
51. RPL29 ENSGALG00000026978 558.39 4494.43 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
52. RPL7A ENSGALG00000003197 558.39 4494.43 ribosomal protein L7a [Source:NCBI gene;Acc:417158]
53. RPS12 ENSGALG00000013990 558.39 4494.43 ribosomal protein S12 [Source:NCBI gene;Acc:421698]
54. RPS20 ENSGALG00000014432 558.39 4494.43 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
55. RRM1 ENSGALG00000017350 558.39 4494.43 ribonucleotide reductase catalytic subunit M1 [Source:NCBI gene;Acc:419081]
56. SEC61G ENSGALG00000037863 558.39 4494.43 Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
57. STMN1 ENSGALG00000001475 558.39 4494.43 stathmin 1 [Source:NCBI gene;Acc:396057]
58. TCTEX1D2 ENSGALG00000027722 558.39 4494.43 Tctex1 domain containing 2
59. TMSB4X ENSGALG00000026383 558.39 4494.43 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
60. UPF3B ENSGALG00000008618 558.39 4494.43 UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
61. WDR91 ENSGALG00000011724 558.39 4494.43 WD repeat domain 91 [Source:NCBI gene;Acc:417939]
62. ABHD17A ENSGALG00000041163 279.19 2247.18 abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
63. ABRACL ENSGALG00000013826 279.19 2247.18 ABRA C-terminal like [Source:NCBI gene;Acc:770205]
64. ACTG1_1 ENSGALG00000001381 279.19 2247.18 Actin, gamma 1 [Source:NCBI gene;Acc:415296]
65. ADH5 ENSGALG00000012245 279.19 2247.18 alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
66. AES ENSGALG00000029503 279.19 2247.18 amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
67. ALDH1A2 ENSGALG00000004270 279.19 2247.18 aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
68. ANGIOPOIETIN-2 ANGIOPOIETIN-2 279.19 2247.18
69. ANXA2 ENSGALG00000003770 279.19 2247.18 annexin A2 [Source:NCBI gene;Acc:396297]
70. APLP2 ENSGALG00000001250 279.19 2247.18 amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:419727]
71. ARF4 ENSGALG00000005622 279.19 2247.18 ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
72. ARGLU1 ENSGALG00000016855 279.19 2247.18 arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
73. ARID4A ENSGALG00000012037 279.19 2247.18 AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
74. ATF4 ENSGALG00000012135 279.19 2247.18 activating transcription factor 4 [Source:NCBI gene;Acc:395693]
75. ATG12 ENSGALG00000002345 279.19 2247.18 autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
76. ATP5C1 279.19 2247.18 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
77. ATP5G3 279.19 2247.18 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
78. ATPAF1 ENSGALG00000010444 279.19 2247.18 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
79. B9D1 ENSGALG00000005096 279.19 2247.18 B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
80. BAZ2B ENSGALG00000012579 279.19 2247.18 bromodomain adjacent to zinc finger domain 2B [Source:NCBI gene;Acc:395400]
81. BDH1_1 ENSGALG00000023601 279.19 2247.18 3-hydroxybutyrate dehydrogenase, type 1
82. BMP5 ENSGALG00000016293 279.19 2247.18 bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
83. BRMS1L ENSGALG00000010093 279.19 2247.18 BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
84. C12ORF57 C12ORF57 279.19 2247.18
85. C1orf174 ENSGALG00000000975 279.19 2247.18 chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
86. C26H6ORF106 C26H6ORF106 279.19 2247.18
87. CAT ENSGALG00000030187 279.19 2247.18 catalase [Source:NCBI gene;Acc:423600]
88. CCDC167 ENSGALG00000010151 279.19 2247.18 coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
89. CCDC59 ENSGALG00000028648 279.19 2247.18 coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
90. CCT4 ENSGALG00000008812 279.19 2247.18 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
91. CCT6 CCT6 279.19 2247.18
92. CDK8 ENSGALG00000017104 279.19 2247.18 cyclin dependent kinase 8, transcript variant X4
93. CENPF ENSGALG00000009690 279.19 2247.18 centromere protein F [Source:NCBI gene;Acc:395357]
94. CEP192 ENSGALG00000035625 279.19 2247.18 centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
95. CHPKCI CHPKCI 279.19 2247.18
96. CLIP1 ENSGALG00000004467 279.19 2247.18 CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
97. CLTA ENSGALG00000015326 279.19 2247.18 clathrin light chain A [Source:NCBI gene;Acc:427284]
98. CNDP2 ENSGALG00000019514 279.19 2247.18 carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
99. CNN3 ENSGALG00000005597 279.19 2247.18 Gallus gallus calponin 3 (CNN3), mRNA. [Source:RefSeq mRNA;Acc:NM_001354671]
100. CNOT6 ENSGALG00000034316 279.19 2247.18 CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA