Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Chicken_E3_posterior_slice_2, section s13.

Sample reads: 124,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. MT-ATP6 MT-ATP6 5916.23 47618.97
2. RPS6 ENSGALG00000015082 5916.23 47618.97 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
3. ATP6V1E1 ENSGALG00000013036 2958.12 23809.53 ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
4. DDX5 ENSGALG00000003532 2958.12 23809.53 DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
5. DOCK1 ENSGALG00000042259 2958.12 23809.53 dedicator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:2987]
6. EIF4A3 ENSGALG00000008530 2958.12 23809.53 eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:416704]
7. ENSGALG00000012451 ENSGALG00000012451 2958.12 23809.53
8. GAPDH ENSGALG00000014442 2958.12 23809.53 glyceraldehyde-3-phosphate dehydrogenase [Source:NCBI gene;Acc:374193]
9. GNG5 ENSGALG00000027561 2958.12 23809.53 G protein subunit gamma 5 [Source:NCBI gene;Acc:424538]
10. HES6 ENSGALG00000028415 2958.12 23809.53 hes family bHLH transcription factor 6
11. HMGN2 HMGN2 2958.12 23809.53
12. HUNK ENSGALG00000015879 2958.12 23809.53 hormonally up-regulated Neu-associated kinase [Source:HGNC Symbol;Acc:HGNC:13326]
13. IMMT ENSGALG00000015783 2958.12 23809.53 inner membrane mitochondrial protein [Source:NCBI gene;Acc:422912]
14. ITGB5 ENSGALG00000029766 2958.12 23809.53 integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
15. KPNA2 ENSGALG00000003584 2958.12 23809.53 karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
16. LOC107057078 ENSGALG00000004725 2958.12 23809.53 acyl-CoA dehydrogenase family member 10-like, transcript variant X7
17. MRPL3 ENSGALG00000040873 2958.12 23809.53 mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
18. MT-CO3 MT-CO3 2958.12 23809.53
19. MT-CYB MT-CYB 2958.12 23809.53
20. MT-ND2 MT-ND2 2958.12 23809.53
21. MT-ND3 MT-ND3 2958.12 23809.53
22. MT-ND4 MT-ND4 2958.12 23809.53
23. MT-ND5 MT-ND5 2958.12 23809.53
24. NAT10 ENSGALG00000014573 2958.12 23809.53 N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
25. NDUFA2 ENSGALG00000040626 2958.12 23809.53 NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
26. NME2 ENSGALG00000002932 2958.12 23809.53 NME/NM23 nucleoside diphosphate kinase 2 [Source:NCBI gene;Acc:395916]
27. NUP43 ENSGALG00000012387 2958.12 23809.53 nucleoporin 43 [Source:HGNC Symbol;Acc:HGNC:21182]
28. PPP6R3 ENSGALG00000007037 2958.12 23809.53 protein phosphatase 6 regulatory subunit 3 [Source:NCBI gene;Acc:423116]
29. RPL13 ENSGALG00000006179 2958.12 23809.53 ribosomal protein L13 [Source:NCBI gene;Acc:395849]
30. RPL15 ENSGALG00000011290 2958.12 23809.53 ribosomal protein L15 [Source:NCBI gene;Acc:428442]
31. RPL26 RPL26 2958.12 23809.53
32. RPL6 ENSGALG00000004818 2958.12 23809.53 ribosomal protein L6 [Source:NCBI gene;Acc:373957]
33. RPS13 ENSGALG00000006096 2958.12 23809.53 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
34. RPS7 ENSGALG00000016392 2958.12 23809.53 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
35. SKP1 ENSGALG00000006474 2958.12 23809.53 S-phase kinase-associated protein 1 [Source:NCBI gene;Acc:416319]
36. SLC25A6 ENSGALG00000016691 2958.12 23809.53 solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
37. SNRPG ENSGALG00000028409 2958.12 23809.53 small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
38. SNTB1 ENSGALG00000034528 2958.12 23809.53 syntrophin beta 1 [Source:NCBI gene;Acc:404774]
39. TMSB4X ENSGALG00000026383 2958.12 23809.53 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
40. gga-mir-3527 gga-mir-3527 2958.12 23809.53
41. 5 5 0.00 0.00
42. 5-MCDG 5-MCDG 0.00 0.00
43. 5S 5S 0.00 0.00
44. 5S_1 5S_1 0.00 0.00
45. 5S_2 5S_2 0.00 0.00
46. 7SK 7SK 0.00 0.00
47. 7SK_1 7SK_1 0.00 0.00
48. 7SK_2 7SK_2 0.00 0.00
49. A1CF ENSGALG00000003765 0.00 0.00 APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
50. A2ML2 ENSGALG00000014252 0.00 0.00 alpha-2-macroglobulin-like 2, transcript variant X6
51. A4GNT ENSGALG00000006600 0.00 0.00 alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
52. AACS ENSGALG00000002899 0.00 0.00 acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
53. AADAC ENSGALG00000010364 0.00 0.00 arylacetamide deacetylase [Source:HGNC Symbol;Acc:HGNC:17]
54. AADAT ENSGALG00000009655 0.00 0.00 aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
55. AAED1 0.00 0.00 AhpC/TSA antioxidant enzyme domain containing 1
56. AAGAB ENSGALG00000007887 0.00 0.00 alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
57. AAK1 ENSGALG00000041911 0.00 0.00 AP2 associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:19679]
58. AAMP ENSGALG00000011445 0.00 0.00 angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
59. AANAT ENSGALG00000001955 0.00 0.00 aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
60. AARS ENSGALG00000001965 0.00 0.00 alanyl-tRNA synthetase [Source:NCBI gene;Acc:415668]
61. AARS2 ENSGALG00000035337 0.00 0.00 alanyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421436]
62. AARSD1 ENSGALG00000002880 0.00 0.00 Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
63. AASDH ENSGALG00000013764 0.00 0.00 aminoadipate-semialdehyde dehydrogenase [Source:HGNC Symbol;Acc:HGNC:23993]
64. AASDHPPT ENSGALG00000027981 0.00 0.00 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
65. AASS ENSGALG00000008953 0.00 0.00 aminoadipate-semialdehyde synthase [Source:HGNC Symbol;Acc:HGNC:17366]
66. AATF ENSGALG00000005420 0.00 0.00 apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
67. AATK ENSGALG00000006901 0.00 0.00 apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
68. ABAT ENSGALG00000007334 0.00 0.00 4-aminobutyrate aminotransferase [Source:HGNC Symbol;Acc:HGNC:23]
69. ABCA1 ENSGALG00000015433 0.00 0.00 ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
70. ABCA12 ENSGALG00000003553 0.00 0.00 ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
71. ABCA2 ENSGALG00000036894 0.00 0.00 ATP binding cassette subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:32]
72. ABCA3 ENSGALG00000037837 0.00 0.00 ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
73. ABCA4 ENSGALG00000005752 0.00 0.00 ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
74. ABCA5 ENSGALG00000004333 0.00 0.00 ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
75. ABCA7 ENSGALG00000002453 0.00 0.00 ATP-binding cassette, sub-family A (ABC1), member 7, transcript variant X5
76. ABCA8 ENSGALG00000021399 0.00 0.00 ATP binding cassette subfamily A member 8
77. ABCA9 ENSGALG00000021395 0.00 0.00 ATP binding cassette subfamily A member 9
78. ABCB10 ENSGALG00000011096 0.00 0.00 ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
79. ABCB11 ENSGALG00000010891 0.00 0.00 ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
80. ABCB1LB ABCB1LB 0.00 0.00
81. ABCB5 ENSGALG00000010901 0.00 0.00 ATP binding cassette subfamily B member 5, transcript variant X1
82. ABCB6 ENSGALG00000029672 0.00 0.00 ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
83. ABCB7 ENSGALG00000007788 0.00 0.00 ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
84. ABCC1 ENSGALG00000006646 0.00 0.00 ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
85. ABCC10 0.00 0.00 ATP binding cassette subfamily C member 10, transcript variant X10
86. ABCC13 ENSGALG00000015675 0.00 0.00 ATP binding cassette subfamily C member 13 (pseudogene), transcript variant X1
87. ABCC2 ENSGALG00000007395 0.00 0.00 ATP binding cassette subfamily C member 2, transcript variant X2
88. ABCC3 ENSGALG00000007522 0.00 0.00 ATP binding cassette subfamily C member 3, transcript variant X5
89. ABCC4 ENSGALG00000016896 0.00 0.00 ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
90. ABCC5 ENSGALG00000008369 0.00 0.00 ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]
91. ABCC6 ENSGALG00000038152 0.00 0.00 ATP binding cassette subfamily C member 6 [Source:NCBI gene;Acc:416600]
92. ABCC8 ENSGALG00000006172 0.00 0.00 ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
93. ABCC9 ENSGALG00000013244 0.00 0.00 ATP binding cassette subfamily C member 9 [Source:HGNC Symbol;Acc:HGNC:60]
94. ABCD2 ENSGALG00000042554 0.00 0.00 ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
95. ABCD3 ENSGALG00000005647 0.00 0.00 ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
96. ABCD4 ENSGALG00000010229 0.00 0.00 ATP binding cassette subfamily D member 4 [Source:HGNC Symbol;Acc:HGNC:68]
97. ABCE1 ENSGALG00000009961 0.00 0.00 ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
98. ABCF2 ENSGALG00000034573 0.00 0.00 ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
99. ABCF3 ENSGALG00000008480 0.00 0.00 ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72]
100. ABCG1 ENSGALG00000016164 0.00 0.00 ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA