Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ABCC13

Gene Name Gene ID Reads Annotation
ABCC13 ENSGALG00000015675 66 ATP binding cassette subfamily C member 13 (pseudogene), transcript variant X1











Genes with expression patterns similar to ABCC13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ABCC13 ENSGALG00000015675 66 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ATP binding cassette subfamily C member 13 (pseudogene), transcript variant X1
2. SCN4B ENSGALG00000007409 22 0.958 - - 0.958 - - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
3. UIMC1 ENSGALG00000001158 22 0.952 - - 0.952 - - - - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
4. ZP2 ENSGALG00000002428 10 0.947 - - 0.947 - - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
5. GATA4 ENSGALG00000016662 6 0.945 - - 0.945 - - - - - - - GATA binding protein 4 [Source:NCBI gene;Acc:396392]
6. VEPH1 ENSGALG00000009682 51 0.945 - - 0.945 - - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
7. DENND6B ENSGALG00000043771 22 0.945 - - 0.945 - - - - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
8. PLA1A ENSGALG00000014997 152 0.937 - - 0.937 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
9. TRAF3IP3 ENSGALG00000001373 11 0.937 - - 0.937 - - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
10. TPTE2 ENSGALG00000017031 29 0.935 - - 0.935 - - - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
11. CAPN6 ENSGALG00000008006 16 0.935 - - 0.935 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
12. C1orf168 C1orf168 98 0.928 - - 0.928 - - - - - - -
13. FUK ENSGALG00000002648 9 0.926 - - 0.926 - - - - - - - fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
14. PLEKHA1 ENSGALG00000034548 34 0.925 - - 0.925 - - - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
15. ICMT ENSGALG00000024053 10 0.925 - - 0.925 - - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
16. KNDC1 ENSGALG00000007007 31 0.919 - - 0.919 - - - - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
17. CACNA1D ENSGALG00000005332 34 0.918 - - 0.918 - - - - - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
18. STX19 ENSGALG00000015413 28 0.917 - - 0.917 - - - - - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
19. CRK ENSGALG00000002656 15 0.916 - - 0.916 - - - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
20. LSM14B ENSGALG00000005125 31 0.915 - - 0.915 - - - - - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
21. TEX11 ENSGALG00000005775 58 0.912 - - 0.912 - - - - - - - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
22. WNK1 ENSGALG00000012992 67 0.908 - - 0.908 - - - - - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
23. MVK ENSGALG00000013848 239 0.905 - - 0.905 - - - - - - - mevalonate kinase [Source:HGNC Symbol;Acc:HGNC:7530]
24. LRIG1 ENSGALG00000007483 19 0.903 - - 0.903 - - - - - - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
25. CDCP1 ENSGALG00000040447 47 0.903 - - 0.903 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
26. HDAC3 ENSGALG00000002634 130 0.9 - - 0.900 - - - - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
27. KIAA1841 ENSGALG00000007825 22 0.899 - - 0.899 - - - - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
28. CENPQ ENSGALG00000016692 293 0.898 - - 0.898 - - - - - - - centromere protein Q [Source:NCBI gene;Acc:422048]
29. DLEC1 ENSGALG00000005826 23 0.897 - - 0.897 - - - - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
30. ENSGALG00000021386 ENSGALG00000021386 29 0.897 - - 0.897 - - - - - - -
31. FGF22 ENSGALG00000041822 37 0.895 - - 0.895 - - - - - - - fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
32. ATP8B1 ENSGALG00000030834 521 0.895 - - 0.895 - - - - - - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
33. HSD3B2 HSD3B2 55 0.894 - - 0.894 - - - - - - -
34. FAM26E 37 0.892 - - 0.892 - - - - - - - family with sequence similarity 26 member E
35. N4BP2L1 ENSGALG00000017072 1371 0.888 - - 0.888 - - - - - - - NEDD4 binding protein 2 like 1, transcript variant X2
36. FADD ENSGALG00000007625 142 0.887 - - 0.887 - - - - - - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
37. SP2 ENSGALG00000000233 43 0.879 - - 0.879 - - - - - - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
38. LPHN3 LPHN3 41 0.871 - - - - - - 0.871 - - -
39. SLITRK4 ENSGALG00000007242 165 0.871 - - 0.871 - - - - - - - SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
40. VWA2 ENSGALG00000008980 52 0.87 - - 0.870 - - - - - - - von Willebrand factor A domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24709]
41. C10H15ORF58 ENSGALG00000020921 81 0.869 - - 0.869 - - - - - - - chromosome 10 open reading frame, human C15orf58, transcript variant X7
42. ELMOD2 ENSGALG00000009836 177 0.862 - - 0.862 - - - - - - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
43. KCTD17 ENSGALG00000042419 90 0.862 - - 0.862 - - - - - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
44. CD34 ENSGALG00000001177 48 0.861 - - 0.861 - - - - - - - CD34 molecule, transcript variant X3
45. GPR157 ENSGALG00000002473 231 0.859 - - 0.859 - - - - - - - G protein-coupled receptor 157 [Source:HGNC Symbol;Acc:HGNC:23687]
46. ENSGALG00000017589 ENSGALG00000017589 36 0.858 - - 0.858 - - - - - - -
47. GRID1 ENSGALG00000037366 159 0.858 - - 0.858 - - - - - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
48. LMCD1 ENSGALG00000008349 928 0.857 - - 0.857 - - - - - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
49. CR1L ENSGALG00000023950 98 0.857 - - 0.857 - - - - - - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
50. VEGFA ENSGALG00000010290 502 0.856 - - - - - - 0.856 - - - vascular endothelial growth factor A [Source:NCBI gene;Acc:395909]
51. ENSGALG00000013327 ENSGALG00000013327 16 0.855 - - 0.855 - - - - - - -
52. BMPR1A ENSGALG00000002003 20 0.853 - - 0.853 - - - - - - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
53. LOC100857512 ENSGALG00000026070 561 0.849 - - 0.849 - - - - - - - death-associated protein kinase 2-like, transcript variant X2
54. TMEM27 ENSGALG00000029168 36 0.848 - - 0.848 - - - - - - - transmembrane protein 27, transcript variant X3
55. MMRN1 ENSGALG00000010391 997 0.847 - - 0.847 - - - - - - - multimerin 1 [Source:HGNC Symbol;Acc:HGNC:7178]
56. STXBP5L ENSGALG00000032361 41 0.847 - - 0.847 - - - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
57. HS3ST5 ENSGALG00000026594 44 0.846 - - 0.846 - - - - - - - heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
58. STARD10 ENSGALG00000002577 245 0.845 - - 0.845 - - - - - - - StAR related lipid transfer domain containing 10
59. TASP1 ENSGALG00000009057 1295 0.844 - - 0.844 - - - - - - - taspase 1 [Source:NCBI gene;Acc:416741]
60. CPEB1 ENSGALG00000002150 335 0.843 - - 0.843 - - - - - - - cytoplasmic polyadenylation element binding protein 1 [Source:NCBI gene;Acc:415326]
61. PTPN13 ENSGALG00000011078 62 0.834 - - 0.834 - - - - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
62. HBB HBB 7552 0.833 - - 0.833 - - - - - - -
63. ZCCHC4 ENSGALG00000036621 625 0.827 - - 0.827 - - - - - - - zinc finger CCHC-type containing 4 [Source:HGNC Symbol;Acc:HGNC:22917]
64. FAM219A ENSGALG00000005821 52 0.823 - - 0.823 - - - - - - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
65. PAK3 ENSGALG00000008058 234 0.821 - - 0.821 - - - - - - - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
66. CRAT ENSGALG00000037443 78 0.82 - - 0.820 - - - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
67. P4HTM ENSGALG00000006937 33 0.817 - - 0.817 - - - - - - - prolyl 4-hydroxylase, transmembrane [Source:HGNC Symbol;Acc:HGNC:28858]
68. LONRF3 ENSGALG00000008860 55 0.816 - - 0.816 - - - - - - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
69. UBAC1 ENSGALG00000042564 598 0.815 - - 0.815 - - - - - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
70. GALNT5 1027 0.814 - - 0.814 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 5, transcript variant X1
71. ZNF407 ENSGALG00000036128, ENSGALG00000041358 138 0.813 - - - - - - - 0.813 - - zinc finger protein 407 [Source:HGNC Symbol;Acc:HGNC:19904]
72. RNF25 ENSGALG00000011375 51 0.81 - - 0.810 - - - - - - - ring finger protein 25 [Source:NCBI gene;Acc:424211]
73. FAM107B ENSGALG00000033226 1539 0.809 - - 0.809 - - - - - - - family with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]
74. SYNC ENSGALG00000003529 389 0.805 - - 0.805 - - - - - - - syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
75. KDM3A ENSGALG00000015803 2729 0.801 - - 0.801 - - - - - - - lysine demethylase 3A [Source:NCBI gene;Acc:422917]
76. ECM2 ENSGALG00000004695 375 0.798 - - 0.798 - - - - - - - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
77. C20ORF7 C20ORF7 2383 0.797 - - 0.797 - - - - - - -
78. ZBTB25 ENSGALG00000028942 21 0.797 - - 0.797 - - - - - - - zinc finger and BTB domain containing 25 [Source:HGNC Symbol;Acc:HGNC:13112]
79. B4GALT2 ENSGALG00000010094 36 0.796 - - 0.796 - - - - - - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
80. ENSGALG00000009344 ENSGALG00000009344 330 0.795 - - 0.795 - - - - - - -
81. MORC2 2505 0.795 - - 0.795 - - - - - - - MORC family CW-type zinc finger 2, transcript variant X2
82. EVA1CL ENSGALG00000004734 168 0.794 - - 0.794 - - - - - - - protein eva-1 homolog C-like, transcript variant X2
83. WIF1 ENSGALG00000039209 863 0.794 - - 0.794 - - - - - - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
84. NAPG ENSGALG00000013932 67 0.793 - - 0.793 - - - - - - - NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
85. CLGN ENSGALG00000009826 54 0.793 - - 0.793 - - - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
86. PARVA ENSGALG00000005438 91 0.792 - - 0.792 - - - - - - - parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
87. KHDRBS3 ENSGALG00000031519 501 0.791 - - 0.791 - - - - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
88. PURA ENSGALG00000029387 265 0.789 - - 0.789 - - - - - - - purine rich element binding protein A [Source:HGNC Symbol;Acc:HGNC:9701]
89. VWC2 ENSGALG00000013081 492 0.788 - - 0.788 - - - - - - - von Willebrand factor C domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30200]
90. LOXL2 ENSGALG00000000402 177 0.786 - - 0.786 - - - - - - - lysyl oxidase like 2 [Source:NCBI gene;Acc:419533]
91. 7SK 7SK 631 0.785 - - 0.785 - - - - - - -
92. ADAMTS12 55 0.781 - - - - - - 0.781 - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
93. TCTEX1D1 54 0.778 - - 0.778 - - - - - - - Tctex1 domain containing 1, transcript variant X2
94. GOLM1 ENSGALG00000012601 143 0.777 - - 0.777 - - - - - - - golgi membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:15451]
95. ANKS1B ENSGALG00000011549 440 0.775 - - 0.775 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
96. PRKCE ENSGALG00000010000 99 0.774 - - - - - - - - - 0.774 protein kinase C epsilon, transcript variant X1
97. TAP1 ENSGALG00000035075 54 0.77 - - 0.770 - - - - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
98. HJURP ENSGALG00000015363 54 0.768 - - 0.768 - - - - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
99. KCNMA1 ENSGALG00000004980 261 0.767 - - 0.767 - - - - - - - potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
100. MRAS ENSGALG00000011592 1264 0.76 - - - - - - 0.760 - - - muscle RAS oncogene homolog [Source:NCBI gene;Acc:395149]

There are 63 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA