Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rims1a

Gene Name Gene ID Reads Annotation
rims1a ENSDARG00000074680 143 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]










Genes with expression patterns similar to rims1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rims1a ENSDARG00000074680 143 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
2. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.954 - 1.000 - - - 0.954 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
3. BX470131.1 BX470131.1 86 1.934 - 1.000 - - - 0.934 - - -
4. st6gal1 ENSDARG00000044514 142 1.933 - 1.000 - - - 0.933 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
5. tmem178 ENSDARG00000020758 77 1.931 - 1.000 - - - 0.931 - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
6. si:dkey-100n10.2 101 1.929 - 1.000 - - - 0.929 - - - si:dkey-100n10.2
7. si:dkey-225k4.1 ENSDARG00000092045 47 1.911 0.911 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
8. entpd2b ENSDARG00000044795 7 1.9 - 1.000 - - - 0.900 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
9. TMEM57 TMEM57 260 1.894 - 1.000 - - - 0.894 - - -
10. olfm1a ENSDARG00000018270 107 1.88 - 1.000 - - - 0.880 - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
11. si:dkey-81p22.11 ENSDARG00000093797 68 1.879 - 1.000 - - - 0.879 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
12. pycr1 pycr1 1258 1.866 - 1.000 - - - 0.866 - - -
13. hsp70l_1 ENSDARG00000055723 72 1.859 - 1.000 - - - 0.859 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
14. GRIN2B GRIN2B 140 1.854 - 1.000 - - - 0.854 - - -
15. CABZ01079192.1 ENSDARG00000101629 23 1.849 - 1.000 - - - 0.849 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
16. scg2b ENSDARG00000038574 345 1.843 - 1.000 - - - 0.843 - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
17. cyp27a7 ENSDARG00000033802 216 1.808 - 1.000 - - - 0.808 - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
18. HELZ2_1 ENSDARG00000012600 53 1.807 - 1.000 - - - 0.807 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
19. lhx5 ENSDARG00000057936 785 1.786 - 1.000 - - - 0.786 - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
20. ROBO3_1 ROBO3_1 468 1.781 - 0.893 - - - 0.888 - - -
21. SNX19 SNX19 350 1.78 - - - - - 0.923 0.857 - -
22. LINGO2 LINGO2 300 1.779 - 0.880 - - - 0.899 - - -
23. fez1 ENSDARG00000023174 701 1.752 - 1.000 - - - 0.752 - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
24. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.74 - 0.826 - - - 0.914 - - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
25. BX321870.1 ENSDARG00000098519 9 1.726 - 1.000 - - 0.726 - - - -
26. toporsa ENSDARG00000037260 149 1.717 0.878 - - - - 0.839 - - - topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
27. aatkb ENSDARG00000104442 392 1.711 - 1.000 - - - 0.711 - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
28. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.676 - 0.852 - - - 0.824 - - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
29. CT955963.1 ENSDARG00000100370 23 1.671 - 0.794 - - - 0.877 - - -
30. CR339053.3 CR339053.3 244 1.669 0.904 - - - - 0.765 - - -
31. vhl ENSDARG00000070617 663 1.668 0.804 - - - - 0.864 - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
32. dcdc2b ENSDARG00000053744 181 1.662 - - - - - 0.823 0.839 - - doublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
33. RNF39 RNF39 52 1.651 0.911 - - - 0.740 - - - -
34. ripk2 ENSDARG00000104290 71 1.628 - - - - - 0.820 0.808 - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
35. CABZ01112521.1 CABZ01112521.1 83 1.627 0.762 0.865 - - - - - - -
36. mir34 176 1.623 0.850 - - - - 0.773 - - - microRNA 34
37. BX936443.2 BX936443.2 28 1.619 0.744 0.875 - - - - - - -
38. shisa7 shisa7 181 1.604 - 0.756 - - - 0.848 - - -
39. RAC1_2 RAC1_2 51 1.571 - - - - 0.731 0.840 - - -
40. CR759921.2 CR759921.2 583 1.55 - - - - - 0.717 0.833 - -
41. phf23b ENSDARG00000036305 1073 1.535 - 0.780 - - - 0.755 - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
42. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.526 - 0.728 - - - 0.798 - - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
43. sfr1 ENSDARG00000021974 45 1.523 - - - - 0.775 - 0.748 - - SWI5-dependent homologous recombination repair protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-27]
44. relnl relnl 863 1.522 - 0.805 - - - 0.717 - - -
45. cacng8b ENSDARG00000070626 176 1.519 - 0.794 - - - 0.725 - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
46. apof ENSDARG00000090980 145 1.514 - - - - 0.720 0.794 - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
47. PLEKHM3 ENSDARG00000030633 496 1.514 - - - - - 0.808 0.706 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
48. irx5b ENSDARG00000074070 459 1.485 - 0.726 - - - 0.759 - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
49. lrrc3b ENSDARG00000063215 0 1 - 1.000 - - - - - - - leucine rich repeat containing 3B [Source:ZFIN;Acc:ZDB-GENE-070410-55]
50. si:ch211-197e7.1 ENSDARG00000095200 1 1 - 1.000 - - - - - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
51. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - 1.000 - - - - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
52. lama3 ENSDARG00000071462 1 1 - 1.000 - - - - - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
53. si:ch211-214j24.15 ENSDARG00000063481 8 1 - 1.000 - - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
54. tbc1d20 ENSDARG00000032298 1 1 - 1.000 - - - - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
55. il12bb ENSDARG00000054542 6 1 - 1.000 - - - - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
56. CMA1_3 CMA1_3 0 1 - 1.000 - - - - - - -
57. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - 1.000 - - - - - - -
58. pcyt1ba ENSDARG00000058162 206 1 - 1.000 - - - - - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
59. zgc:173593 ENSDARG00000077360 10 1 - 1.000 - - - - - - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
60. LRFN4_1 LRFN4_1 5 1 - 1.000 - - - - - - -
61. si:ch211-108c6.2 14 1 - 1.000 - - - - - - - si:ch211-108c6.2
62. si:dkeyp-82h4.1 ENSDARG00000096463 18 1 - 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
63. lsm10 5 1 - 1.000 - - - - - - - LSM10, U7 small nuclear RNA associated
64. lrrc18b ENSDARG00000076236 5 1 - 1.000 - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
65. adam10b ENSDARG00000015502 26 1 - 1.000 - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
66. arhgef9a ENSDARG00000061746 58 1 - 1.000 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
67. phf21aa ENSDARG00000006878 31 1 - 1.000 - - - - - - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
68. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - 1.000 - - - - - - -
69. cacng2a ENSDARG00000032565 99 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
70. CABZ01057951.1 CABZ01057951.1 10 1 - 1.000 - - - - - - -
71. MFAP4_3 MFAP4_3 7 1 - 1.000 - - - - - - -
72. U1_4 U1_4 0 1 - 1.000 - - - - - - -
73. FAIM2 FAIM2 43 1 - 1.000 - - - - - - -
74. kif20a ENSDARG00000044491 12 1 - 1.000 - - - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
75. nid2b ENSDARG00000009471 4 1 - 1.000 - - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
76. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - 1.000 - - - - - - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
77. bmp1b ENSDARG00000028053 25 1 - 1.000 - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
78. zgc:174224_1 ENSDARG00000093875 7 1 - 1.000 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
79. plscr3a ENSDARG00000093078 7 1 - 1.000 - - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
80. col8a1b ENSDARG00000003533 18 1 - 1.000 - - - - - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
81. ABHD12B_1 ABHD12B_1 57 1 - 1.000 - - - - - - -
82. fermt3a fermt3a 56 1 - 1.000 - - - - - - -
83. si:dkey-20d21.12 ENSDARG00000092123 38 1 - 1.000 - - - - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
84. ifnphi1 ENSDARG00000025607 6 1 - 1.000 - - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
85. si:dkey-165b20.3 ENSDARG00000099544 6 1 - 1.000 - - - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
86. GLS2 GLS2 10 1 - 1.000 - - - - - - -
87. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
88. ALOX5_2 ALOX5_2 6 1 - 1.000 - - - - - - -
89. neu3.5 ENSDARG00000096368 5 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
90. si:dkey-19a16.2 ENSDARG00000058794 8 1 - 1.000 - - - - - - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
91. si:dkey-241f21.7 si:dkey-241f21.7 3 1 - 1.000 - - - - - - -
92. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
93. sowahca ENSDARG00000098790 1 1 - 1.000 - - - - - - - sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
94. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - 1.000 - - - - - - -
95. FP236851.1 FP236851.1 10 1 - 1.000 - - - - - - -
96. cybb ENSDARG00000056615 177 1 - 1.000 - - - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
97. SNORD59 SNORD59 7 1 - 1.000 - - - - - - -
98. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
99. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - 1.000 - - - - - - -
100. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]

There are 1835 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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