Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for scg2b

Gene Name Gene ID Reads Annotation
scg2b ENSDARG00000038574 345 secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]










Genes with expression patterns similar to scg2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. scg2b ENSDARG00000038574 345 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
2. st6gal1 ENSDARG00000044514 142 3.57 0.860 1.000 - - - 0.900 0.810 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
3. fez1 ENSDARG00000023174 701 3.492 0.822 1.000 - - - 0.854 0.816 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
4. lhx5 ENSDARG00000057936 785 3.491 - 1.000 - - 0.709 0.965 0.817 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
5. eno2 ENSDARG00000014287 2162 3.393 0.846 - - - 0.753 0.931 0.863 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
6. nrxn2a ENSDARG00000061454 291 3.286 0.770 - - - - 0.783 0.774 0.959 - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
7. ppp3ca ENSDARG00000004988 615 3.268 0.722 - - - - 0.969 0.822 0.755 - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
8. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 3.16 0.752 0.728 - - - 0.941 0.739 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
9. pcsk1nl ENSDARG00000076170 1232 2.749 0.917 - - - - 0.985 0.847 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
10. ROBO3_1 ROBO3_1 468 2.745 - 0.893 - - - 0.972 0.880 - -
11. nova1 ENSDARG00000020178 4129 2.744 - - - - - 0.964 0.870 0.910 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
12. BX957337.1 BX957337.1 1685 2.721 0.895 - - - - 0.967 0.859 - -
13. syt11a ENSDARG00000057913 1145 2.682 0.850 - - - - 0.983 0.849 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
14. sncgb ENSDARG00000109715 1014 2.677 0.875 - - - - 0.956 0.846 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
15. myt1b ENSDARG00000102879 5411 2.669 0.880 - - - - 0.916 0.873 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
16. notch1b ENSDARG00000052094 7874 2.665 - - - - - 0.917 0.866 0.882 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
17. si:dkey-100n10.2 101 2.659 0.768 1.000 - - - 0.891 - - - si:dkey-100n10.2
18. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.656 - - - - - 0.818 0.899 0.939 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
19. glra1 ENSDARG00000012019 315 2.649 - - - - 0.878 0.935 0.836 - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
20. dpysl5a ENSDARG00000011141 1827 2.648 - - - - - 0.985 0.877 0.786 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
21. syt9a ENSDARG00000003994 298 2.642 - - - - - 0.925 0.757 0.960 - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
22. si:ch73-21g5.7 ENSDARG00000093156 9412 2.639 0.806 - - - - 0.943 0.890 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
23. scn8aa ENSDARG00000005775 792 2.636 0.842 - - - - 0.923 0.871 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
24. BX470131.1 BX470131.1 86 2.631 - 1.000 - - - 0.752 0.879 - -
25. cldn5a ENSDARG00000043716 3865 2.627 - - - - - 0.845 0.829 0.953 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
26. stx1b ENSDARG00000000503 2724 2.622 0.868 - - - - 0.876 0.878 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
27. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.619 0.768 - - - - 0.970 0.881 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
28. stap2a ENSDARG00000092810 591 2.612 - - - - - 0.888 0.766 0.958 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
29. slc1a2b ENSDARG00000102453 3136 2.612 0.814 - - - - 0.929 0.869 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
30. MAP1A MAP1A 847 2.612 0.820 - - - - 0.948 0.844 - -
31. zic1 ENSDARG00000015567 2520 2.607 - - - - - 0.933 0.797 0.877 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
32. ttll7 ENSDARG00000062973 519 2.607 0.726 - - - - 0.975 - 0.906 - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
33. spock2 ENSDARG00000075393 791 2.607 0.761 - - - - 0.978 0.868 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
34. pcdh1gc5 ENSDARG00000104826 10052 2.605 0.765 - - - - 0.971 0.869 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
35. CACFD1 ENSDARG00000090818 1298 2.6 - - - - - 0.909 0.802 0.889 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
36. stmn2a ENSDARG00000033234 2272 2.594 0.757 - - - - 0.976 0.861 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
37. stmn2b ENSDARG00000070537 1586 2.594 0.829 - - - - 0.964 0.801 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
38. ptprna ENSDARG00000058646 1327 2.59 - - - - - 0.798 0.874 0.918 - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
39. C7H4orf48 C7H4orf48 1455 2.588 0.822 - - - - 0.957 0.809 - -
40. TUBB8P7_1 TUBB8P7_1 2722 2.588 0.835 - - - - 0.923 0.830 - -
41. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.588 0.821 - - - - 0.947 0.820 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
42. nadl1.1 1200 2.587 0.849 - - - - 0.890 0.848 - - neural adhesion molecule L1.1, transcript variant X1
43. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.586 0.858 - - - - 0.876 0.852 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
44. tuba1c ENSDARG00000055216 8384 2.576 0.742 - - - - 0.948 0.886 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
45. syn2a ENSDARG00000045945 434 2.576 0.875 - - - - 0.888 0.813 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
46. ndrg4 ENSDARG00000103937 1234 2.572 0.789 - - - - 0.954 0.829 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
47. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.568 0.816 - - - - 0.904 0.848 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
48. mllt11 ENSDARG00000071026 2518 2.568 0.797 - - - - 0.947 0.824 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
49. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 2.568 0.774 1.000 - - - 0.794 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
50. CLIP3 ENSDARG00000054456 734 2.567 0.873 - - - - 0.857 0.837 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
51. rusc1 ENSDARG00000078125 617 2.564 0.849 - - - - 0.852 0.863 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
52. TMEM57 TMEM57 260 2.563 - 1.000 - - - 0.753 0.810 - -
53. nrn1a ENSDARG00000071860 1311 2.563 0.731 - - - - 0.972 0.860 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
54. rtn1b ENSDARG00000021143 1682 2.557 0.806 - - - - 0.952 0.799 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
55. scn2b ENSDARG00000101713 796 2.556 0.835 - - - - - 0.853 0.868 - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
56. vgf ENSDARG00000105529 247 2.555 0.774 - - - - 0.908 0.873 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
57. LINGO2 LINGO2 300 2.553 - 0.880 - - - 0.869 0.804 - -
58. snap25b ENSDARG00000058117 469 2.552 0.768 - - - - 0.909 0.875 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
59. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.548 0.851 - - - - 0.894 0.803 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
60. atp6v0cb ENSDARG00000036577 3472 2.547 0.744 - - - - 0.926 0.877 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
61. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.543 - - - - 0.747 0.934 0.862 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
62. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.541 0.919 - - - - 0.757 0.865 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
63. cnrip1a ENSDARG00000091683 1491 2.538 0.737 - - - - 0.915 0.886 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
64. snap25a ENSDARG00000020609 4537 2.537 0.762 - - - - 0.934 0.841 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
65. gabra5 ENSDARG00000070730 156 2.535 0.763 - - - - 0.894 0.878 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
66. mir10d-1 mir10d-1 860 2.535 0.754 - - - - 0.954 0.827 - -
67. slc1a3a ENSDARG00000104431 9888 2.532 0.704 - - - - 0.969 0.859 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
68. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.53 - 0.826 - - - 0.920 0.784 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
69. relnl relnl 863 2.529 - 0.805 - - - 0.928 0.796 - -
70. slc18a3a ENSDARG00000006356 1285 2.527 0.815 - - - - 0.829 0.883 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
71. bhlhe22 ENSDARG00000058039 1673 2.525 0.745 0.954 - - - - 0.826 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
72. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.519 0.709 - - - - 0.948 0.862 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
73. rap2ip rap2ip 681 2.514 0.777 - - - - 0.911 0.826 - -
74. atp1b4 ENSDARG00000053262 1337 2.512 0.733 - - - - 0.957 0.822 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
75. fyna ENSDARG00000011370 1679 2.511 - - - - - 0.733 0.833 0.945 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
76. rbfox1 ENSDARG00000014746 2808 2.51 0.721 - - - - 0.925 0.864 - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
77. PPFIA3 ENSDARG00000077053 310 2.506 0.860 - - - - 0.787 0.859 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
78. sh3gl2 sh3gl2 1305 2.501 0.762 - - - - 0.914 0.825 - -
79. adarb1a ENSDARG00000041609 476 2.5 0.728 - - - - 0.892 0.880 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
80. dpysl4 ENSDARG00000103490 534 2.499 0.830 - - - - 0.793 0.876 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
81. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.497 0.759 - - - - 0.921 0.817 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
82. SEMA7A ENSDARG00000078707 465 2.497 0.762 - - - - 0.913 0.822 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
83. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 2.489 - - - - - 0.877 0.730 0.882 - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
84. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.488 0.740 - - - - 0.849 0.899 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
85. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 2.484 0.822 - - - - - 0.832 0.830 - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
86. RASGRF2 RASGRF2 644 2.484 0.755 - - - - 0.862 0.867 - -
87. her15.2 her15.2 1701 2.483 - - - - - 0.887 0.825 0.771 -
88. pkib ENSDARG00000053110 527 2.474 - - - - - 0.888 0.738 0.848 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
89. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.472 0.797 - - - - 0.797 0.878 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
90. CU856359.2 CU856359.2 182 2.472 0.832 - - - - 0.849 0.791 - -
91. INA INA 950 2.47 0.761 - - - - 0.870 0.839 - -
92. epha4b ENSDARG00000011600 3110 2.46 0.760 - - - - 0.850 0.850 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
93. CABZ01088330.1 CABZ01088330.1 679 2.456 - - - - - 0.907 0.720 0.829 -
94. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.456 0.700 - - - - 0.884 0.872 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
95. add2 ENSDARG00000074581 1402 2.455 0.746 - - - - 0.892 0.817 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
96. zic5 ENSDARG00000016022 1034 2.453 - - - - - 0.822 0.738 0.893 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
97. EFCC1 ENSDARG00000077826 1359 2.452 0.806 - - - - 0.785 0.861 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
98. atpv0e2 ENSDARG00000059057 585 2.449 0.843 - - - - 0.828 0.778 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
99. SV2B SV2B 208 2.446 0.758 - - - - 0.890 0.798 - -
100. nxph1 ENSDARG00000033447 182 2.446 0.799 - - - - 0.853 0.794 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]

There are 2482 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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