Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for toporsa

Gene Name Gene ID Reads Annotation
toporsa ENSDARG00000037260 149 topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]










Genes with expression patterns similar to toporsa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. toporsa ENSDARG00000037260 149 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 topoisomerase I binding, arginine/serine-rich a [Source:ZFIN;Acc:ZDB-GENE-030131-6401]
2. CR339053.3 CR339053.3 244 1.749 0.976 - - - - 0.773 - - -
3. vhl ENSDARG00000070617 663 1.73 0.887 - - - - 0.843 - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
4. rims1a ENSDARG00000074680 143 1.717 0.878 - - - - 0.839 - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
5. ADCYAP1R1 ADCYAP1R1 118 1.674 - - - - - 0.935 0.739 - -
6. RAPH1 RAPH1 294 1.672 - - - - - 0.967 0.705 - -
7. tmem5 1630 1.67 0.715 - - - - 0.955 - - - transmembrane protein 5
8. dnaja1l dnaja1l 1536 1.658 0.746 - - - - 0.912 - - -
9. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.632 0.729 - - - - 0.903 - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
10. mnd1 ENSDARG00000074451 182 1.614 - 0.723 - - - 0.891 - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
11. mppe1 ENSDARG00000045416 340 1.576 - - - - - 0.803 0.773 - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
12. efna2 efna2 428 1.504 - - - - - 0.738 0.766 - -
13. slc7a6os ENSDARG00000010596 1599 1.47 - 0.701 - - - 0.769 - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
14. UIMC1_1 UIMC1_1 430 1.469 - 0.706 - - - 0.763 - - -
15. TXNDC16 ENSDARG00000032256 231 1.455 - 0.707 - - - 0.748 - - - thioredoxin domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-100712-1]
16. zgc:193681 187 1.44 - 0.707 - - - - 0.733 - - zgc:193681, transcript variant X1
17. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 1.429 0.703 - - - - 0.726 - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
18. CT573468.1 CT573468.1 283 0.996 0.996 - - - - - - - -
19. hspbp1 ENSDARG00000102937 260 0.988 - - - - - 0.988 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
20. SSBP2 ENSDARG00000099727 22 0.984 - - - - - 0.984 - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
21. si:rp71-36a1.1 ENSDARG00000095295 13 0.979 - - - - - 0.979 - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
22. PKN1 PKN1 42 0.978 - - - - - 0.978 - - -
23. kcng1 ENSDARG00000099038 23 0.977 - - - - - 0.977 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
24. msxe msxe 362 0.977 - - - - - 0.977 - - -
25. si:dkeyp-110e4.11 ENSDARG00000071585 148 0.976 0.976 - - - - - - - - si:dkeyp-110e4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-267]
26. RCVRN RCVRN 66 0.97 0.970 - - - - - - - -
27. plat ENSDARG00000062707 491 0.969 - - - - - 0.969 - - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
28. wu:fb63a08 38 0.968 0.968 - - - - - - - - wu:fb63a08
29. si:dkey-29b11.3 ENSDARG00000087388 29 0.968 0.968 - - - - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
30. SLC39A11 ENSDARG00000098194 23 0.968 0.968 - - - - - - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
31. si:dkey-222h21.11 ENSDARG00000092984 13 0.968 0.968 - - - - - - - - si:dkey-222h21.11 [Source:ZFIN;Acc:ZDB-GENE-081031-32]
32. zbtb14 ENSDARG00000098273 36 0.968 0.968 - - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
33. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 0.968 0.968 - - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
34. fgfr1b ENSDARG00000011190 10 0.968 0.968 - - - - - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
35. BX323449.2 BX323449.2 50 0.968 - - - - - 0.968 - - -
36. si:dkey-225k4.1 ENSDARG00000092045 47 0.968 0.968 - - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
37. si:dkey-228i19.34 si:dkey-228i19.34 43 0.968 0.968 - - - - - - - -
38. si:ch211-133l5.4 ENSDARG00000092533 5 0.968 0.968 - - - - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
39. ARX ARX 71 0.968 0.968 - - - - - - - -
40. oprl1 ENSDARG00000071209 58 0.968 0.968 - - - - - - - - opiate receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040312-4]
41. RNF39 RNF39 52 0.968 0.968 - - - - - - - -
42. PEG3_7 PEG3_7 15 0.968 0.968 - - - - - - - -
43. CU929036.1 CU929036.1 7 0.968 0.968 - - - - - - - -
44. si:ch211-229g14.3 ENSDARG00000095101 5 0.968 0.968 - - - - - - - - si:ch211-229g14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-187]
45. PPP2R2A PPP2R2A 50 0.968 0.968 - - - - - - - -
46. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 0.968 0.968 - - - - - - - -
47. bik ENSDARG00000045549 18 0.968 0.968 - - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
48. VASP VASP 22 0.968 0.968 - - - - - - - -
49. INF2 37 0.968 0.968 - - - - - - - - inverted formin, FH2 and WH2 domain containing
50. ampd2 ampd2 6 0.968 0.968 - - - - - - - -
51. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.968 0.968 - - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
52. U3_9 U3_9 4 0.968 0.968 - - - - - - - -
53. crym ENSDARG00000062817 171 0.968 0.968 - - - - - - - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
54. si:ch211-255a21.4 si:ch211-255a21.4 26 0.968 0.968 - - - - - - - -
55. FCHSD2 FCHSD2 35 0.968 0.968 - - - - - - - -
56. rnf11a ENSDARG00000010442 592 0.966 - - - - - 0.966 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
57. si:dkey-253d23.3 ENSDARG00000095643 66 0.965 0.965 - - - - - - - - si:dkey-253d23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-330]
58. kitlga ENSDARG00000070917 155 0.964 - - - - - 0.964 - - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
59. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 0.964 0.964 - - - - - - - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
60. znf692 ENSDARG00000078434 137 0.963 0.963 - - - - - - - - zinc finger protein 692 [Source:ZFIN;Acc:ZDB-GENE-081104-484]
61. DUSP19 DUSP19 10 0.962 - - - - - 0.962 - - -
62. pld3 ENSDARG00000068199 205 0.962 - - - - - 0.962 - - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
63. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 0.962 - - - - - 0.962 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
64. si:dkey-22o22.2 ENSDARG00000102445 149 0.96 - - - - - 0.960 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
65. aig1 ENSDARG00000007171 70 0.96 - - - - - 0.960 - - - androgen-induced 1 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-041014-358]
66. BX664721.5 BX664721.5 462 0.96 - - - - - 0.960 - - -
67. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 0.96 0.960 - - - - - - - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
68. pstpip1a ENSDARG00000060860 23 0.96 - - - - - 0.960 - - - proline-serine-threonine phosphatase interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050419-251]
69. nrp1b ENSDARG00000027290 170 0.96 - - - - - 0.960 - - - neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
70. si:ch211-240g9.1 36 0.959 - - - - - 0.959 - - - si:ch211-240g9.1
71. kctd1 ENSDARG00000074056 652 0.958 - - - - - 0.958 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
72. syt13 ENSDARG00000012306 298 0.958 - - - - - 0.958 - - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
73. CABZ01044814.2 CABZ01044814.2 25711 0.958 - - - - - 0.958 - - -
74. CAMK1 CAMK1 28 0.958 - - - - - 0.958 - - -
75. CNTNAP1 ENSDARG00000074524 73 0.958 - - - - - 0.958 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
76. si:ch211-223f7.1 si:ch211-223f7.1 38 0.958 - - - - - 0.958 - - -
77. CT955963.1 ENSDARG00000100370 23 0.958 - - - - - 0.958 - - -
78. sgms2 57 0.958 - - - - - 0.958 - - - sphingomyelin synthase 2, transcript variant X1
79. ADORA1 ADORA1 8 0.958 - - - - - 0.958 - - -
80. GPC6 GPC6 4 0.958 - - - - - 0.958 - - -
81. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.957 - - - - - 0.957 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
82. pcdh2g6 9 0.957 - - - - - 0.957 - - - protocadherin 2 gamma 6
83. scpp5 ENSDARG00000078622 15 0.957 - - - - - 0.957 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
84. slc35a5 ENSDARG00000000001 17 0.957 - - - - - 0.957 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
85. PFKFB1 ENSDARG00000037140 5 0.957 - - - - - 0.957 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
86. CABZ01062083.1 CABZ01062083.1 40 0.957 - - - - - 0.957 - - -
87. AL953879.1 AL953879.1 5 0.957 - - - - - 0.957 - - -
88. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 0.957 - - - - - 0.957 - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
89. ATXN1L ENSDARG00000086977 4 0.957 - - - - - 0.957 - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
90. zgc:154142 ENSDARG00000100792 42 0.957 - - - - - 0.957 - - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
91. CU062667.1 CU062667.1 4 0.957 - - - - - 0.957 - - -
92. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.957 - - - - - 0.957 - - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
93. PLCXD2 ENSDARG00000058200 8 0.957 - - - - - 0.957 - - - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
94. irgf1 ENSDARG00000070774 7 0.957 - - - - - 0.957 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
95. CABZ01079192.1 ENSDARG00000101629 23 0.957 - - - - - 0.957 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
96. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 0.957 - - - - - 0.957 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
97. retsatl ENSDARG00000034989 41 0.957 - - - - - 0.957 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
98. zgc:73349 zgc:73349 4 0.957 - - - - - 0.957 - - -
99. sdr42e1 ENSDARG00000098838 25 0.957 - - - - - 0.957 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
100. pdk2 pdk2 32 0.957 - - - - - 0.957 - - -

There are 1287 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA