Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nup43

Gene Name Gene ID Reads Annotation
nup43 ENSDARG00000043884 794 nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]










Genes with expression patterns similar to nup43

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nup43 ENSDARG00000043884 794 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]
2. tchp ENSDARG00000035605 1695 1.743 - - - - - - 0.754 0.989 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
3. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.698 - - - - - - 0.720 0.978 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
4. THEM4 ENSDARG00000061621 364 1.696 - - - - - - 0.708 0.988 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
5. ift46 ENSDARG00000011240 2499 1.692 - - - - - - 0.707 0.985 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
6. foxp1b ENSDARG00000014181 2594 1.668 - - - - - - 0.719 0.949 - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
7. galk2 ENSDARG00000004059 122 1.641 - 0.881 - - - - 0.760 - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
8. fzd3a ENSDARG00000021664 1958 1.612 - - - - - - - 0.872 0.740 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
9. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.599 - 0.760 - - - - - 0.839 - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
10. RHBDF1 RHBDF1 131 1.585 - 0.707 - - - - 0.878 - -
11. SURF2 ENSDARG00000112476 592 1.571 0.769 - - - - - 0.802 - - surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
12. ppm1g ENSDARG00000075559 6516 1.561 - - - 0.719 - - - 0.842 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
13. zgc:63637 zgc:63637 3636 1.557 - 0.736 - - - - - 0.821 -
14. znf395a ENSDARG00000060113 3874 1.521 - - - - 0.741 - - 0.780 - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
15. crym ENSDARG00000062817 171 1.499 - 0.708 - - - - 0.791 - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
16. rbm25 rbm25 3629 1.475 - - - 0.749 - - 0.726 - -
17. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 1.445 - - - 0.724 - - 0.721 - - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
18. med20 ENSDARG00000046006 614 0.998 - - - - - - - 0.998 - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
19. pold3 ENSDARG00000076169 694 0.995 - - - - - - - 0.995 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
20. crb2a ENSDARG00000060106 1307 0.992 - - - - - - - 0.992 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
21. chd5 ENSDARG00000105083 132 0.991 - - - - - - - 0.991 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
22. ZNF784_2 ZNF784_2 181 0.991 - - - - - - - 0.991 -
23. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.991 - - - - - - - 0.991 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
24. ppp1r8 ppp1r8 310 0.991 - - - - - - - 0.991 -
25. irf2a ENSDARG00000007387 915 0.99 - - - - - - - 0.990 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
26. SIPA1L3 ENSDARG00000061699 268 0.99 - - - - - - - 0.990 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
27. lrrc4.2 ENSDARG00000003020 235 0.99 - - - - - - - 0.990 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
28. KIRREL3 ENSDARG00000115903 206 0.99 - - - - - - - 0.990 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
29. rapgef1a ENSDARG00000043593 416 0.99 - - - - - - - 0.990 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
30. DEDD ENSDARG00000029783 530 0.99 - - - - - - - 0.990 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
31. ift20 ENSDARG00000040556 285 0.99 - - - - - - - 0.990 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
32. MANEAL ENSDARG00000056450 262 0.99 - - - - - - - 0.990 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
33. psmd5 ENSDARG00000059046 622 0.99 - - - - - - - 0.990 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
34. anapc5 ENSDARG00000008461 434 0.99 - - - - - - - 0.990 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
35. xkr6 xkr6 286 0.99 - - - - - - - 0.990 -
36. CABZ01038494.1 ENSDARG00000088258 908 0.99 - - - - - - - 0.990 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
37. wdr92 ENSDARG00000037334 329 0.99 - - - - - - - 0.990 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
38. eef1a1a ENSDARG00000039502 234 0.99 - - - - - - - 0.990 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
39. XKR7 ENSDARG00000026333 175 0.99 - - - - - - - 0.990 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
40. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.99 - - - - - - - 0.990 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
41. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.99 - - - - - - - 0.990 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
42. TTC28 ENSDARG00000114920 580 0.99 - - - - - - - 0.990 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
43. BX322612.1 BX322612.1 236 0.99 - - - - - - - 0.990 -
44. grna ENSDARG00000004954 189 0.989 - - - - - - - 0.989 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
45. SB:CB827 SB:CB827 245 0.989 - - - - - - - 0.989 -
46. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.989 - - - - - - - 0.989 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
47. nkain4 ENSDARG00000062699 377 0.989 - - - - - - - 0.989 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
48. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.989 - - - - - - - 0.989 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
49. CR354611.2 CR354611.2 2040 0.989 - - - - - - - 0.989 -
50. map7d2b ENSDARG00000045316 702 0.989 - - - - - - - 0.989 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
51. zgc:171727 ENSDARG00000105781 350 0.989 - - - - - - - 0.989 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
52. wdr47a ENSDARG00000078136 522 0.989 - - - - - - - 0.989 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
53. sh3bp5a ENSDARG00000100529 642 0.989 - - - - - - - 0.989 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
54. plk4 ENSDARG00000004576 688 0.989 - - - - - - - 0.989 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
55. epb41a ENSDARG00000099283 860 0.988 - - - - - - - 0.988 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
56. cetn2 ENSDARG00000101510 541 0.988 - - - - - - - 0.988 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
57. LTN1 ENSDARG00000003984 1076 0.988 - - - - - - - 0.988 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
58. LDLRAD4 LDLRAD4 1237 0.988 - - - - - - - 0.988 -
59. E2F1 ENSDARG00000103868 638 0.988 - - - - - - - 0.988 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
60. mapre3b ENSDARG00000102878 362 0.988 - - - - - - - 0.988 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
61. GANAB_1 GANAB_1 685 0.988 - - - - - - - 0.988 -
62. dok7 ENSDARG00000060236 364 0.988 - - - - - - - 0.988 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
63. sgsm3 ENSDARG00000019038 352 0.988 - - - - - - - 0.988 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
64. bsk146 ENSDARG00000099069 274 0.988 - - - - - - - 0.988 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
65. brd1a ENSDARG00000013596, ENSDARG00000116694 547 0.987 - - - - - - - 0.987 - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
66. si:ch211-195b13.1 ENSDARG00000016623 427 0.987 - - - - - - - 0.987 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
67. PRRT2 ENSDARG00000103588 913 0.987 - - - - - - - 0.987 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
68. LPL_1 LPL_1 1150 0.987 - - - - - - - 0.987 -
69. ank3a ENSDARG00000061736 361 0.987 - - - - - - - 0.987 - ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]
70. DVL3 1098 0.987 - - - - - - - 0.987 - dishevelled segment polarity protein 3
71. fzd3b ENSDARG00000058692 627 0.987 - - - - - - - 0.987 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
72. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.987 - - - - - - - 0.987 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
73. arih2 ENSDARG00000012848 7087 0.987 - - - - - - - 0.987 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
74. CABZ01073424.1 ENSDARG00000107858 688 0.987 - - - - - - - 0.987 -
75. ghitm 1443 0.987 - - - - - - - 0.987 - growth hormone inducible transmembrane protein
76. fam199x ENSDARG00000009982 967 0.986 - - - - - - - 0.986 - family with sequence similarity 199, X-linked [Source:ZFIN;Acc:ZDB-GENE-040808-24]
77. ezh1 ENSDARG00000037894 294 0.986 - - - - - - - 0.986 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
78. rnf216 ENSDARG00000087893 518 0.986 - - - - - - - 0.986 - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
79. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.986 - - - - - - - 0.986 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
80. B3GNT1 B3GNT1 601 0.985 - - - - - - - 0.985 -
81. actn2 actn2 1054 0.984 - - - - - - - 0.984 -
82. tnika ENSDARG00000056218 728 0.984 - - - - - - - 0.984 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
83. si:ch211-113a14.18 ENSDARG00000051735 1253 0.984 - - - - - - - 0.984 - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
84. suco ENSDARG00000016532 1609 0.984 - - - - - - - 0.984 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
85. MDFIC ENSDARG00000074223 781 0.984 - - - - - - - 0.984 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
86. ankrd10b ENSDARG00000004771 654 0.984 - - - - - - - 0.984 - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
87. fstl5 ENSDARG00000040198 213 0.984 - - - - - - - 0.984 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
88. PRKDC ENSDARG00000075083 693 0.984 - - - - - - - 0.984 - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
89. cdk7 ENSDARG00000051916 746 0.984 - - - - - - - 0.984 - cyclin-dependent kinase 7 [Source:ZFIN;Acc:ZDB-GENE-010320-2]
90. si:ch211-113e8.11 ENSDARG00000076585 721 0.984 - - - - - - - 0.984 - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
91. RBM33 RBM33 1954 0.983 - - - - - - - 0.983 -
92. pcdh10b ENSDARG00000102824 732 0.983 - - - - - - - 0.983 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
93. GRM2 GRM2 372 0.983 - - - - - - - 0.983 -
94. scmh1 ENSDARG00000104311, ENSDARG00000110119 413 0.983 - - - - - - - 0.983 - Scm polycomb group protein homolog 1 [Source:ZFIN;Acc:ZDB-GENE-070410-82]
95. SBNO2 SBNO2 773 0.983 - - - - - - - 0.983 -
96. zgc:171220 ENSDARG00000102959 164 0.982 - - - - - - - 0.982 - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
97. phf12a ENSDARG00000074303 1025 0.982 - - - - - - - 0.982 - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
98. dennd5a ENSDARG00000017006 3426 0.982 - - - - - - - 0.982 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
99. fezf1 ENSDARG00000010270 379 0.981 - - - - - - - 0.981 - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
100. brms1la ENSDARG00000006235 2011 0.981 - - - - - - - 0.981 - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]

There are 894 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA