Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tdp2b

Gene Name Gene ID Reads Annotation
tdp2b ENSDARG00000035954, ENSDARG00000109349 478 tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]










Genes with expression patterns similar to tdp2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
2. GANAB_1 GANAB_1 685 2.515 - 0.745 - 0.775 - - - 0.995 -
3. eef1a1a ENSDARG00000039502 234 1.938 - - - 0.940 - - - 0.998 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
4. ube2z ENSDARG00000029215 1059 1.889 - - - 0.917 - - - 0.972 - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
5. FBXL3 FBXL3 1769 1.868 - - - 0.922 - - - 0.946 -
6. si:ch211-113e8.11 ENSDARG00000076585 721 1.841 - - - 0.849 - - - 0.992 - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
7. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.834 - - - 0.853 - - - 0.981 - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
8. LDLRAD4 LDLRAD4 1237 1.831 - - - 0.843 - - - 0.988 -
9. CABZ01073424.1 ENSDARG00000107858 688 1.816 - - - 0.821 - - - 0.995 -
10. gipc1 ENSDARG00000104483 2913 1.796 - - - 0.824 - - - 0.972 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
11. irf2a ENSDARG00000007387 915 1.769 - - - 0.773 - - - 0.996 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
12. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 1.769 - 0.772 - - - - - 0.997 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
13. TDG TDG 1191 1.758 - - - 0.772 - - - 0.986 -
14. ezh1 ENSDARG00000037894 294 1.744 - - 0.749 - - - - 0.995 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
15. CU459152.1 CU459152.1 407 1.743 - - - - - 0.885 - 0.858 -
16. klc2 3058 1.742 - - - 0.797 - - - 0.945 - kinesin light chain 2
17. mfap1 ENSDARG00000018241 833 1.734 - - - 0.785 - - - 0.949 - microfibril associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1075]
18. suco ENSDARG00000016532 1609 1.733 - - - 0.740 - - - 0.993 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
19. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.73 - - - 0.756 - - - 0.974 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
20. slc6a14 ENSDARG00000029866 61 1.724 - - - 0.923 - 0.801 - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
21. NELL2A ENSDARG00000090690 840 1.715 0.753 - - - - - - 0.962 - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
22. maf1 ENSDARG00000013122 3365 1.707 - - - 0.806 - - - 0.901 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
23. sgsm3 ENSDARG00000019038 352 1.7 - 0.704 - - - - - 0.996 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
24. zgc:65772 zgc:65772 2092 1.687 - - - - - - 0.708 0.979 -
25. zgc:165515 ENSDARG00000116300 182 1.674 - - - 0.946 - - 0.728 - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
26. max ENSDARG00000024844 6035 1.669 - - - 0.819 - - - 0.850 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
27. METTL15 ENSDARG00000089236 39 1.661 - - 0.810 - - 0.851 - - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
28. foxp1b ENSDARG00000014181 2594 1.661 - 0.710 - - - - - 0.951 - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
29. si:dkey-66n24.2 si:dkey-66n24.2 69 1.651 - - 0.870 - - - 0.781 - -
30. si:dkey-15h8.15 ENSDARG00000102601 335 1.628 - 0.904 - 0.724 - - - - - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
31. e2f5 ENSDARG00000038812 388 1.624 - - 0.788 - - 0.836 - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
32. rem2 ENSDARG00000074064, ENSDARG00000109687 219 1.617 - 0.836 0.781 - - - - - - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
33. spryd7a ENSDARG00000052624 1059 1.61 - - - - - 0.723 - 0.887 - SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
34. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.609 0.716 - - 0.893 - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
35. pik3c3 ENSDARG00000054829 559 1.573 - - - 0.835 - - 0.738 - - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
36. zgc:175008 zgc:175008 55 1.571 - 0.741 0.830 - - - - - -
37. pnkd ENSDARG00000071032 447 1.57 - 0.729 - 0.841 - - - - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
38. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.568 - - - 0.705 - - - 0.863 - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
39. fam3c ENSDARG00000056152 3833 1.56 - - - 0.766 - - - 0.794 - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
40. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 1.553 0.708 - - 0.845 - - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
41. si:dkey-225d17.2 si:dkey-225d17.2 361 1.534 - 0.728 - - - 0.806 - - -
42. crygn2 ENSDARG00000030411 2551 1.523 - 0.712 - - - - - 0.811 - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
43. gpr98 gpr98 717 1.52 - 0.719 - 0.801 - - - - -
44. ENSDARG00000096553 ENSDARG00000096553 388 1.513 - - 0.757 - - - 0.756 - -
45. cx28.8 ENSDARG00000071042 62 1.501 - 0.732 - - - 0.769 - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
46. dnah12 ENSDARG00000059987 110 1.476 - 0.760 0.716 - - - - - - dynein, axonemal, heavy chain 12 [Source:ZFIN;Acc:ZDB-GENE-090311-9]
47. fybb ENSDARG00000044694 136 1.471 - 0.714 0.757 - - - - - - FYN binding protein b [Source:ZFIN;Acc:ZDB-GENE-091204-85]
48. vps33b ENSDARG00000044813 177 1.468 - - - - - 0.752 0.716 - - vacuolar protein sorting 33B [Source:ZFIN;Acc:ZDB-GENE-050327-73]
49. med19b ENSDARG00000009472 936 1.464 - 0.724 - 0.740 - - - - - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
50. gpr37b ENSDARG00000033296 283 1.461 0.730 0.731 - - - - - - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
51. stx11a ENSDARG00000044039 39 1.457 - 0.741 - - - 0.716 - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
52. tspear tspear 166 1.457 0.703 - 0.754 - - - - - -
53. aldh5a1 ENSDARG00000076544, ENSDARG00000113300 1021 1.454 - 0.710 - 0.744 - - - - - aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]
54. waca ENSDARG00000012577 1794 1.452 - 0.703 - 0.749 - - - - - WW domain containing adaptor with coiled-coil a [Source:ZFIN;Acc:ZDB-GENE-030131-2624]
55. shrprbck1r ENSDARG00000059871 362 1.451 - 0.727 - - - 0.724 - - - sharpin and rbck1 related [Source:ZFIN;Acc:ZDB-GENE-080220-52]
56. plcd1a ENSDARG00000059123 46 1.437 0.703 0.734 - - - - - - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
57. armc1l ENSDARG00000020887 1219 1.419 - 0.708 - 0.711 - - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
58. KIRREL3 ENSDARG00000115903 206 0.999 - - - - - - - 0.999 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
59. ZNF784_2 ZNF784_2 181 0.999 - - - - - - - 0.999 -
60. chd5 ENSDARG00000105083 132 0.999 - - - - - - - 0.999 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
61. BX322612.1 BX322612.1 236 0.999 - - - - - - - 0.999 -
62. XKR7 ENSDARG00000026333 175 0.999 - - - - - - - 0.999 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
63. xkr6 xkr6 286 0.999 - - - - - - - 0.999 -
64. ift20 ENSDARG00000040556 285 0.999 - - - - - - - 0.999 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
65. rapgef1a ENSDARG00000043593 416 0.998 - - - - - - - 0.998 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
66. SIPA1L3 ENSDARG00000061699 268 0.998 - - - - - - - 0.998 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
67. lrrc4.2 ENSDARG00000003020 235 0.998 - - - - - - - 0.998 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
68. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.998 - - - - - - - 0.998 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
69. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.998 - - - - - - - 0.998 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
70. grna ENSDARG00000004954 189 0.998 - - - - - - - 0.998 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
71. TTC28 ENSDARG00000114920 580 0.998 - - - - - - - 0.998 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
72. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.998 - - - - - - - 0.998 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
73. wdr92 ENSDARG00000037334 329 0.998 - - - - - - - 0.998 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
74. anapc5 ENSDARG00000008461 434 0.998 - - - - - - - 0.998 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
75. ppp1r8 ppp1r8 310 0.998 - - - - - - - 0.998 -
76. psmd5 ENSDARG00000059046 622 0.998 - - - - - - - 0.998 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
77. zgc:171727 ENSDARG00000105781 350 0.998 - - - - - - - 0.998 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
78. DEDD ENSDARG00000029783 530 0.998 - - - - - - - 0.998 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
79. map7d2b ENSDARG00000045316 702 0.997 - - - - - - - 0.997 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
80. THEM4 ENSDARG00000061621 364 0.997 - - - - - - - 0.997 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
81. nkain4 ENSDARG00000062699 377 0.997 - - - - - - - 0.997 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
82. ghitm 1443 0.997 - - - - - - - 0.997 - growth hormone inducible transmembrane protein
83. bsk146 ENSDARG00000099069 274 0.997 - - - - - - - 0.997 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
84. pold3 ENSDARG00000076169 694 0.997 - - - - - - - 0.997 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
85. dok7 ENSDARG00000060236 364 0.997 - - - - - - - 0.997 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
86. mapre3b ENSDARG00000102878 362 0.997 - - - - - - - 0.997 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
87. sh3bp5a ENSDARG00000100529 642 0.997 - - - - - - - 0.997 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
88. LPL_1 LPL_1 1150 0.996 - - - - - - - 0.996 -
89. si:ch211-195b13.1 ENSDARG00000016623 427 0.996 - - - - - - - 0.996 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
90. CR354611.2 CR354611.2 2040 0.996 - - - - - - - 0.996 -
91. LTN1 ENSDARG00000003984 1076 0.996 - - - - - - - 0.996 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
92. cetn2 ENSDARG00000101510 541 0.996 - - - - - - - 0.996 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
93. SB:CB827 SB:CB827 245 0.996 - - - - - - - 0.996 -
94. epb41a ENSDARG00000099283 860 0.996 - - - - - - - 0.996 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
95. plk4 ENSDARG00000004576 688 0.996 - - - - - - - 0.996 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
96. wdr47a ENSDARG00000078136 522 0.996 - - - - - - - 0.996 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
97. tchp ENSDARG00000035605 1695 0.995 - - - - - - - 0.995 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
98. PRRT2 ENSDARG00000103588 913 0.995 - - - - - - - 0.995 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
99. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.995 - - - - - - - 0.995 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
100. fzd3b ENSDARG00000058692 627 0.995 - - - - - - - 0.995 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]

There are 1542 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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