Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for htra1b

Gene Name Gene ID Reads Annotation
htra1b ENSDARG00000014907 146 HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]










Genes with expression patterns similar to htra1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. htra1b ENSDARG00000014907 146 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
2. si:ch211-149a19.3 ENSDARG00000079456 115 2.771 - - - - - 0.976 0.827 0.968 - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
3. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 2.529 - - - - - 0.803 0.894 0.832 - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
4. mid1 ENSDARG00000060482 154 2.361 0.741 - - - - 0.768 0.852 - - midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
5. paqr7a ENSDARG00000100462 15 1.989 1.000 - - - - 0.989 - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
6. NMUR1 NMUR1 30 1.969 1.000 - - - - - - 0.969 -
7. msxa msxa 263 1.961 1.000 - - - - - - 0.961 -
8. si:ch211-286e11.3 si:ch211-286e11.3 20 1.944 - - - - - 0.980 0.964 - -
9. TRIM35_7 TRIM35_7 22 1.931 - - - - - - 0.964 0.967 -
10. si:ch211-171h4.7 ENSDARG00000088408 168 1.914 1.000 - - - - 0.914 - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
11. si:ch211-274p24.4 ENSDARG00000087088 36 1.912 1.000 0.912 - - - - - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
12. and3 ENSDARG00000056873 22650 1.902 0.977 - - - - 0.925 - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
13. CABZ01068153.1 CABZ01068153.1 211 1.899 0.945 - - - - 0.954 - - -
14. CU929133.1 CU929133.1 94 1.896 - - - - - - 0.956 0.940 -
15. CIR1 ENSDARG00000099733 66 1.888 1.000 - - 0.888 - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
16. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.875 - - - - - 0.962 - 0.913 - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
17. trim23 ENSDARG00000069420 103 1.867 - 0.893 - - - 0.974 - - - tripartite motif containing 23 [Source:ZFIN;Acc:ZDB-GENE-060929-804]
18. mlh3 ENSDARG00000056334 142 1.862 - - - - - 0.969 0.893 - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
19. cnstb ENSDARG00000042759 105 1.827 0.838 - - - - 0.989 - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
20. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 1.81 - - - - - 0.883 - 0.927 - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
21. SLC16A7 ENSDARG00000098258 4 1.802 1.000 0.802 - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
22. C3AR1 18 1.802 1.000 0.802 - - - - - - - C3a anaphylatoxin chemotactic receptor
23. edil3 edil3 24 1.802 1.000 0.802 - - - - - - -
24. GBF1 ENSDARG00000027016 30 1.791 - 0.802 - - - 0.989 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-081107-54]
25. hist2h3c ENSDARG00000094154 124 1.786 0.905 - - - - 0.881 - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
26. inpp5e ENSDARG00000103926 567 1.785 0.934 - - - - 0.851 - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
27. abl2 ENSDARG00000013841 145 1.779 - - - 0.863 - - - 0.916 - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
28. CABZ01044023.1 ENSDARG00000117734 240 1.778 0.811 - - - - - - 0.967 -
29. pus7l_1 ENSDARG00000069780 49 1.774 - 0.802 - - - - - 0.972 - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
30. xdh ENSDARG00000055240 250 1.77 1.000 - - - - - - 0.770 - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
31. tspan15 ENSDARG00000039455, ENSDARG00000110074, ENSDARG00000112969 76 1.768 - - - - - - 0.859 0.909 - tetraspanin 15 [Source:ZFIN;Acc:ZDB-GENE-050417-295]
32. fam46a fam46a 92 1.754 - 0.829 - - - 0.925 - - -
33. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.749 1.000 - - 0.749 - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
34. slc8a4a ENSDARG00000055154 90 1.748 0.946 0.802 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
35. CABZ01049057.1 CABZ01049057.1 479 1.746 - - - - - - 0.846 0.900 -
36. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1.736 - 0.802 - - - - - 0.934 - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
37. pik3cg ENSDARG00000017757 157 1.734 - 0.780 - - - - - 0.954 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
38. HPS6 265 1.734 - - - 0.805 - - 0.929 - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
39. CU367845.1 CU367845.1 215 1.734 0.756 - - - - 0.978 - - -
40. luzp2 ENSDARG00000068247 80 1.717 - - - 0.860 - 0.857 - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
41. btbd3a ENSDARG00000005544 595 1.716 1.000 0.716 - - - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
42. ecm2 ENSDARG00000071549 1527 1.696 - - - - - 0.823 - 0.873 - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
43. ctgfb ENSDARG00000104292 69 1.69 - 0.893 - - - 0.797 - - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
44. si:dkey-163m14.7 65 1.683 - 0.802 - - - - 0.881 - - si:dkey-163m14.7
45. coro2ba ENSDARG00000079440 420 1.681 - - - 0.813 - - - 0.868 - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
46. zgc:174863 ENSDARG00000099476, ENSDARG00000116416 411 1.68 - - - - - - 0.967 0.713 - zgc:174863 [Source:ZFIN;Acc:ZDB-GENE-080204-87]
47. dhrs13a.2 ENSDARG00000111240 491 1.678 - - - 0.778 - - - 0.900 - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
48. CR788231.1 CR788231.1 61 1.676 - - - 0.828 - 0.848 - - -
49. APOL4 APOL4 27 1.673 0.794 - - - - 0.879 - - -
50. gnai2b ENSDARG00000017294 686 1.673 0.750 - - - - - - 0.923 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
51. ttc36 ENSDARG00000011693 61 1.672 - - - - - 0.868 - 0.804 - tetratricopeptide repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-041114-87]
52. tmem129 ENSDARG00000075346 109 1.661 - - - 0.804 - - 0.857 - - transmembrane protein 129, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2796]
53. doc2d ENSDARG00000079962 76 1.657 - - 0.731 - - - 0.926 - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
54. STRN ENSDARG00000100011 308 1.648 - 0.747 - - - - - 0.901 - striatin, calmodulin binding protein [Source:ZFIN;Acc:ZDB-GENE-070112-1172]
55. gdf6a ENSDARG00000053479 121 1.645 - - - 0.729 - - - 0.916 - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
56. zp3a.2 ENSDARG00000042130 163 1.644 0.913 - 0.731 - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040727-2]
57. mthfd2 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 179 1.633 - 0.755 - 0.878 - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
58. crfb8 crfb8 392 1.632 - - - - - - 0.733 0.899 -
59. ltc4s ENSDARG00000062598 138 1.631 - 0.702 - - - - - 0.929 - leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
60. vcana ENSDARG00000103515 611 1.628 0.773 - - - - 0.855 - - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
61. SMAD4_3 SMAD4_3 131 1.627 - - - 0.826 - 0.801 - - -
62. si:ch211-154o6.3 ENSDARG00000099846, ENSDARG00000112144 203 1.626 - - - - - 0.776 - 0.850 - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
63. C25H15orf27 C25H15orf27 69 1.625 0.713 0.912 - - - - - - -
64. si:ch211-181d7.3 ENSDARG00000068621 87 1.615 0.717 - - - - - 0.898 - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
65. phactr3a ENSDARG00000058243 150 1.61 0.871 - - 0.739 - - - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
66. dpf2 ENSDARG00000012219 666 1.601 - - - - - 0.773 0.828 - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
67. mxra5b ENSDARG00000076309 190 1.592 - 0.768 - - - - - 0.824 - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
68. gbgt1l4 ENSDARG00000068503 1009 1.591 - - - - - 0.768 0.823 - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-031204-4]
69. rps6kb1a ENSDARG00000018399 627 1.59 - - - 0.792 - - 0.798 - - ribosomal protein S6 kinase b, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-091113-52]
70. CR936200.1 CR936200.1 327 1.59 0.876 - - - - - - 0.714 -
71. cog5 ENSDARG00000008235 222 1.588 - - - - - 0.855 0.733 - - component of oligomeric golgi complex 5 [Source:ZFIN;Acc:ZDB-GENE-041210-47]
72. si:dkey-196j8.2 ENSDARG00000093874 55 1.587 0.819 0.768 - - - - - - - si:dkey-196j8.2 [Source:ZFIN;Acc:ZDB-GENE-081107-58]
73. BX005272.1 BX005272.1 553 1.575 - - - 0.798 - - 0.777 - -
74. spata2l ENSDARG00000068814 152 1.573 - - - - 0.708 0.865 - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
75. dpf1 ENSDARG00000099927, ENSDARG00000115986 138 1.566 - - - - - 0.771 0.795 - - D4, zinc and double PHD fingers family 1 [Source:ZFIN;Acc:ZDB-GENE-050913-31]
76. CABZ01032467.1 CABZ01032467.1 400 1.556 - - - - - 0.765 - 0.791 -
77. FAM117B FAM117B 225 1.55 - - - 0.754 - - - 0.796 -
78. itih5 ENSDARG00000045517 374 1.549 - - - - - 0.777 - 0.772 - inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
79. CR774186.2 CR774186.2 104 1.544 0.760 - - - - 0.784 - - -
80. hace1 ENSDARG00000062280 556 1.54 - - - - 0.716 0.824 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-110411-52]
81. wtip ENSDARG00000103607 797 1.538 - - - 0.729 - - - 0.809 - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
82. prmt6 ENSDARG00000069706 484 1.537 - - - - - 0.751 - 0.786 - protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
83. TUBB6 ENSDARG00000104801 121 1.531 - - - 0.746 - - 0.785 - - tubulin, beta 6 class V [Source:ZFIN;Acc:ZDB-GENE-070424-195]
84. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 1.525 - - - - - 0.757 0.768 - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
85. DEAF1 ENSDARG00000088844 380 1.524 - 0.701 - - - - 0.823 - - DEAF1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-081022-163]
86. si:dkey-20l4.2 si:dkey-20l4.2 110 1.514 0.723 0.791 - - - - - - -
87. MUC5AC_1 MUC5AC_1 381 1.507 - 0.802 - - - - 0.705 - -
88. MARVELD3 ENSDARG00000099654 325 1.5 - - - - - - 0.717 0.783 - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
89. ing1 ENSDARG00000019116 394 1.5 0.723 - - - - 0.777 - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
90. pars2 ENSDARG00000044404, ENSDARG00000109425 271 1.483 0.754 0.729 - - - - - - - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
91. dfna5 dfna5 361 1.478 - 0.760 - 0.718 - - - - -
92. CABZ01072585.1 CABZ01072585.1 1587 1.478 - - - - - 0.776 - 0.702 -
93. pcdh7b ENSDARG00000060610 400 1.473 - - - - - - 0.706 0.767 - protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]
94. fktn ENSDARG00000059437, ENSDARG00000109351 340 1.468 - 0.756 - - - - - 0.712 - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
95. col4a4 ENSDARG00000002831 803 1.465 0.752 - - - - 0.713 - - - collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
96. PLXDC2 ENSDARG00000059950 220 1.464 - 0.753 - 0.711 - - - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
97. si:ch211-241b2.1 ENSDARG00000102950 526 1.464 - - - 0.754 - - 0.710 - - si:ch211-241b2.1 [Source:ZFIN;Acc:ZDB-GENE-070705-131]
98. ptpn3 ENSDARG00000055784 436 1.449 - - - - - - 0.715 0.734 - protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]
99. capn5a ENSDARG00000103317 1923 1.437 - - - - - - 0.733 0.704 - calpain 5a [Source:ZFIN;Acc:ZDB-GENE-061103-214]
100. galnt7 ENSDARG00000057303 2017 1.43 - - - - - - 0.723 0.707 - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]

There are 1778 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA