Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cmlc1

Gene Name Gene ID Reads Annotation
cmlc1 ENSDARG00000032976 455 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]










Genes with expression patterns similar to cmlc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cmlc1 ENSDARG00000032976 455 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
2. myl7 ENSDARG00000019096 1023 3.862 - - 0.958 0.989 - - - 0.963 0.952 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
3. tnnt2a ENSDARG00000020610 313 3.842 - - 0.918 0.992 - - - 0.978 0.954 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
4. tnni1b ENSDARG00000052708 478 3.732 - - 0.929 0.963 - - - 0.883 0.957 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
5. vmhc 234 3.725 - - 0.884 0.966 - - - 0.976 0.899 ventricular myosin heavy chain
6. tnnc1a ENSDARG00000011400 165 3.722 - - 0.829 0.953 - - - 0.975 0.965 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
7. nppa ENSDARG00000052960 295 3.509 - - 0.775 0.924 - - - 0.870 0.940 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
8. vmhcl 119 3.506 1.000 - 0.871 0.741 - - - - 0.894 ventricular myosin heavy chain-like
9. lmod2b ENSDARG00000045864 63 3.345 - - - 0.869 - - 1.000 0.768 0.708 leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
10. hspb12 139 2.819 - - 0.918 0.976 - - - - 0.925 heat shock protein, alpha-crystallin-related, b12
11. csrp3 ENSDARG00000101706 21 2.746 - - - 0.925 - - - 0.936 0.885 cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]
12. si:ch211-260o22.1 si:ch211-260o22.1 34 2.549 - - - 0.857 - - - 0.976 0.716
13. fhl2a ENSDARG00000042018 244 2.544 - - 0.866 0.942 - - - - 0.736 four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
14. hand2 ENSDARG00000008305 1214 2.326 - - - 0.763 - - - 0.771 0.792 heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
15. PLCG2 ENSDARG00000068763 11 2 1.000 - - - - - 1.000 - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
16. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 2 1.000 - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
17. gpr155a ENSDARG00000090804 27 2 1.000 - - - - - 1.000 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
18. KAZN_1 KAZN_1 13 2 1.000 - - - - - 1.000 - -
19. si:dkey-21n8.3 si:dkey-21n8.3 5 2 1.000 - - - - - 1.000 - -
20. flnb ENSDARG00000092281 10 2 1.000 - - - - - 1.000 - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
21. lft2 ENSDARG00000044059 46 1.854 - - 0.900 0.954 - - - - - lefty2 [Source:ZFIN;Acc:ZDB-GENE-990630-11]
22. aste1 5 1.832 - - - - - - 1.000 0.832 - asteroid homolog 1 (Drosophila)
23. CABZ01070852.2 ENSDARG00000114999 16 1.808 1.000 - - - - - 0.808 - -
24. CR847543.1 ENSDARG00000086708 155 1.771 1.000 - - 0.771 - - - - -
25. SLC39A8 ENSDARG00000056757 52 1.758 1.000 - - - - - 0.758 - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
26. ETS1 ENSDARG00000024431 6 1.754 1.000 - - - - - - - 0.754 v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
27. Metazoa_SRP_24 Metazoa_SRP_24 4 1.754 1.000 - - - - - - - 0.754
28. PLA2G10 PLA2G10 9 1.729 - - - - - - 1.000 0.729 -
29. dbh ENSDARG00000069446, ENSDARG00000114942 60 1.726 - - - - - - - 0.861 0.865 dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
30. si:ch211-117m22.2 si:ch211-117m22.2 60 1.719 1.000 - 0.719 - - - - - -
31. GRM1 GRM1 4 1.719 - - - 0.719 - - 1.000 - -
32. ryr2b ENSDARG00000003706 6 1.705 - - - - - - - 0.832 0.873 ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
33. adprhl1 ENSDARG00000041589 34 1.67 - - - 0.746 - - - 0.924 - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
34. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.662 - - - - - - - 0.947 0.715 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
35. si:ch211-196n4.5 si:ch211-196n4.5 63 1.618 0.881 - - - - - - 0.737 -
36. LRRC30 LRRC30 83 1.606 - - - - 0.860 - 0.746 - -
37. BX323876.3 BX323876.3 19 1.602 - - - - - - - 0.717 0.885
38. mir148 75 1.597 - - - 0.711 - - - - 0.886 microRNA 148
39. si:dkey-54j5.1 si:dkey-54j5.1 4 1.586 - - - - - - - 0.832 0.754
40. spo11 ENSDARG00000013837 7 1.586 - - - - - - - 0.832 0.754 SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
41. tlx1 ENSDARG00000003965 67 1.582 - - - - - - - 0.717 0.865 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
42. COL9A1 COL9A1 264 1.557 - - - - - - - 0.838 0.719
43. foxf2a ENSDARG00000017195 345 1.552 - - - 0.737 - - - 0.815 - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
44. s100s ENSDARG00000036773 90 1.535 - - - - - - - 0.796 0.739 S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
45. cyp26b1 ENSDARG00000077121 1364 1.47 - - - - - - - 0.746 0.724 cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
46. si:ch211-15j21.2 si:ch211-15j21.2 13 1.428 - - - - - - 0.722 - 0.706
47. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
48. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
49. tmem37 ENSDARG00000059305 19 1 - - - - - - 1.000 - - transmembrane protein 37 [Source:ZFIN;Acc:ZDB-GENE-040426-2208]
50. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
51. si:ch211-194e1.8 si:ch211-194e1.8 14 1 1.000 - - - - - - - -
52. cyb561 ENSDARG00000038176 55 1 1.000 - - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
53. PEG3_21 PEG3_21 2 1 1.000 - - - - - - - -
54. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
55. SOX8 SOX8 22 1 1.000 - - - - - - - -
56. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
57. smpd3 ENSDARG00000098226 1 1 1.000 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
58. TRIM14_10 TRIM14_10 9 1 - - - - - - 1.000 - -
59. gp1bb ENSDARG00000074441 116 1 1.000 - - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
60. cx34.5 ENSDARG00000069411 3 1 1.000 - - - - - - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
61. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
62. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
63. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
64. FP236168.1 FP236168.1 150 1 1.000 - - - - - - - -
65. sez6a ENSDARG00000100876 35 1 1.000 - - - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
66. si:dkey-230i18.1 si:dkey-230i18.1 3 1 1.000 - - - - - - - -
67. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - - - - - 1.000 - -
68. BX323854.1 ENSDARG00000030778 3 1 - - - - - - 1.000 - -
69. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
70. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
71. RNH1_2 RNH1_2 12 1 - - - - - - 1.000 - -
72. lrmp ENSDARG00000045574 26 1 - - - - - - 1.000 - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
73. FAM196B FAM196B 1 1 1.000 - - - - - - - -
74. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
75. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
76. ROCK2 ROCK2 8 1 - - - - - - 1.000 - -
77. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1 1.000 - - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
78. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
79. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
80. cyp19a1b ENSDARG00000098360 8 1 1.000 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
81. zgc:195077 ENSDARG00000070852 1 1 - - - - - - 1.000 - - zgc:195077 [Source:ZFIN;Acc:ZDB-GENE-080724-9]
82. col28a1 col28a1 5 1 1.000 - - - - - - - -
83. TRIM14_12 TRIM14_12 1 1 - - - - - - 1.000 - -
84. tusc3 ENSDARG00000078854 4 1 - - - - - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
85. BX571739.1 BX571739.1 45 1 1.000 - - - - - - - -
86. BX511065.1 BX511065.1 214 1 - - - - - - 1.000 - -
87. si:zfos-979f1.2 ENSDARG00000011652 24 1 1.000 - - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
88. BX119963.1 ENSDARG00000096135 28 1 1.000 - - - - - - - -
89. ano6 ENSDARG00000061544 21 1 1.000 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
90. qkib ENSDARG00000002026 15 1 - - - - - - 1.000 - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]
91. loxhd1b ENSDARG00000074638 6 1 1.000 - - - - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
92. mmachc ENSDARG00000043877 29 1 1.000 - - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
93. si:ch211-219a15.4 ENSDARG00000068951 3 1 1.000 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
94. brpf3 brpf3 15 1 1.000 - - - - - - - -
95. pla2g15 ENSDARG00000103271 4 1 1.000 - - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
96. fgf24 ENSDARG00000037677 242 1 1.000 - - - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
97. CR762484.2 CR762484.2 42 1 - - - - - - 1.000 - -
98. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
99. ebf1b ENSDARG00000069196 64 1 - - - - - - 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
100. tbx5b ENSDARG00000092060 37 1 1.000 - - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]

There are 1001 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA