Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vmhcl

Gene Name Gene ID Reads Annotation
vmhcl 119 ventricular myosin heavy chain-like










Genes with expression patterns similar to vmhcl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vmhcl 119 7 1.000 - 1.000 1.000 1.000 - 1.000 1.000 1.000 ventricular myosin heavy chain-like
2. nppa ENSDARG00000052960 295 3.63 - - 0.850 0.886 0.917 - - - 0.977 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
3. vmhc 234 3.526 - - 0.849 0.839 0.855 - - - 0.983 ventricular myosin heavy chain
4. cmlc1 ENSDARG00000032976 455 3.506 1.000 - 0.871 0.741 - - - - 0.894 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
5. tnnt2a ENSDARG00000020610 313 3.259 - - 0.790 0.774 0.752 - - - 0.943 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
6. BX119963.1 ENSDARG00000096135 28 2.713 1.000 - - 0.821 - - 0.892 - -
7. si:ch211-260o22.1 si:ch211-260o22.1 34 2.614 - - 0.767 0.930 0.917 - - - -
8. myl7 ENSDARG00000019096 1023 2.579 - - 0.828 - 0.798 - - - 0.953 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
9. tnni1b ENSDARG00000052708 478 2.541 - - 0.772 - 0.853 - - - 0.916 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
10. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 2.407 - - - 0.839 0.789 - - - 0.779 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
11. col28a1 col28a1 5 2 1.000 - - - - - 1.000 - -
12. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 2 1.000 - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
13. gpr155a ENSDARG00000090804 27 1.916 1.000 - - 0.916 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
14. ETS1 ENSDARG00000024431 6 1.88 1.000 - - - - - - - 0.880 v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
15. si:ch211-264e16.2 ENSDARG00000094415 4 1.88 - - - - - - 1.000 - 0.880 si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
16. Metazoa_SRP_24 Metazoa_SRP_24 4 1.88 1.000 - - - - - - - 0.880
17. cacnb2a ENSDARG00000099045 374 1.863 1.000 - - - - - - 0.863 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
18. ryr2b ENSDARG00000003706 6 1.863 - - - 0.916 - - - - 0.947 ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
19. ZBTB40 ENSDARG00000091762 57 1.822 1.000 - - - - - 0.822 - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
20. hspb12 139 1.788 - - 0.851 - - - - - 0.937 heat shock protein, alpha-crystallin-related, b12
21. htra3a ENSDARG00000052895 28 1.779 - - - 0.916 - - - 0.863 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
22. adck3 83 1.772 1.000 - - - - - 0.772 - - aarF domain containing kinase 3
23. SOX8 SOX8 22 1.769 1.000 - - - 0.769 - - - -
24. mlphb ENSDARG00000062481 14 1.769 - - - - 0.769 - 1.000 - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
25. sele ENSDARG00000009123 122 1.769 1.000 - - - 0.769 - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
26. CU694374.3 CU694374.3 28 1.734 1.000 - - 0.734 - - - - -
27. dbh ENSDARG00000069446, ENSDARG00000114942 60 1.716 - - - 0.789 - - - - 0.927 dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
28. edn3b ENSDARG00000086669 8 1.706 - - 0.937 - 0.769 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
29. ndufv3_1 ENSDARG00000090389 25 1.679 0.859 - - - - - 0.820 - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
30. pcdh2g16 1 1.649 - - - - 0.769 - - - 0.880 protocadherin 2 gamma 16
31. ssh1a ENSDARG00000056780 3 1.649 - - - - 0.769 - - - 0.880 slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
32. ENSDARG00000088389 ENSDARG00000088389 2 1.649 - - - - 0.769 - - - 0.880
33. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 1.644 - - - - 0.822 - 0.822 - - transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
34. CLIC6 ENSDARG00000099108 10 1.627 - - 0.815 - 0.812 - - - - chloride intracellular channel 6 [Source:ZFIN;Acc:ZDB-GENE-121214-172]
35. si:ch211-15j21.2 si:ch211-15j21.2 13 1.573 - - - 0.742 - - - - 0.831
36. DMBX1 DMBX1 140 1.553 - - 0.821 - 0.732 - - - -
37. fhl2a ENSDARG00000042018 244 1.544 - - - - 0.777 - - - 0.767 four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
38. adprhl1 ENSDARG00000041589 34 1.541 - - - - 0.766 - - - 0.775 ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
39. CU326366.2 ENSDARG00000068593 11 1.533 - - - - 0.769 - 0.764 - -
40. helt ENSDARG00000056400 482 1.532 - - 0.784 - 0.748 - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
41. acta2 ENSDARG00000045180 96 1.53 - - - - 0.740 - - - 0.790 actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
42. s100s ENSDARG00000036773 90 1.525 - - - - - - 0.742 - 0.783 S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
43. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.515 0.746 - - - 0.769 - - - -
44. nr5a1b ENSDARG00000023362 54 1.5 0.780 - - 0.720 - - - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
45. si:dkey-29j8.2 ENSDARG00000096000 2 1.498 - - 0.723 - - - - - 0.775 si:dkey-29j8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-58]
46. casz1 ENSDARG00000037030 85 1.414 0.702 - - - - - 0.712 - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
47. galca ENSDARG00000037064 12 1 - - - - - - 1.000 - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
48. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
49. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
50. FP236168.1 FP236168.1 150 1 1.000 - - - - - - - -
51. sez6a ENSDARG00000100876 35 1 1.000 - - - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
52. si:dkey-230i18.1 si:dkey-230i18.1 3 1 1.000 - - - - - - - -
53. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
54. gp1bb ENSDARG00000074441 116 1 1.000 - - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
55. cx34.5 ENSDARG00000069411 3 1 1.000 - - - - - - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
56. SPP2 ENSDARG00000095590 5 1 - - - - - - 1.000 - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
57. CU183952.2 CU183952.2 6 1 - - - - - - 1.000 - -
58. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
59. smpd3 ENSDARG00000098226 1 1 1.000 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
60. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
61. PEG3_21 PEG3_21 2 1 1.000 - - - - - - - -
62. si:ch211-194e1.8 si:ch211-194e1.8 14 1 1.000 - - - - - - - -
63. CABZ01070852.2 ENSDARG00000114999 16 1 1.000 - - - - - - - -
64. cyb561 ENSDARG00000038176 55 1 1.000 - - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
65. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
66. si:dkey-246j7.1 ENSDARG00000095559 4 1 - - - - - - 1.000 - - si:dkey-246j7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-230]
67. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
68. cyp19a1b ENSDARG00000098360 8 1 1.000 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
69. CR847543.1 ENSDARG00000086708 155 1 1.000 - - - - - - - -
70. pacrg ENSDARG00000087556 25 1 - - - - - - 1.000 - - PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
71. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
72. PLCG2 ENSDARG00000068763 11 1 1.000 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
73. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
74. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1 1.000 - - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
75. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
76. zgc:113098 zgc:113098 22 1 - - - - - - 1.000 - -
77. FAM196B FAM196B 1 1 1.000 - - - - - - - -
78. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
79. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
80. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
81. diaph2 ENSDARG00000076060 26 1 - - - - - - 1.000 - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
82. tbx5b ENSDARG00000092060 37 1 1.000 - - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
83. fgf24 ENSDARG00000037677 242 1 1.000 - - - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
84. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
85. pla2g15 ENSDARG00000103271 4 1 1.000 - - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
86. si:ch211-219a15.4 ENSDARG00000068951 3 1 1.000 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
87. brpf3 brpf3 15 1 1.000 - - - - - - - -
88. loxhd1b ENSDARG00000074638 6 1 1.000 - - - - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
89. adat3 ENSDARG00000005640 96 1 - - - - - - 1.000 - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
90. mmachc ENSDARG00000043877 29 1 1.000 - - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
91. CEACAM7 CEACAM7 46 1 - - - - - - 1.000 - -
92. ano6 ENSDARG00000061544 21 1 1.000 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
93. si:zfos-979f1.2 ENSDARG00000011652 24 1 1.000 - - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
94. tmc6a ENSDARG00000069787 3 1 - - - - - - 1.000 - - transmembrane channel-like 6a [Source:ZFIN;Acc:ZDB-GENE-081114-3]
95. v2ra1 ENSDARG00000104881 1 1 - - - - - - 1.000 - - vomeronasal 2 receptor, a1 [Source:ZFIN;Acc:ZDB-GENE-050419-156]
96. BX571739.1 BX571739.1 45 1 1.000 - - - - - - - -
97. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 - - - - - - 1.000 - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
98. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1 1.000 - - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
99. clic2 ENSDARG00000010625, ENSDARG00000110125, ENSDARG00000115320 273 1 1.000 - - - - - - - - chloride intracellular channel 2 [Source:ZFIN;Acc:ZDB-GENE-040718-299]
100. si:ch211-255i3.4 ENSDARG00000095152 7 1 1.000 - - - - - - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]

There are 1085 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA