Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col28a1

Gene Name Gene ID Reads Annotation
col28a1 col28a1 5










Genes with expression patterns similar to col28a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col28a1 col28a1 5 5 1.000 1.000 - - 1.000 - 1.000 - 1.000
2. ndufv3_1 ENSDARG00000090389 25 2.46 0.859 - - - - - 0.820 - 0.781 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
3. si:ch211-170d12.2 si:ch211-170d12.2 1 2 1.000 - - - 1.000 - - - -
4. SNORA81_1 SNORA81_1 8 2 1.000 1.000 - - - - - - -
5. vmhcl 119 2 1.000 - - - - - 1.000 - - ventricular myosin heavy chain-like
6. camk1db ENSDARG00000017446 47 2 - 1.000 - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
7. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 2 1.000 - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
8. fam163b ENSDARG00000073914 46 2 1.000 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
9. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 2 1.000 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
10. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
11. tbx5b ENSDARG00000092060 37 2 1.000 1.000 - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
12. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
13. hoxc9a ENSDARG00000092809 18 2 1.000 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
14. ddx26b 79 2 1.000 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
15. ifit2 ifit2 11 2 1.000 1.000 - - - - - - -
16. GMEB2 ENSDARG00000093240 6 2 1.000 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
17. arl11l arl11l 31 2 1.000 1.000 - - - - - - -
18. si:ch211-10p21.1 si:ch211-10p21.1 6 2 1.000 - - - 1.000 - - - -
19. SRCIN1_1 SRCIN1_1 11 1.942 - 1.000 - - 0.942 - - - -
20. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.942 - - - - 0.942 - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
21. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
22. BX119963.1 ENSDARG00000096135 28 1.892 1.000 - - - - - 0.892 - -
23. ABCA7 ABCA7 12 1.829 - 1.000 - - - - - - 0.829
24. si:ch211-176g6.1 ENSDARG00000096522 8 1.829 - 1.000 - - - - - - 0.829 si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
25. si:ch211-13k12.1 si:ch211-13k12.1 25 1.822 - 1.000 - - - - 0.822 - -
26. ZBTB40 ENSDARG00000091762 57 1.822 1.000 - - - - - 0.822 - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
27. adck3 83 1.772 1.000 - - - - - 0.772 - - aarF domain containing kinase 3
28. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
29. cpeb1a ENSDARG00000045932 81 1.737 0.915 0.822 - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
30. abcc6a ENSDARG00000016750 10 1.702 - 1.000 - - - - 0.702 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
31. SLC15A5 ENSDARG00000089974 18 1.685 - - - - 0.782 - 0.903 - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
32. wu:fe36b12 wu:fe36b12 118 1.566 - 0.844 - - - - 0.722 - -
33. lbx1b ENSDARG00000018611 399 1.498 - 0.789 - - - - 0.709 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
34. casz1 ENSDARG00000037030 85 1.414 0.702 - - - - - 0.712 - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
35. ACTR3_1 ACTR3_1 2 1 - 1.000 - - - - - - -
36. TMC2 TMC2 5 1 - 1.000 - - - - - - -
37. cyp2j20 ENSDARG00000094057 44 1 - 1.000 - - - - - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
38. itga2.2 ENSDARG00000062974 27 1 1.000 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
39. sst2 ENSDARG00000014190 617 1 - 1.000 - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
40. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
41. mrc1b ENSDARG00000038822 73 1 1.000 - - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
42. AGAP2 ENSDARG00000099874 151 1 - 1.000 - - - - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
43. CABZ01076534.1 CABZ01076534.1 1 1 1.000 - - - - - - - -
44. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - - - - - 1.000 - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
45. tap1 ENSDARG00000079766 75 1 - 1.000 - - - - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
46. BX322608.1 ENSDARG00000111690 326 1 - - - - - - 1.000 - -
47. si:ch73-30l9.1 ENSDARG00000095891 42 1 - - - - - - 1.000 - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
48. CT573389.1 CT573389.1 26 1 - - - - - - 1.000 - -
49. URB1 ENSDARG00000060308 78 1 1.000 - - - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
50. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
51. ENSDARG00000090360 ENSDARG00000090360 0 1 - - - - 1.000 - - - -
52. U6_32 U6_32 0 1 - 1.000 - - - - - - -
53. katna1 ENSDARG00000021827 221 1 1.000 - - - - - - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
54. BX323854.3 BX323854.3 62 1 1.000 - - - - - - - -
55. atxn1b ENSDARG00000060862 345 1 - 1.000 - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
56. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 1.000 - - - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
57. gucy1b3 92 1 - 1.000 - - - - - - - guanylate cyclase 1, soluble, beta 3
58. slc26a3 slc26a3 0 1 - - - - 1.000 - - - -
59. cfhl5 ENSDARG00000105052 25 1 1.000 - - - - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
60. fam219ab ENSDARG00000013813 591 1 - 1.000 - - - - - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
61. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
62. KLHL38 KLHL38 15 1 1.000 - - - - - - - -
63. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
64. slc34a1b ENSDARG00000054658 1 1 - - - - 1.000 - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
65. gfra3 ENSDARG00000087704 122 1 - 1.000 - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
66. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
67. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
68. si:dkey-220a11.9 si:dkey-220a11.9 10 1 - 1.000 - - - - - - -
69. CLSTN2 ENSDARG00000060637 41 1 - 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
70. GSTK1_2 GSTK1_2 8 1 - - - - - - 1.000 - -
71. ascc2 ENSDARG00000013058 228 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
72. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - - - 1.000 - - - -
73. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1 - 1.000 - - - - - - - retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
74. KCNG2 ENSDARG00000035961 58 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
75. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 1.000 - - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
76. baiap2l1b ENSDARG00000031119 71 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
77. C20H1orf95 C20H1orf95 12 1 - - - - - - 1.000 - -
78. BX537305.1 ENSDARG00000113834 10 1 - 1.000 - - - - - - -
79. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
80. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
81. BX004964.2 BX004964.2 1 1 - 1.000 - - - - - - -
82. lingo1b ENSDARG00000035899 86 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
83. CU694385.1 CU694385.1 1 1 1.000 - - - - - - - -
84. cs_1 ENSDARG00000103364 2 1 - - - - - - 1.000 - - citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
85. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
86. htr3a ENSDARG00000089212 51 1 - 1.000 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
87. si:dkey-26g8.9 si:dkey-26g8.9 2 1 1.000 - - - - - - - -
88. taar19o ENSDARG00000093266, ENSDARG00000116999 1 1 - - - - - - 1.000 - - trace amine associated receptor 19o [Source:ZFIN;Acc:ZDB-GENE-060414-13]
89. si:dkey-93h22.6 si:dkey-93h22.6 7 1 - 1.000 - - - - - - -
90. C5AR1 1 1 - - - - 1.000 - - - - C5a anaphylatoxin chemotactic receptor
91. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - 1.000 - - - - - - -
92. BX469910.2 ENSDARG00000096127 6 1 - - - - - - 1.000 - -
93. si:ch211-121j5.4 ENSDARG00000097160 0 1 - - - - 1.000 - - - - si:ch211-121j5.4 [Source:ZFIN;Acc:ZDB-GENE-070912-29]
94. si:dkey-285e18.6 ENSDARG00000098144 1 1 - 1.000 - - - - - - - si:dkey-285e18.6 [Source:ZFIN;Acc:ZDB-GENE-120709-86]
95. irx4b ENSDARG00000036051 54 1 - - - - - - 1.000 - - iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
96. ENSDARG00000095511 ENSDARG00000095511 0 1 - - - - 1.000 - - - -
97. GLB1L2 ENSDARG00000034941 74 1 1.000 - - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
98. ccdc14 ENSDARG00000098734 3 1 - 1.000 - - - - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
99. SNORA31 SNORA31 23 1 - - - - - - 1.000 - -
100. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -

There are 985 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA