Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ciita

Gene Name Gene ID Reads Annotation
ciita ENSDARG00000090851 5 class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]










Genes with expression patterns similar to ciita

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ciita ENSDARG00000090851 5 7 1.000 - - 1.000 1.000 1.000 1.000 1.000 1.000 class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
2. ssh1b ENSDARG00000010031 4 2 1.000 - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
3. si:dkey-217m5.3 si:dkey-217m5.3 22 2 1.000 - - - - 1.000 - - -
4. SOX8 SOX8 22 2 1.000 - - - - 1.000 - - -
5. btr22 ENSDARG00000100539 137 2 - - - - 1.000 - 1.000 - - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
6. si:dkey-78a14.5 14 2 - - - - 1.000 - 1.000 - - si:dkey-78a14.5, transcript variant X2
7. si:dkey-189d19.1 si:dkey-189d19.1 2 2 1.000 - - - 1.000 - - - -
8. ovca2 ENSDARG00000103748 38 2 1.000 - - - - - 1.000 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
9. CU896555.1 CU896555.1 27 2 - - - - - 1.000 1.000 - -
10. zgc:173652_1 4 2 - - - - - 1.000 - - 1.000 zgc:173652
11. FAM177A1 ENSDARG00000079636 19 1.963 1.000 - - - - - 0.963 - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
12. fermt3a fermt3a 56 1.962 1.000 - - - - - 0.962 - -
13. ccr12.2 ccr12.2 2 1.96 - - - - 0.960 - - 1.000 -
14. CU984579.1 ENSDARG00000116863 15 1.956 1.000 - - - - 0.956 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
15. sts ENSDARG00000053241 10 1.917 - - - - - - 1.000 - 0.917 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
16. gcdhl gcdhl 38 1.916 - - - 1.000 - - 0.916 - -
17. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1.912 - - - - 0.912 - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
18. CABZ01080492.1 CABZ01080492.1 495 1.908 1.000 - - - - - 0.908 - -
19. si:zfos-979f1.2 ENSDARG00000011652 24 1.877 1.000 - - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
20. sycp1 ENSDARG00000003904 8 1.877 1.000 - - - - 0.877 - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
21. CT573468.1 CT573468.1 283 1.875 - - - - - - 0.958 - 0.917
22. ddit4 ENSDARG00000037618 37 1.873 - - - - - 1.000 0.873 - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
23. ZSWIM2 ENSDARG00000075700 8 1.869 - - - - - 1.000 - 0.869 - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
24. si:ch211-13o20.1 si:ch211-13o20.1 30 1.85 1.000 - - - - - 0.850 - -
25. cpeb1a ENSDARG00000045932 81 1.85 0.915 - - - - - 0.935 - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
26. GPR180 73 1.845 - - - - - 1.000 0.845 - - G protein-coupled receptor 180, transcript variant X2
27. si:dkey-201i6.5 si:dkey-201i6.5 3 1.84 - - - - 0.840 - 1.000 - -
28. RNF14 ENSDARG00000043905 41 1.838 1.000 - - - - - 0.838 - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
29. CDH7 16 1.83 - - - - 0.953 0.877 - - - cadherin 7, type 2, transcript variant X1
30. si:dkey-14d8.2 38 1.827 - - - - - - 0.910 - 0.917 si:dkey-14d8.2
31. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.822 0.915 - - - - 0.907 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
32. si:ch73-381a20.2 si:ch73-381a20.2 11 1.816 - - - - 0.864 - 0.952 - -
33. serpine3 ENSDARG00000057108 49 1.777 0.825 - - - - - 0.952 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
34. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1.765 - - - - - - 1.000 - 0.765 sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
35. grid1b ENSDARG00000044161 20 1.762 - - - - 0.762 - 1.000 - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
36. slc7a10b ENSDARG00000051730 44 1.76 - - - 0.814 - - 0.946 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
37. BX511189.1 BX511189.1 34 1.746 0.746 - - - - - 1.000 - -
38. GAS2_1 GAS2_1 16 1.746 - - - 1.000 - 0.746 - - -
39. rft1 ENSDARG00000060398 146 1.745 - - - - - 0.787 0.958 - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
40. dcbld1 ENSDARG00000015907 36 1.739 - - - - - 0.739 1.000 - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
41. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1.736 1.000 - - - - - - - 0.736
42. klf6b ENSDARG00000038561 27 1.733 1.000 - - - - - 0.733 - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
43. calcr ENSDARG00000028845, ENSDARG00000109526 17 1.724 - - - - - 0.724 1.000 - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
44. gpat2 ENSDARG00000053575 12 1.722 - - - 1.000 - - 0.722 - - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
45. isg20l2 ENSDARG00000102266 167 1.675 - - - - - 0.747 0.928 - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
46. mgat4a ENSDARG00000063330 3 1.663 0.746 - - - - - - - 0.917 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
47. BX664622.1 ENSDARG00000101754 39 1.659 - - - - - - 0.742 - 0.917
48. si:ch211-93g23.2 ENSDARG00000070558 105 1.65 0.705 - - - - - 0.945 - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
49. CABZ01071911.2 CABZ01071911.2 64 1.643 - - - - - 0.722 0.921 - -
50. TP53BP2 TP53BP2 217 1.627 - - - - - 0.814 0.813 - -
51. si:dkey-14o6.7 si:dkey-14o6.7 9 1.591 - - - - 0.855 - - - 0.736
52. CR450814.1 ENSDARG00000096835 137 1.572 0.739 - - - - - 0.833 - -
53. SLC47A1_2 SLC47A1_2 50 1.544 - - - - 0.738 - 0.806 - -
54. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.429 - - - - - 0.725 0.704 - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
55. CD97_2 CD97_2 15 1 - - - 1.000 - - - - -
56. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - - - - - 1.000 - -
57. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
58. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 1.000 - - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
59. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
60. sult2st3 ENSDARG00000028367 79 1 1.000 - - - - - - - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
61. ucp3 ENSDARG00000091209 137 1 1.000 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
62. CLDND1_1 CLDND1_1 50 1 - - - - - - 1.000 - -
63. tob1a ENSDARG00000032619 3 1 1.000 - - - - - - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
64. ftr26 ENSDARG00000092961 1 1 - - - - - - - 1.000 - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
65. pde5ab ENSDARG00000051915 18 1 - - - - - 1.000 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
66. smarcd3b ENSDARG00000019969 11 1 - - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
67. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
68. bmpr2b ENSDARG00000020057 8 1 1.000 - - - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
69. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
70. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
71. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
72. ctsa ENSDARG00000098114 2 1 - - - - - - - 1.000 - cathepsin A [Source:ZFIN;Acc:ZDB-GENE-030131-537]
73. PLEKHS1_2 PLEKHS1_2 21 1 - - - - 1.000 - - - -
74. RAB1B RAB1B 20 1 - - - - - 1.000 - - -
75. si:ch211-188c16.1 ENSDARG00000077288 16 1 - - - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
76. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
77. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
78. MDH1B ENSDARG00000018008 29 1 - - - - - 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
79. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
80. ETS1 ENSDARG00000024431 6 1 1.000 - - - - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
81. BX539307.1 ENSDARG00000071588 2 1 - - - 1.000 - - - - -
82. CR854899.1 ENSDARG00000102357 8 1 - - - - - - 1.000 - -
83. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
84. ttc25 ENSDARG00000058140 2 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
85. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
86. si:dkey-57c22.1 ENSDARG00000093846 12 1 - - - 1.000 - - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
87. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
88. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
89. PSMB11_1 PSMB11_1 2 1 - - - - - 1.000 - - -
90. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - - - - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
91. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
92. FILIP1L_1 FILIP1L_1 1 1 - - - 1.000 - - - - -
93. si:dkey-199m13.6 si:dkey-199m13.6 53 1 1.000 - - - - - - - -
94. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - - 1.000 - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
95. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 1.000 - - - - - - - -
96. TGFBR2 TGFBR2 2 1 - - - - 1.000 - - - -
97. GPR114 GPR114 1 1 - - - - - - 1.000 - -
98. si:dkey-258p11.3 si:dkey-258p11.3 9 1 - - - - - - 1.000 - -
99. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1 1.000 - - - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
100. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - - - 1.000 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]

There are 1196 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA