Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sod3b

Gene Name Gene ID Reads Annotation
sod3b ENSDARG00000079183 39 superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]










Genes with expression patterns similar to sod3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sod3b ENSDARG00000079183 39 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
2. bag5 ENSDARG00000017316 195 3.177 0.735 0.778 - - - 0.957 - - 0.707 BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
3. tmem39a ENSDARG00000102746 900 2.112 - 0.704 - - - 0.705 0.703 - - transmembrane protein 39A [Source:ZFIN;Acc:ZDB-GENE-030131-1928]
4. TMEM260 ENSDARG00000076362 63 2 1.000 - - - - - 1.000 - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
5. si:dkeyp-59c12.1 ENSDARG00000038112 186 1.992 1.000 - - - - 0.992 - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
6. cyp19a1b ENSDARG00000098360 8 1.989 1.000 - - - - 0.989 - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
7. B3GNT2_1 B3GNT2_1 380 1.927 - 0.974 - - - 0.953 - - -
8. cfhl5 ENSDARG00000105052 25 1.903 1.000 - - - - 0.903 - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
9. vipr1b ENSDARG00000059058 62 1.892 1.000 0.892 - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
10. grhl2a ENSDARG00000058342 153 1.876 - 0.908 - - - 0.968 - - - grainyhead-like transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-050913-123]
11. irgq2 ENSDARG00000068657 4 1.863 1.000 - - - - - 0.863 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
12. zp2.5 ENSDARG00000086522 15 1.863 1.000 - - - - - 0.863 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
13. si:ch211-234c11.3_1 ENSDARG00000093615 10 1.863 1.000 - - - - - 0.863 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
14. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1.863 1.000 - - - - - 0.863 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
15. tbx5b ENSDARG00000092060 37 1.863 1.000 - - - - - 0.863 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
16. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.859 1.000 - - - - - - - 0.859 methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
17. bmp6 ENSDARG00000015686 211 1.838 - - - - - 0.955 0.883 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
18. cdc73 ENSDARG00000020201 22 1.834 1.000 - - - 0.834 - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
19. sult2st3 ENSDARG00000028367 79 1.828 1.000 - - - - - 0.828 - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
20. SLC37A3 176 1.81 - - - - - 0.923 0.887 - - solute carrier family 37 member 3, transcript variant X4
21. FAM150A 14 1.805 1.000 - - - 0.805 - - - - family with sequence similarity 150 member A, transcript variant X2
22. MAP3K13 ENSDARG00000009493 8 1.792 1.000 0.792 - - - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
23. PLCG2 ENSDARG00000068763 11 1.792 1.000 0.792 - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
24. plcd3b ENSDARG00000079572 64 1.786 - - - - - 0.964 - - 0.822 phospholipase C, delta 3b [Source:ZFIN;Acc:ZDB-GENE-081222-2]
25. aasdh ENSDARG00000022730 13 1.758 - - - - 0.929 - - - 0.829 aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
26. zgc:173443 ENSDARG00000034403 26 1.756 - - - - - - 0.863 - 0.893 zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
27. si:ch211-194e1.8 si:ch211-194e1.8 14 1.749 1.000 0.749 - - - - - - -
28. ddx26b 79 1.743 1.000 - - - - - 0.743 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
29. irg1l ENSDARG00000062788 503 1.736 - 0.762 - - - 0.974 - - - immunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
30. nanog ENSDARG00000075113 10 1.731 - - - - 0.868 - 0.863 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
31. si:dkey-50i6.5 ENSDARG00000101320 95 1.727 - 0.764 - - - 0.963 - - - si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53]
32. znf668 ENSDARG00000025226, ENSDARG00000112533 177 1.725 - 0.767 - - - 0.958 - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
33. usp20 ENSDARG00000027501, ENSDARG00000116822 211 1.724 - - - - - 0.871 0.853 - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
34. rabggta ENSDARG00000061024 332 1.719 - - - - - 0.786 0.933 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
35. paqr7a ENSDARG00000100462 15 1.717 - 0.775 - - - - 0.942 - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
36. KCNK2 KCNK2 89 1.708 - - - - - 0.892 0.816 - -
37. CR854923.1 CR854923.1 18 1.7 - - - - 0.880 - 0.820 - -
38. fam86a fam86a 174 1.695 - 0.792 - - - 0.903 - - -
39. ubxn7 ENSDARG00000009436 652 1.678 - - - - - 0.902 0.776 - - UBX domain protein 7 [Source:ZFIN;Acc:ZDB-GENE-040704-8]
40. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 1.669 - - - - - - 0.922 - 0.747 toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
41. si:dkey-3h3.3 ENSDARG00000067718 225 1.662 - - - - - 0.933 - - 0.729 si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
42. si:ch211-152p11.8 46 1.662 - - - - - - 0.922 0.740 - si:ch211-152p11.8, transcript variant X2
43. tctn1 ENSDARG00000078447 330 1.662 - 0.783 - - - 0.879 - - - tectonic family member 1 [Source:ZFIN;Acc:ZDB-GENE-081104-157]
44. sfi1 ENSDARG00000053992 1075 1.661 - 0.709 - - - 0.952 - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
45. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1.655 - 0.792 - - - - 0.863 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
46. st6galnac ENSDARG00000086292 29 1.655 - 0.792 - - - - 0.863 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
47. F7 ENSDARG00000034862 121 1.644 - - - - - 0.848 0.796 - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
48. si:dkey-211g8.6 ENSDARG00000063088 19 1.637 - 0.792 - - - - - 0.845 - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
49. CCDC57_1 CCDC57_1 35 1.633 - 0.911 0.722 - - - - - -
50. SLC4A7 ENSDARG00000073952 474 1.632 - - - - - 0.884 0.748 - - solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:ZFIN;Acc:ZDB-GENE-140106-104]
51. zgc:162358 zgc:162358 104 1.625 - - - - - 0.873 0.752 - -
52. CU855711.1 ENSDARG00000088643 6 1.623 - - - - - - 0.863 0.760 - legumain-like [Source:NCBI gene;Acc:108191752]
53. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.616 - 0.792 - - - - - 0.824 - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
54. CYP46A1 CYP46A1 16 1.615 - 0.792 - - - - - - 0.823
55. si:dkey-10p5.7 26 1.61 - 0.727 - - - - 0.883 - - si:dkey-10p5.7
56. tnip1 ENSDARG00000015653 94 1.586 - 0.709 - - - 0.877 - - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
57. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 1.585 - 0.716 - - - 0.869 - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
58. grin2ca ENSDARG00000078149 13 1.585 - - - - - - - 0.724 0.861 glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
59. eml3 ENSDARG00000058038 449 1.584 - - - - - 0.716 0.868 - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
60. si:ch211-229n2.7 ENSDARG00000094088 410 1.578 - 0.740 - - - - - - 0.838 si:ch211-229n2.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8579]
61. SEMA6B SEMA6B 35 1.575 - - - 0.712 - - 0.863 - -
62. ARSJ ENSDARG00000077590 684 1.571 - 0.743 - - - - 0.828 - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
63. CABZ01012857.1 CABZ01012857.1 78 1.569 - 0.728 - - 0.841 - - - -
64. C25H12orf5 C25H12orf5 65 1.567 - 0.769 - - - - 0.798 - -
65. PAQR8 ENSDARG00000088828 26 1.566 - 0.792 - - - - 0.774 - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
66. OMG OMG 1202 1.561 - - - - 0.749 0.812 - - -
67. pou5f3 ENSDARG00000044774 212 1.559 - 0.725 - - - - - - 0.834 POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
68. CU596012.1 CU596012.1 24 1.548 - 0.792 - - - - 0.756 - -
69. cbln13 ENSDARG00000026904, ENSDARG00000114505 93 1.538 - - - - - 0.808 - 0.730 - cerebellin 13 [Source:ZFIN;Acc:ZDB-GENE-070912-288]
70. arhgap17b ENSDARG00000062263 55 1.531 - - - - - - 0.744 - 0.787 Rho GTPase activating protein 17b [Source:ZFIN;Acc:ZDB-GENE-080220-26]
71. C8H1orf222 C8H1orf222 36 1.527 - 0.769 - - - - 0.758 - -
72. cradd ENSDARG00000028192 153 1.526 - - - - 0.768 - - - 0.758 CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
73. BX957278.1 ENSDARG00000010940 317 1.503 0.729 - - - - - - - 0.774
74. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.496 - - - - - - 0.771 - 0.725 si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
75. ntf7 ntf7 72 1.487 - 0.768 - - - - 0.719 - -
76. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.479 - 0.710 - - - 0.769 - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
77. cyb5r4 ENSDARG00000020898 119 1.478 - 0.763 - - - - - - 0.715 cytochrome b5 reductase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-225]
78. ehhadh ENSDARG00000070029 88 1.474 - 0.735 - - 0.739 - - - - enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2581]
79. hsd17b4 ENSDARG00000101239 301 1.473 - 0.755 - - - - - - 0.718 hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
80. si:ch211-241j12.3 ENSDARG00000043963 128 1.466 - 0.727 - - - - - - 0.739 si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
81. ANKRD34A 22 1.46 0.746 - - 0.714 - - - - - ankyrin repeat domain 34A, transcript variant X2
82. gbgt1l1 ENSDARG00000025275 21 1.459 - 0.711 - - - - 0.748 - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1117]
83. gdf6a ENSDARG00000053479 121 1.454 - - - - - - 0.708 - 0.746 growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
84. stk36 ENSDARG00000061095 113 1.442 - 0.715 - - - - - - 0.727 serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
85. CABZ01069081.1 CABZ01069081.1 16 1 1.000 - - - - - - - -
86. TAF4_1 TAF4_1 30 1 1.000 - - - - - - - -
87. hoxc9a ENSDARG00000092809 18 1 1.000 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
88. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
89. wu:fy63c09 1 1 1.000 - - - - - - - - wu:fy63c09
90. CU984579.1 ENSDARG00000116863 15 1 1.000 - - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
91. or115-14 ENSDARG00000094235 17 1 1.000 - - - - - - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
92. TGFBR3L TGFBR3L 16 1 1.000 - - - - - - - -
93. CT027800.1 CT027800.1 36 1 1.000 - - - - - - - -
94. upp1 ENSDARG00000040869 2 1 1.000 - - - - - - - - uridine phosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-2]
95. RNF14 ENSDARG00000043905 41 1 1.000 - - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
96. si:ch211-160d14.9 8 1 1.000 - - - - - - - - si:ch211-160d14.9, transcript variant X1
97. si:dkey-47k16.3 si:dkey-47k16.3 17 1 1.000 - - - - - - - -
98. PARM1 ENSDARG00000114063 58 1 1.000 - - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
99. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 1.000 - - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
100. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]

There are 1608 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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