Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for NIPBL

Gene Name Gene ID Reads Annotation
NIPBL ENSG00000164190 4262 NIPBL, cohesin loading factor [Source:HGNC Symbol;Acc:HGNC:28862]



Genes with expression patterns similar to NIPBL

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. NIPBL ENSG00000164190 4262 2 1.000 1.000 NIPBL, cohesin loading factor [Source:HGNC Symbol;Acc:HGNC:28862]
2. RB1CC1 ENSG00000023287 3626 0.838 - 0.838 RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
3. ZNF292 ENSG00000188994 11216 0.837 - 0.837 zinc finger protein 292 [Source:HGNC Symbol;Acc:HGNC:18410]
4. USP16 ENSG00000156256 3161 0.827 - 0.827 ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]
5. ROCK1 ENSG00000067900 3375 0.818 - 0.818 Rho associated coiled-coil containing protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:10251]
6. TBL1XR1 ENSG00000177565 10246 0.817 - 0.817 transducin beta like 1 X-linked receptor 1 [Source:HGNC Symbol;Acc:HGNC:29529]
7. CEP290 ENSG00000198707 1212 0.813 - 0.813 centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
8. UBE3A ENSG00000114062 9252 0.805 - 0.805 ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
9. CCDC88A ENSG00000115355 6649 0.8 - 0.800 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
10. ANKRD12 ENSG00000101745 7317 0.796 - 0.796 ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
11. PHIP ENSG00000146247 9731 0.795 - 0.795 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
12. E2F3 ENSG00000112242 3842 0.794 - 0.794 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
13. MED13L ENSG00000123066 3218 0.794 - 0.794 mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
14. ANKRD26 ENSG00000107890 2534 0.791 - 0.791 ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:29186]
15. ENAH ENSG00000154380 34591 0.788 - 0.788 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
16. SMC2 ENSG00000136824 5127 0.787 - 0.787 structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]
17. ZFR ENSG00000056097 6491 0.785 - 0.785 zinc finger RNA binding protein [Source:HGNC Symbol;Acc:HGNC:17277]
18. AKAP9 ENSG00000127914 5166 0.785 - 0.785 A-kinase anchoring protein 9 [Source:HGNC Symbol;Acc:HGNC:379]
19. KIF5B ENSG00000170759 16732 0.784 - 0.784 kinesin family member 5B [Source:HGNC Symbol;Acc:HGNC:6324]
20. ARID2 ENSG00000189079 7763 0.781 - 0.781 AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
21. SMC4 ENSG00000113810 14567 0.781 - 0.781 structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]
22. SRSF11 ENSG00000116754 17402 0.78 - 0.780 serine and arginine rich splicing factor 11 [Source:HGNC Symbol;Acc:HGNC:10782]
23. CENPE ENSG00000138778 4793 0.779 - 0.779 centromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]
24. ATRX ENSG00000085224 27422 0.777 - 0.777 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
25. RSF1 ENSG00000048649 2070 0.775 - 0.775 remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:HGNC:18118]
26. BPTF ENSG00000171634 9128 0.773 - 0.773 bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
27. RAD21 ENSG00000164754 25784 0.771 - 0.771 RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]
28. CEBPZ ENSG00000115816 4024 0.77 - 0.770 CCAAT enhancer binding protein zeta [Source:HGNC Symbol;Acc:HGNC:24218]
29. PRKG1 ENSG00000185532 1634 0.77 - 0.770 protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
30. ZNF644 ENSG00000122482 3186 0.769 - 0.769 zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
31. YAP1 ENSG00000137693 18875 0.767 - 0.767 Yes associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16262]
32. PAPD5 3995 0.766 - 0.766 PAP associated domain containing 5, transcript variant X4
33. ZFHX4 ENSG00000091656 12505 0.766 - 0.766 zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
34. ARRDC3 ENSG00000113369 19152 0.763 - 0.763 arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]
35. NUDT21 ENSG00000167005 13881 0.763 - 0.763 nudix hydrolase 21 [Source:HGNC Symbol;Acc:HGNC:13870]
36. YTHDF3 ENSG00000185728 6048 0.761 - 0.761 YTH N6-methyladenosine RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:26465]
37. TNRC6B ENSG00000100354 7721 0.76 - 0.760 trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:HGNC:29190]
38. RAD50 ENSG00000113522 3743 0.76 - 0.760 RAD50 double strand break repair protein [Source:HGNC Symbol;Acc:HGNC:9816]
39. SLC38A2 ENSG00000134294 18805 0.759 - 0.759 solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]
40. KRR1 ENSG00000111615 954 0.759 - 0.759 KRR1, small subunit processome component homolog [Source:HGNC Symbol;Acc:HGNC:5176]
41. DEK ENSG00000124795 7266 0.759 - 0.759 DEK proto-oncogene [Source:HGNC Symbol;Acc:HGNC:2768]
42. MED13 ENSG00000108510 4518 0.758 - 0.758 mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
43. SOS1 ENSG00000115904 4912 0.757 - 0.757 SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
44. GCC2 ENSG00000135968 2012 0.757 - 0.757 GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
45. DCP2 ENSG00000172795 5680 0.756 - 0.756 decapping mRNA 2 [Source:HGNC Symbol;Acc:HGNC:24452]
46. ASPM ENSG00000066279 7430 0.755 - 0.755 abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
47. PRPF40A ENSG00000196504 9481 0.755 - 0.755 pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
48. TPR ENSG00000047410 2737 0.755 - 0.755 translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
49. RIF1 ENSG00000080345 7757 0.754 - 0.754 replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
50. PWWP2A ENSG00000170234 4093 0.753 - 0.753 PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
51. MAP9 ENSG00000164114 2246 0.752 - 0.752 microtubule associated protein 9 [Source:HGNC Symbol;Acc:HGNC:26118]
52. GNA13 ENSG00000120063 5010 0.752 - 0.752 G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
53. WDFY1 ENSG00000085449 3401 0.752 - 0.752 WD repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20451]
54. SREK1IP1 ENSG00000153006 5833 0.75 - 0.750 SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
55. SUZ12 ENSG00000178691 6660 0.75 - 0.750 SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
56. EIF3E ENSG00000104408 18921 0.75 - 0.750 eukaryotic translation initiation factor 3 subunit E [Source:HGNC Symbol;Acc:HGNC:3277]
57. SCAMP1 ENSG00000085365 3749 0.748 - 0.748 secretory carrier membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:10563]
58. MATR3 ENSG00000015479, ENSG00000280987 35194 0.746 - 0.746 matrin 3 [Source:NCBI gene;Acc:9782]
59. ZBTB44 ENSG00000196323 6946 0.746 - 0.746 zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
60. CUL5 ENSG00000166266 3777 0.745 - 0.745 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
61. PTEN ENSG00000171862, ENSG00000284792 8446 0.743 - 0.743 phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
62. KIAA2026 ENSG00000183354 6074 0.741 - 0.741 KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
63. EXOC5 ENSG00000070367 4895 0.741 - 0.741 exocyst complex component 5 [Source:HGNC Symbol;Acc:HGNC:10696]
64. ZNF708 ENSG00000182141 2284 0.74 - 0.740 zinc finger protein 708 [Source:HGNC Symbol;Acc:HGNC:12945]
65. CADM1 ENSG00000182985 19971 0.74 - 0.740 cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
66. APC ENSG00000134982 2740 0.738 - 0.738 APC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:583]
67. HMGN5 ENSG00000198157 4384 0.738 - 0.738 high mobility group nucleosome binding domain 5 [Source:HGNC Symbol;Acc:HGNC:8013]
68. TMTC3 ENSG00000139324 2355 0.738 - 0.738 transmembrane and tetratricopeptide repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:26899]
69. ZNF518A ENSG00000177853 2730 0.738 - 0.738 zinc finger protein 518A [Source:HGNC Symbol;Acc:HGNC:29009]
70. KPNA3 ENSG00000102753 4370 0.737 - 0.737 karyopherin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6396]
71. UBR3 ENSG00000144357 3172 0.737 - 0.737 ubiquitin protein ligase E3 component n-recognin 3 [Source:HGNC Symbol;Acc:HGNC:30467]
72. RSL24D1 ENSG00000137876 11920 0.737 - 0.737 ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18479]
73. DNAJB14 ENSG00000164031 2586 0.736 - 0.736 DnaJ heat shock protein family (Hsp40) member B14 [Source:HGNC Symbol;Acc:HGNC:25881]
74. ESF1 ENSG00000089048 5635 0.736 - 0.736 ESF1 nucleolar pre-rRNA processing protein homolog [Source:HGNC Symbol;Acc:HGNC:15898]
75. SOCS6 ENSG00000170677 2759 0.735 - 0.735 suppressor of cytokine signaling 6 [Source:HGNC Symbol;Acc:HGNC:16833]
76. TCF4 ENSG00000196628 15567 0.735 - 0.735 transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:11634]
77. SP4 ENSG00000105866 1836 0.735 - 0.735 Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
78. RBBP6 ENSG00000122257 7686 0.734 - 0.734 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
79. DYRK2 ENSG00000127334 3808 0.733 - 0.733 dual specificity tyrosine phosphorylation regulated kinase 2 [Source:HGNC Symbol;Acc:HGNC:3093]
80. EPC1 ENSG00000120616 7342 0.733 - 0.733 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
81. JMJD1C ENSG00000171988 1966 0.733 - 0.733 jumonji domain containing 1C [Source:HGNC Symbol;Acc:HGNC:12313]
82. SENP6 ENSG00000112701 6072 0.732 - 0.732 SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
83. ZMYM2 ENSG00000121741 4271 0.732 - 0.732 zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]
84. QSER1 ENSG00000060749 5965 0.732 - 0.732 glutamine and serine rich 1 [Source:HGNC Symbol;Acc:HGNC:26154]
85. KMT2E ENSG00000005483 4281 0.732 - 0.732 lysine methyltransferase 2E [Source:HGNC Symbol;Acc:HGNC:18541]
86. DYNC2H1 ENSG00000187240 2861 0.731 - 0.731 dynein cytoplasmic 2 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2962]
87. AZIN1 ENSG00000155096 7504 0.73 - 0.730 antizyme inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:16432]
88. PTPN12 ENSG00000127947 7897 0.729 - 0.729 protein tyrosine phosphatase, non-receptor type 12 [Source:HGNC Symbol;Acc:HGNC:9645]
89. EIF1AX ENSG00000173674 24992 0.729 - 0.729 eukaryotic translation initiation factor 1A X-linked [Source:HGNC Symbol;Acc:HGNC:3250]
90. ZNF148 ENSG00000163848 2766 0.728 - 0.728 zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
91. ZNF268 ENSG00000090612 2007 0.726 - 0.726 zinc finger protein 268 [Source:HGNC Symbol;Acc:HGNC:13061]
92. USP47 ENSG00000170242 5618 0.726 - 0.726 ubiquitin specific peptidase 47 [Source:HGNC Symbol;Acc:HGNC:20076]
93. CREB1 ENSG00000118260 6135 0.724 - 0.724 cAMP responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2345]
94. ADD3 ENSG00000148700 7732 0.724 - 0.724 adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
95. SUCO ENSG00000094975 6635 0.724 - 0.724 SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
96. ARID4A ENSG00000032219 2224 0.72 - 0.720 AT-rich interaction domain 4A [Source:HGNC Symbol;Acc:HGNC:9885]
97. OSBPL8 ENSG00000091039 3510 0.72 - 0.720 oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
98. CCAR1 ENSG00000060339 27115 0.72 - 0.720 cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
99. LRRCC1 ENSG00000133739 1324 0.719 - 0.719 leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
100. SMAD5 ENSG00000113658 5641 0.718 - 0.718 SMAD family member 5 [Source:HGNC Symbol;Acc:HGNC:6771]

There are 38 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA