Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP16

Gene Name Gene ID Reads Annotation
USP16 ENSG00000156256 3161 ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]



Genes with expression patterns similar to USP16

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. USP16 ENSG00000156256 3161 2 1.000 1.000 ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]
2. MED13 ENSG00000108510 4518 0.845 - 0.845 mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
3. NIPBL ENSG00000164190 4262 0.827 - 0.827 NIPBL, cohesin loading factor [Source:HGNC Symbol;Acc:HGNC:28862]
4. UBE3A ENSG00000114062 9252 0.827 - 0.827 ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
5. RB1CC1 ENSG00000023287 3626 0.82 - 0.820 RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
6. CEP290 ENSG00000198707 1212 0.802 - 0.802 centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
7. PRKG1 ENSG00000185532 1634 0.8 - 0.800 protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
8. PAPD5 3995 0.796 - 0.796 PAP associated domain containing 5, transcript variant X4
9. TBL1XR1 ENSG00000177565 10246 0.795 - 0.795 transducin beta like 1 X-linked receptor 1 [Source:HGNC Symbol;Acc:HGNC:29529]
10. CUL5 ENSG00000166266 3777 0.792 - 0.792 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
11. PHIP ENSG00000146247 9731 0.792 - 0.792 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
12. KPNA3 ENSG00000102753 4370 0.791 - 0.791 karyopherin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6396]
13. SLC38A2 ENSG00000134294 18805 0.791 - 0.791 solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]
14. RAD50 ENSG00000113522 3743 0.791 - 0.791 RAD50 double strand break repair protein [Source:HGNC Symbol;Acc:HGNC:9816]
15. ZNF292 ENSG00000188994 11216 0.789 - 0.789 zinc finger protein 292 [Source:HGNC Symbol;Acc:HGNC:18410]
16. DNAJB14 ENSG00000164031 2586 0.788 - 0.788 DnaJ heat shock protein family (Hsp40) member B14 [Source:HGNC Symbol;Acc:HGNC:25881]
17. AKAP9 ENSG00000127914 5166 0.788 - 0.788 A-kinase anchoring protein 9 [Source:HGNC Symbol;Acc:HGNC:379]
18. ZMYM2 ENSG00000121741 4271 0.783 - 0.783 zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]
19. ZFHX4 ENSG00000091656 12505 0.782 - 0.782 zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
20. MAP3K2 ENSG00000169967 2952 0.781 - 0.781 mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6854]
21. SMC2 ENSG00000136824 5127 0.781 - 0.781 structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]
22. CCDC88A ENSG00000115355 6649 0.776 - 0.776 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
23. YTHDF3 ENSG00000185728 6048 0.774 - 0.774 YTH N6-methyladenosine RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:26465]
24. CHD9 ENSG00000177200 17642 0.768 - 0.768 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
25. RAD21 ENSG00000164754 25784 0.767 - 0.767 RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]
26. SUZ12 ENSG00000178691 6660 0.767 - 0.767 SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
27. EIF3E ENSG00000104408 18921 0.767 - 0.767 eukaryotic translation initiation factor 3 subunit E [Source:HGNC Symbol;Acc:HGNC:3277]
28. ARRDC3 ENSG00000113369 19152 0.766 - 0.766 arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]
29. PPP1CB ENSG00000213639 14737 0.764 - 0.764 protein phosphatase 1 catalytic subunit beta [Source:HGNC Symbol;Acc:HGNC:9282]
30. ANKRD26 ENSG00000107890 2534 0.763 - 0.763 ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:29186]
31. ATRX ENSG00000085224 27422 0.763 - 0.763 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
32. PDCD10 ENSG00000114209 2421 0.761 - 0.761 programmed cell death 10 [Source:HGNC Symbol;Acc:HGNC:8761]
33. MKL2 18184 0.761 - 0.761 MKL1/myocardin like 2, transcript variant X15
34. ARID4A ENSG00000032219 2224 0.76 - 0.760 AT-rich interaction domain 4A [Source:HGNC Symbol;Acc:HGNC:9885]
35. KIAA1033 937 0.76 - 0.760 KIAA1033, transcript variant X6
36. ZBTB44 ENSG00000196323 6946 0.758 - 0.758 zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
37. DCP2 ENSG00000172795 5680 0.758 - 0.758 decapping mRNA 2 [Source:HGNC Symbol;Acc:HGNC:24452]
38. ANKRD12 ENSG00000101745 7317 0.756 - 0.756 ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
39. ZNF644 ENSG00000122482 3186 0.755 - 0.755 zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
40. SP3 ENSG00000172845 6798 0.755 - 0.755 Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]
41. SOCS6 ENSG00000170677 2759 0.755 - 0.755 suppressor of cytokine signaling 6 [Source:HGNC Symbol;Acc:HGNC:16833]
42. ROCK1 ENSG00000067900 3375 0.754 - 0.754 Rho associated coiled-coil containing protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:10251]
43. SPIN4 ENSG00000186767 2851 0.754 - 0.754 spindlin family member 4 [Source:HGNC Symbol;Acc:HGNC:27040]
44. MSH2 ENSG00000095002 4394 0.753 - 0.753 mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
45. KRCC1 ENSG00000172086 2251 0.752 - 0.752 lysine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:28039]
46. EXOC5 ENSG00000070367 4895 0.75 - 0.750 exocyst complex component 5 [Source:HGNC Symbol;Acc:HGNC:10696]
47. TMEM106B ENSG00000106460 4086 0.749 - 0.749 transmembrane protein 106B [Source:HGNC Symbol;Acc:HGNC:22407]
48. MAP3K1 ENSG00000095015 8341 0.748 - 0.748 mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
49. GCC2 ENSG00000135968 2012 0.747 - 0.747 GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
50. LIMS1 ENSG00000169756 4742 0.747 - 0.747 LIM zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:6616]
51. EPC1 ENSG00000120616 7342 0.745 - 0.745 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
52. USP47 ENSG00000170242 5618 0.745 - 0.745 ubiquitin specific peptidase 47 [Source:HGNC Symbol;Acc:HGNC:20076]
53. PCDH7 ENSG00000169851 5460 0.744 - 0.744 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
54. ARID2 ENSG00000189079 7763 0.744 - 0.744 AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
55. EIF1AX ENSG00000173674 24992 0.744 - 0.744 eukaryotic translation initiation factor 1A X-linked [Source:HGNC Symbol;Acc:HGNC:3250]
56. RSL24D1 ENSG00000137876 11920 0.744 - 0.744 ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18479]
57. TMTC3 ENSG00000139324 2355 0.743 - 0.743 transmembrane and tetratricopeptide repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:26899]
58. PPP2R5E ENSG00000154001 3818 0.742 - 0.742 protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
59. ADD3 ENSG00000148700 7732 0.742 - 0.742 adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
60. KIF5B ENSG00000170759 16732 0.742 - 0.742 kinesin family member 5B [Source:HGNC Symbol;Acc:HGNC:6324]
61. PCDH17 ENSG00000118946 3309 0.74 - 0.740 protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
62. PHF3 ENSG00000118482 2754 0.74 - 0.740 PHD finger protein 3 [Source:HGNC Symbol;Acc:HGNC:8921]
63. ESF1 ENSG00000089048 5635 0.738 - 0.738 ESF1 nucleolar pre-rRNA processing protein homolog [Source:HGNC Symbol;Acc:HGNC:15898]
64. CADM1 ENSG00000182985 19971 0.737 - 0.737 cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
65. STAG2 ENSG00000101972 5606 0.736 - 0.736 stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
66. AZIN1 ENSG00000155096 7504 0.736 - 0.736 antizyme inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:16432]
67. ZNF148 ENSG00000163848 2766 0.735 - 0.735 zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
68. N4BP2L2 ENSG00000244754 2544 0.734 - 0.734 NEDD4 binding protein 2 like 2 [Source:HGNC Symbol;Acc:HGNC:26916]
69. UBR3 ENSG00000144357 3172 0.734 - 0.734 ubiquitin protein ligase E3 component n-recognin 3 [Source:HGNC Symbol;Acc:HGNC:30467]
70. CCAR1 ENSG00000060339 27115 0.733 - 0.733 cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
71. AEBP2 ENSG00000139154 2971 0.733 - 0.733 AE binding protein 2 [Source:HGNC Symbol;Acc:HGNC:24051]
72. KIAA2026 ENSG00000183354 6074 0.732 - 0.732 KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
73. ATP2B1 ENSG00000070961 8805 0.731 - 0.731 ATPase plasma membrane Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:814]
74. SMC4 ENSG00000113810 14567 0.73 - 0.730 structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]
75. WDFY1 ENSG00000085449 3401 0.73 - 0.730 WD repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20451]
76. SRSF11 ENSG00000116754 17402 0.73 - 0.730 serine and arginine rich splicing factor 11 [Source:HGNC Symbol;Acc:HGNC:10782]
77. CETN3 ENSG00000153140 2027 0.729 - 0.729 centrin 3 [Source:HGNC Symbol;Acc:HGNC:1868]
78. THUMPD1 ENSG00000066654 4921 0.729 - 0.729 THUMP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23807]
79. KMT2C ENSG00000055609 2534 0.728 - 0.728 lysine methyltransferase 2C [Source:HGNC Symbol;Acc:HGNC:13726]
80. ZNF518A ENSG00000177853 2730 0.728 - 0.728 zinc finger protein 518A [Source:HGNC Symbol;Acc:HGNC:29009]
81. PRPF40A ENSG00000196504 9481 0.726 - 0.726 pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
82. ENAH ENSG00000154380 34591 0.726 - 0.726 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
83. RBBP6 ENSG00000122257 7686 0.726 - 0.726 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
84. COPB1 ENSG00000129083 7038 0.725 - 0.725 coatomer protein complex subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:2231]
85. FLRT3 ENSG00000125848 10097 0.724 - 0.724 fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
86. E2F3 ENSG00000112242 3842 0.724 - 0.724 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
87. PTEN ENSG00000171862, ENSG00000284792 8446 0.722 - 0.722 phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
88. TNRC6B ENSG00000100354 7721 0.722 - 0.722 trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:HGNC:29190]
89. RNF111 ENSG00000157450 1792 0.722 - 0.722 ring finger protein 111 [Source:HGNC Symbol;Acc:HGNC:17384]
90. ZNF217 ENSG00000171940 6009 0.722 - 0.722 zinc finger protein 217 [Source:HGNC Symbol;Acc:HGNC:13009]
91. CEBPZ ENSG00000115816 4024 0.722 - 0.722 CCAAT enhancer binding protein zeta [Source:HGNC Symbol;Acc:HGNC:24218]
92. YAP1 ENSG00000137693 18875 0.721 - 0.721 Yes associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16262]
93. PPIG ENSG00000138398 9384 0.721 - 0.721 peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
94. SREK1IP1 ENSG00000153006 5833 0.721 - 0.721 SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
95. CLOCK ENSG00000134852 6285 0.721 - 0.721 clock circadian regulator [Source:HGNC Symbol;Acc:HGNC:2082]
96. SUCO ENSG00000094975 6635 0.72 - 0.720 SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
97. ASPM ENSG00000066279 7430 0.719 - 0.719 abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
98. LRRCC1 ENSG00000133739 1324 0.716 - 0.716 leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
99. SMARCA5 ENSG00000153147 11058 0.716 - 0.716 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
100. MTF2 ENSG00000143033 11940 0.715 - 0.715 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:29535]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA