Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRPF40A

Gene Name Gene ID Reads Annotation
PRPF40A ENSG00000196504 9481 pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]



Genes with expression patterns similar to PRPF40A

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. PRPF40A ENSG00000196504 9481 2 1.000 1.000 pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
2. ATRX ENSG00000085224 27422 0.904 - 0.904 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
3. PHIP ENSG00000146247 9731 0.898 - 0.898 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
4. MAP9 ENSG00000164114 2246 0.881 - 0.881 microtubule associated protein 9 [Source:HGNC Symbol;Acc:HGNC:26118]
5. ROCK1 ENSG00000067900 3375 0.877 - 0.877 Rho associated coiled-coil containing protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:10251]
6. UBE3A ENSG00000114062 9252 0.874 - 0.874 ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
7. SMC4 ENSG00000113810 14567 0.872 - 0.872 structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]
8. SEC62 ENSG00000008952 15823 0.868 - 0.868 SEC62 homolog, preprotein translocation factor [Source:HGNC Symbol;Acc:HGNC:11846]
9. RAD50 ENSG00000113522 3743 0.866 - 0.866 RAD50 double strand break repair protein [Source:HGNC Symbol;Acc:HGNC:9816]
10. ZBTB44 ENSG00000196323 6946 0.864 - 0.864 zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
11. AKAP9 ENSG00000127914 5166 0.858 - 0.858 A-kinase anchoring protein 9 [Source:HGNC Symbol;Acc:HGNC:379]
12. CCDC88A ENSG00000115355 6649 0.857 - 0.857 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
13. CHD9 ENSG00000177200 17642 0.853 - 0.853 chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
14. AZIN1 ENSG00000155096 7504 0.85 - 0.850 antizyme inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:16432]
15. ENAH ENSG00000154380 34591 0.849 - 0.849 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
16. SUZ12 ENSG00000178691 6660 0.845 - 0.845 SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
17. ANKRD12 ENSG00000101745 7317 0.84 - 0.840 ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
18. ZMYM2 ENSG00000121741 4271 0.84 - 0.840 zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]
19. CCAR1 ENSG00000060339 27115 0.84 - 0.840 cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
20. RB1CC1 ENSG00000023287 3626 0.836 - 0.836 RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
21. TBL1XR1 ENSG00000177565 10246 0.834 - 0.834 transducin beta like 1 X-linked receptor 1 [Source:HGNC Symbol;Acc:HGNC:29529]
22. KIF5B ENSG00000170759 16732 0.834 - 0.834 kinesin family member 5B [Source:HGNC Symbol;Acc:HGNC:6324]
23. USP47 ENSG00000170242 5618 0.832 - 0.832 ubiquitin specific peptidase 47 [Source:HGNC Symbol;Acc:HGNC:20076]
24. CEBPZ ENSG00000115816 4024 0.832 - 0.832 CCAAT enhancer binding protein zeta [Source:HGNC Symbol;Acc:HGNC:24218]
25. ZNF644 ENSG00000122482 3186 0.829 - 0.829 zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
26. ARRDC3 ENSG00000113369 19152 0.828 - 0.828 arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]
27. GOLGA4 ENSG00000144674 3716 0.827 - 0.827 golgin A4 [Source:HGNC Symbol;Acc:HGNC:4427]
28. ZNF292 ENSG00000188994 11216 0.827 - 0.827 zinc finger protein 292 [Source:HGNC Symbol;Acc:HGNC:18410]
29. ARID1B ENSG00000049618 10812 0.825 - 0.825 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
30. PAPD5 3995 0.825 - 0.825 PAP associated domain containing 5, transcript variant X4
31. RBM27 ENSG00000091009 3201 0.82 - 0.820 RNA binding motif protein 27 [Source:HGNC Symbol;Acc:HGNC:29243]
32. CUL5 ENSG00000166266 3777 0.818 - 0.818 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
33. ESF1 ENSG00000089048 5635 0.817 - 0.817 ESF1 nucleolar pre-rRNA processing protein homolog [Source:HGNC Symbol;Acc:HGNC:15898]
34. SLC44A1 ENSG00000070214 5440 0.817 - 0.817 solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
35. SLC38A2 ENSG00000134294 18805 0.816 - 0.816 solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]
36. STAG2 ENSG00000101972 5606 0.815 - 0.815 stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
37. ZFHX4 ENSG00000091656 12505 0.815 - 0.815 zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
38. HSP90AA1 ENSG00000080824 45716 0.815 - 0.815 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
39. CWF19L2 ENSG00000152404 6226 0.815 - 0.815 CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
40. DCP2 ENSG00000172795 5680 0.813 - 0.813 decapping mRNA 2 [Source:HGNC Symbol;Acc:HGNC:24452]
41. PPM1A ENSG00000100614 8709 0.813 - 0.813 protein phosphatase, Mg2+/Mn2+ dependent 1A [Source:HGNC Symbol;Acc:HGNC:9275]
42. SP3 ENSG00000172845 6798 0.812 - 0.812 Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]
43. MED13 ENSG00000108510 4518 0.812 - 0.812 mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
44. PPP1CB ENSG00000213639 14737 0.811 - 0.811 protein phosphatase 1 catalytic subunit beta [Source:HGNC Symbol;Acc:HGNC:9282]
45. PPIG ENSG00000138398 9384 0.81 - 0.810 peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
46. CEP290 ENSG00000198707 1212 0.807 - 0.807 centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
47. BCLAF1 ENSG00000029363 16371 0.806 - 0.806 BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
48. TCF4 ENSG00000196628 15567 0.806 - 0.806 transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:11634]
49. CNTN4 ENSG00000144619 2198 0.806 - 0.806 contactin 4 [Source:HGNC Symbol;Acc:HGNC:2174]
50. PPP2R5E ENSG00000154001 3818 0.801 - 0.801 protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
51. RSL24D1 ENSG00000137876 11920 0.801 - 0.801 ribosomal L24 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18479]
52. RWDD1 ENSG00000111832 4883 0.8 - 0.800 RWD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20993]
53. ZNF708 ENSG00000182141 2284 0.797 - 0.797 zinc finger protein 708 [Source:HGNC Symbol;Acc:HGNC:12945]
54. XPO1 ENSG00000082898 12031 0.797 - 0.797 exportin 1 [Source:HGNC Symbol;Acc:HGNC:12825]
55. BPTF ENSG00000171634 9128 0.797 - 0.797 bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
56. SREK1IP1 ENSG00000153006 5833 0.796 - 0.796 SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
57. GCC2 ENSG00000135968 2012 0.795 - 0.795 GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
58. ZC3H15 ENSG00000065548 7991 0.794 - 0.794 zinc finger CCCH-type containing 15 [Source:HGNC Symbol;Acc:HGNC:29528]
59. YTHDF3 ENSG00000185728 6048 0.794 - 0.794 YTH N6-methyladenosine RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:26465]
60. RFX7 ENSG00000181827 5171 0.793 - 0.793 regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
61. SEC63 ENSG00000025796 6817 0.793 - 0.793 SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
62. ANKRD26 ENSG00000107890 2534 0.792 - 0.792 ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:29186]
63. KRCC1 ENSG00000172086 2251 0.792 - 0.792 lysine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:28039]
64. LRRCC1 ENSG00000133739 1324 0.79 - 0.790 leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
65. DICER1 ENSG00000100697 6501 0.79 - 0.790 dicer 1, ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17098]
66. RNF139 ENSG00000170881 2163 0.79 - 0.790 ring finger protein 139 [Source:HGNC Symbol;Acc:HGNC:17023]
67. PCDH7 ENSG00000169851 5460 0.789 - 0.789 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
68. BACH1 ENSG00000156273 2580 0.789 - 0.789 BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
69. SMC2 ENSG00000136824 5127 0.789 - 0.789 structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]
70. RAD21 ENSG00000164754 25784 0.788 - 0.788 RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]
71. RNF111 ENSG00000157450 1792 0.788 - 0.788 ring finger protein 111 [Source:HGNC Symbol;Acc:HGNC:17384]
72. E2F3 ENSG00000112242 3842 0.787 - 0.787 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
73. ARID4A ENSG00000032219 2224 0.786 - 0.786 AT-rich interaction domain 4A [Source:HGNC Symbol;Acc:HGNC:9885]
74. MTF2 ENSG00000143033 11940 0.785 - 0.785 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:29535]
75. ETNK1 ENSG00000139163 6151 0.784 - 0.784 ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
76. EIF3E ENSG00000104408 18921 0.783 - 0.783 eukaryotic translation initiation factor 3 subunit E [Source:HGNC Symbol;Acc:HGNC:3277]
77. SP4 ENSG00000105866 1836 0.783 - 0.783 Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
78. KMT2C ENSG00000055609 2534 0.782 - 0.782 lysine methyltransferase 2C [Source:HGNC Symbol;Acc:HGNC:13726]
79. MIER3 ENSG00000155545 1973 0.781 - 0.781 MIER family member 3 [Source:HGNC Symbol;Acc:HGNC:26678]
80. CLOCK ENSG00000134852 6285 0.78 - 0.780 clock circadian regulator [Source:HGNC Symbol;Acc:HGNC:2082]
81. ARL6IP1 ENSG00000170540 34877 0.78 - 0.780 ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:697]
82. LIMS1 ENSG00000169756 4742 0.779 - 0.779 LIM zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:6616]
83. MED13L ENSG00000123066 3218 0.778 - 0.778 mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
84. KPNA3 ENSG00000102753 4370 0.776 - 0.776 karyopherin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6396]
85. PDS5B ENSG00000083642 3994 0.776 - 0.776 PDS5 cohesin associated factor B [Source:HGNC Symbol;Acc:HGNC:20418]
86. MAP3K2 ENSG00000169967 2952 0.773 - 0.773 mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6854]
87. PTPN12 ENSG00000127947 7897 0.772 - 0.772 protein tyrosine phosphatase, non-receptor type 12 [Source:HGNC Symbol;Acc:HGNC:9645]
88. TAX1BP1 ENSG00000106052 11514 0.771 - 0.771 Tax1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11575]
89. DNAJB14 ENSG00000164031 2586 0.771 - 0.771 DnaJ heat shock protein family (Hsp40) member B14 [Source:HGNC Symbol;Acc:HGNC:25881]
90. KIAA2026 ENSG00000183354 6074 0.771 - 0.771 KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
91. CADM1 ENSG00000182985 19971 0.771 - 0.771 cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
92. HMGN5 ENSG00000198157 4384 0.77 - 0.770 high mobility group nucleosome binding domain 5 [Source:HGNC Symbol;Acc:HGNC:8013]
93. LARP7 ENSG00000174720 4968 0.769 - 0.769 La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
94. SPIN1 ENSG00000106723 7283 0.769 - 0.769 spindlin 1 [Source:HGNC Symbol;Acc:HGNC:11243]
95. CGGBP1 ENSG00000163320 8529 0.769 - 0.769 CGG triplet repeat binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1888]
96. SCAMP1 ENSG00000085365 3749 0.769 - 0.769 secretory carrier membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:10563]
97. ZNF281 ENSG00000162702 5443 0.769 - 0.769 zinc finger protein 281 [Source:HGNC Symbol;Acc:HGNC:13075]
98. IGF2BP3 ENSG00000136231 6580 0.768 - 0.768 insulin like growth factor 2 mRNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:28868]
99. ADD3 ENSG00000148700 7732 0.767 - 0.767 adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
100. TGFBR1 ENSG00000106799 9528 0.766 - 0.766 transforming growth factor beta receptor 1 [Source:HGNC Symbol;Acc:HGNC:11772]

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA