Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00643

Gene Name Gene ID Reads Annotation
LINC00643 ENSG00000186369 29 long intergenic non-protein coding RNA 643 [Source:HGNC Symbol;Acc:HGNC:44296]



Genes with expression patterns similar to LINC00643

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00643 ENSG00000186369 29 2 1.000 1.000 long intergenic non-protein coding RNA 643 [Source:HGNC Symbol;Acc:HGNC:44296]
2. LRRIQ3 ENSG00000162620 7 0.897 0.897 - leucine rich repeats and IQ motif containing 3 [Source:HGNC Symbol;Acc:HGNC:28318]
3. TMEM26-AS1 ENSG00000237233 2 0.847 0.847 - TMEM26 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51209]
4. MS4A3 ENSG00000149516 9 0.847 0.847 - membrane spanning 4-domains A3 [Source:HGNC Symbol;Acc:HGNC:7317]
5. SFTA2 ENSG00000196260, ENSG00000206465, ENSG00000224246, ENSG00000225454, ENSG00000230072, ENSG00000237814 6 0.847 0.847 - surfactant associated 2 [Source:HGNC Symbol;Acc:HGNC:18386]
6. GPX6 ENSG00000198704, ENSG00000281185 3 0.847 0.847 - glutathione peroxidase 6 [Source:NCBI gene;Acc:257202]
7. PRPF40B ENSG00000110844 10 0.847 0.847 - pre-mRNA processing factor 40 homolog B [Source:HGNC Symbol;Acc:HGNC:25031]
8. OR5K3 ENSG00000206536 2 0.847 0.847 - olfactory receptor family 5 subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:31290]
9. HLA-F ENSG00000137403, ENSG00000204642, ENSG00000206509, ENSG00000229698, ENSG00000234487, ENSG00000235220, ENSG00000237508 1 0.847 0.847 - major histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:HGNC:4963]
10. LOC645949 2 0.847 0.847 - uncharacterized LOC645949
11. CECR7 ENSG00000237438 3 0.847 0.847 - cat eye syndrome chromosome region, candidate 7 [Source:HGNC Symbol;Acc:HGNC:1845]
12. LOC101927082 1 0.847 0.847 - uncharacterized LOC101927082
13. C10orf120 ENSG00000183559 2 0.847 0.847 - chromosome 10 open reading frame 120 [Source:HGNC Symbol;Acc:HGNC:25707]
14. FOXA3 ENSG00000170608 24 0.847 0.847 - forkhead box A3 [Source:HGNC Symbol;Acc:HGNC:5023]
15. LINC01233 ENSG00000269364 4 0.847 0.847 - long intergenic non-protein coding RNA 1233 [Source:HGNC Symbol;Acc:HGNC:49756]
16. TMC1 ENSG00000165091 1 0.847 0.847 - transmembrane channel like 1 [Source:HGNC Symbol;Acc:HGNC:16513]
17. INHBC ENSG00000175189 2 0.847 0.847 - inhibin subunit beta C [Source:HGNC Symbol;Acc:HGNC:6068]
18. PROC ENSG00000115718 4 0.847 0.847 - protein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]
19. TEX11 ENSG00000120498 65 0.847 0.847 - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
20. CTAGE11P ENSG00000214249 8 0.847 0.847 - CTAGE family member 11, pseudogene [Source:HGNC Symbol;Acc:HGNC:37293]
21. FLJ34503 ENSG00000175967 4 0.847 0.847 - uncharacterized FLJ34503 [Source:NCBI gene;Acc:285759]
22. CHAT ENSG00000070748 1 0.847 0.847 - choline O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:1912]
23. TMED6 ENSG00000157315 9 0.847 0.847 - transmembrane p24 trafficking protein 6 [Source:HGNC Symbol;Acc:HGNC:28331]
24. ACP5 ENSG00000102575 16 0.847 0.847 - acid phosphatase 5, tartrate resistant [Source:HGNC Symbol;Acc:HGNC:124]
25. APOBEC3B ENSG00000179750 10 0.847 0.847 - apolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]
26. CNPY1 ENSG00000146910 2 0.847 0.847 - canopy FGF signaling regulator 1 [Source:HGNC Symbol;Acc:HGNC:27786]
27. C12orf54 ENSG00000177627 2 0.847 0.847 - chromosome 12 open reading frame 54 [Source:HGNC Symbol;Acc:HGNC:28553]
28. CASP1 ENSG00000137752 8 0.847 0.847 - caspase 1 [Source:HGNC Symbol;Acc:HGNC:1499]
29. TCL6 ENSG00000187621 1 0.847 0.847 - T cell leukemia/lymphoma 6 [Source:HGNC Symbol;Acc:HGNC:13463]
30. STAG3L5P-PVRIG2P-PILRB ENSG00000272752 6 0.847 0.847 - STAG3L5P-PVRIG2P-PILRB readthrough [Source:HGNC Symbol;Acc:HGNC:48898]
31. LINC01537 ENSG00000227467 5 0.847 0.847 - long intergenic non-protein coding RNA 1537 [Source:HGNC Symbol;Acc:HGNC:51301]
32. TTC16 ENSG00000167094 1 0.847 0.847 - tetratricopeptide repeat domain 16 [Source:HGNC Symbol;Acc:HGNC:26536]
33. ERICH5 ENSG00000177459 22 0.847 0.847 - glutamate rich 5 [Source:HGNC Symbol;Acc:HGNC:26823]
34. PTPRVP ENSG00000243323 1 0.847 0.847 - protein tyrosine phosphatase, receptor type V, pseudogene [Source:HGNC Symbol;Acc:HGNC:13421]
35. ST6GALNAC1 ENSG00000070526 15 0.847 0.847 - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23614]
36. TMEM207 ENSG00000198398 3 0.847 0.847 - transmembrane protein 207 [Source:HGNC Symbol;Acc:HGNC:33705]
37. PLA2G5 ENSG00000127472 2 0.847 0.847 - phospholipase A2 group V [Source:HGNC Symbol;Acc:HGNC:9038]
38. LSAMP-AS1 ENSG00000240922 2 0.847 0.847 - LSAMP antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40350]
39. NME8 ENSG00000086288 3 0.847 0.847 - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
40. LINC00612 ENSG00000214851 2 0.847 0.847 - long intergenic non-protein coding RNA 612 [Source:HGNC Symbol;Acc:HGNC:28621]
41. ANKRD20A11P ENSG00000215559 1 0.847 0.847 - ankyrin repeat domain 20 family member A11, pseudogene [Source:HGNC Symbol;Acc:HGNC:42024]
42. IL1RL1 ENSG00000115602 17 0.847 0.847 - interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]
43. ACPP ENSG00000014257 86 0.824 0.824 - acid phosphatase, prostate [Source:HGNC Symbol;Acc:HGNC:125]
44. NR1H4 ENSG00000012504 18 0.797 0.797 - nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]
45. KCNA4 ENSG00000182255 5 0.796 0.796 - potassium voltage-gated channel subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:6222]
46. BTNL3 ENSG00000168903 4 0.796 0.796 - butyrophilin like 3 [Source:HGNC Symbol;Acc:HGNC:1143]
47. TM4SF1-AS1 ENSG00000240541 5 0.791 0.791 - TM4SF1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40587]
48. UCMA ENSG00000165623 9 0.791 0.791 - upper zone of growth plate and cartilage matrix associated [Source:HGNC Symbol;Acc:HGNC:25205]
49. MCCD1 ENSG00000204511, ENSG00000206447, ENSG00000225228, ENSG00000226841, ENSG00000226923, ENSG00000228662, ENSG00000231975, ENSG00000238238 39 0.757 0.757 - mitochondrial coiled-coil domain 1 [Source:HGNC Symbol;Acc:HGNC:20668]
50. MFSD6L ENSG00000185156 10 0.73 0.730 - major facilitator superfamily domain containing 6 like [Source:HGNC Symbol;Acc:HGNC:26656]
51. HLA-DQB1 ENSG00000179344, ENSG00000206237, ENSG00000206302, ENSG00000225824, ENSG00000231286, ENSG00000231939, ENSG00000233209 11 0.719 0.719 - major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:HGNC:4944]
52. GMNC ENSG00000205835 19 0.711 0.711 - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]
53. GRHL2 ENSG00000083307 19 0.704 0.704 - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
54. SLC13A1 ENSG00000081800 121 0.702 0.702 - solute carrier family 13 member 1 [Source:HGNC Symbol;Acc:HGNC:10916]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA