Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APOBEC3B

Gene Name Gene ID Reads Annotation
APOBEC3B ENSG00000179750 10 apolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]



Genes with expression patterns similar to APOBEC3B

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. APOBEC3B ENSG00000179750 10 2 1.000 1.000 apolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]
2. TMED6 ENSG00000157315 9 1 1.000 - transmembrane p24 trafficking protein 6 [Source:HGNC Symbol;Acc:HGNC:28331]
3. CNPY1 ENSG00000146910 2 1 1.000 - canopy FGF signaling regulator 1 [Source:HGNC Symbol;Acc:HGNC:27786]
4. ACP5 ENSG00000102575 16 1 1.000 - acid phosphatase 5, tartrate resistant [Source:HGNC Symbol;Acc:HGNC:124]
5. C12orf54 ENSG00000177627 2 1 1.000 - chromosome 12 open reading frame 54 [Source:HGNC Symbol;Acc:HGNC:28553]
6. CASP1 ENSG00000137752 8 1 1.000 - caspase 1 [Source:HGNC Symbol;Acc:HGNC:1499]
7. TCL6 ENSG00000187621 1 1 1.000 - T cell leukemia/lymphoma 6 [Source:HGNC Symbol;Acc:HGNC:13463]
8. TTC16 ENSG00000167094 1 1 1.000 - tetratricopeptide repeat domain 16 [Source:HGNC Symbol;Acc:HGNC:26536]
9. STAG3L5P-PVRIG2P-PILRB ENSG00000272752 6 1 1.000 - STAG3L5P-PVRIG2P-PILRB readthrough [Source:HGNC Symbol;Acc:HGNC:48898]
10. LINC01537 ENSG00000227467 5 1 1.000 - long intergenic non-protein coding RNA 1537 [Source:HGNC Symbol;Acc:HGNC:51301]
11. PTPRVP ENSG00000243323 1 1 1.000 - protein tyrosine phosphatase, receptor type V, pseudogene [Source:HGNC Symbol;Acc:HGNC:13421]
12. ERICH5 ENSG00000177459 22 1 1.000 - glutamate rich 5 [Source:HGNC Symbol;Acc:HGNC:26823]
13. TMEM207 ENSG00000198398 3 1 1.000 - transmembrane protein 207 [Source:HGNC Symbol;Acc:HGNC:33705]
14. ST6GALNAC1 ENSG00000070526 15 1 1.000 - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23614]
15. PLA2G5 ENSG00000127472 2 1 1.000 - phospholipase A2 group V [Source:HGNC Symbol;Acc:HGNC:9038]
16. LSAMP-AS1 ENSG00000240922 2 1 1.000 - LSAMP antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40350]
17. NME8 ENSG00000086288 3 1 1.000 - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
18. ANKRD20A11P ENSG00000215559 1 1 1.000 - ankyrin repeat domain 20 family member A11, pseudogene [Source:HGNC Symbol;Acc:HGNC:42024]
19. LINC00612 ENSG00000214851 2 1 1.000 - long intergenic non-protein coding RNA 612 [Source:HGNC Symbol;Acc:HGNC:28621]
20. IL1RL1 ENSG00000115602 17 1 1.000 - interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]
21. TMEM26-AS1 ENSG00000237233 2 1 1.000 - TMEM26 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51209]
22. MS4A3 ENSG00000149516 9 1 1.000 - membrane spanning 4-domains A3 [Source:HGNC Symbol;Acc:HGNC:7317]
23. SFTA2 ENSG00000196260, ENSG00000206465, ENSG00000224246, ENSG00000225454, ENSG00000230072, ENSG00000237814 6 1 1.000 - surfactant associated 2 [Source:HGNC Symbol;Acc:HGNC:18386]
24. PRPF40B ENSG00000110844 10 1 1.000 - pre-mRNA processing factor 40 homolog B [Source:HGNC Symbol;Acc:HGNC:25031]
25. GPX6 ENSG00000198704, ENSG00000281185 3 1 1.000 - glutathione peroxidase 6 [Source:NCBI gene;Acc:257202]
26. HLA-F ENSG00000137403, ENSG00000204642, ENSG00000206509, ENSG00000229698, ENSG00000234487, ENSG00000235220, ENSG00000237508 1 1 1.000 - major histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:HGNC:4963]
27. OR5K3 ENSG00000206536 2 1 1.000 - olfactory receptor family 5 subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:31290]
28. LOC645949 2 1 1.000 - uncharacterized LOC645949
29. C10orf120 ENSG00000183559 2 1 1.000 - chromosome 10 open reading frame 120 [Source:HGNC Symbol;Acc:HGNC:25707]
30. LOC101927082 1 1 1.000 - uncharacterized LOC101927082
31. CECR7 ENSG00000237438 3 1 1.000 - cat eye syndrome chromosome region, candidate 7 [Source:HGNC Symbol;Acc:HGNC:1845]
32. FOXA3 ENSG00000170608 24 1 1.000 - forkhead box A3 [Source:HGNC Symbol;Acc:HGNC:5023]
33. LINC01233 ENSG00000269364 4 1 1.000 - long intergenic non-protein coding RNA 1233 [Source:HGNC Symbol;Acc:HGNC:49756]
34. TMC1 ENSG00000165091 1 1 1.000 - transmembrane channel like 1 [Source:HGNC Symbol;Acc:HGNC:16513]
35. INHBC ENSG00000175189 2 1 1.000 - inhibin subunit beta C [Source:HGNC Symbol;Acc:HGNC:6068]
36. PROC ENSG00000115718 4 1 1.000 - protein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]
37. TEX11 ENSG00000120498 65 1 1.000 - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
38. CHAT ENSG00000070748 1 1 1.000 - choline O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:1912]
39. CTAGE11P ENSG00000214249 8 1 1.000 - CTAGE family member 11, pseudogene [Source:HGNC Symbol;Acc:HGNC:37293]
40. FLJ34503 ENSG00000175967 4 1 1.000 - uncharacterized FLJ34503 [Source:NCBI gene;Acc:285759]
41. LRRIQ3 ENSG00000162620 7 0.943 0.943 - leucine rich repeats and IQ motif containing 3 [Source:HGNC Symbol;Acc:HGNC:28318]
42. OTX2 ENSG00000165588 4 0.9 - 0.900 orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:HGNC:8522]
43. LOC101928035 9 0.9 - 0.900 uncharacterized LOC101928035
44. C6orf222 ENSG00000189325 6 0.897 - 0.897 chromosome 6 open reading frame 222 [Source:HGNC Symbol;Acc:HGNC:33769]
45. CES1P1 ENSG00000228695, ENSG00000281948 17 0.893 - 0.893 carboxylesterase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:18546]
46. BTC ENSG00000174808 5 0.892 - 0.892 betacellulin [Source:HGNC Symbol;Acc:HGNC:1121]
47. FOXE1 ENSG00000178919 8 0.89 - 0.890 forkhead box E1 [Source:HGNC Symbol;Acc:HGNC:3806]
48. IL17F ENSG00000112116 3 0.89 - 0.890 interleukin 17F [Source:HGNC Symbol;Acc:HGNC:16404]
49. TTTY10 ENSG00000229236 4 0.888 - 0.888 testis-specific transcript, Y-linked 10 [Source:HGNC Symbol;Acc:HGNC:18491]
50. BLID ENSG00000259571 4 0.884 - 0.884 BH3-like motif containing, cell death inducer [Source:HGNC Symbol;Acc:HGNC:33495]
51. IL36RN ENSG00000136695 5 0.882 - 0.882 interleukin 36 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:15561]
52. IL23R ENSG00000162594 45 0.88 - 0.880 interleukin 23 receptor [Source:HGNC Symbol;Acc:HGNC:19100]
53. FXYD6-FXYD2 ENSG00000255245 4 0.878 - 0.878 FXYD6-FXYD2 readthrough [Source:HGNC Symbol;Acc:HGNC:39978]
54. DPPA5 ENSG00000203909 8 0.877 - 0.877 developmental pluripotency associated 5 [Source:HGNC Symbol;Acc:HGNC:19201]
55. C10orf55 ENSG00000222047 15 0.874 - 0.874 chromosome 10 open reading frame 55 [Source:HGNC Symbol;Acc:HGNC:31008]
56. MFSD6L ENSG00000185156 10 0.871 0.871 - major facilitator superfamily domain containing 6 like [Source:HGNC Symbol;Acc:HGNC:26656]
57. HOXD11 ENSG00000128713 5 0.87 - 0.870 homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]
58. C11orf21 ENSG00000110665 8 0.867 - 0.867 chromosome 11 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:13231]
59. CLEC4E ENSG00000166523 5 0.859 - 0.859 C-type lectin domain family 4 member E [Source:HGNC Symbol;Acc:HGNC:14555]
60. CRISP1 ENSG00000124812 9 0.858 - 0.858 cysteine rich secretory protein 1 [Source:HGNC Symbol;Acc:HGNC:304]
61. LBX2 ENSG00000179528 16 0.857 - 0.857 ladybird homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15525]
62. CLCNKB ENSG00000184908 10 0.852 - 0.852 chloride voltage-gated channel Kb [Source:HGNC Symbol;Acc:HGNC:2027]
63. PSMC3IP ENSG00000131470 5 0.848 - 0.848 PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
64. LINC00643 ENSG00000186369 29 0.847 0.847 - long intergenic non-protein coding RNA 643 [Source:HGNC Symbol;Acc:HGNC:44296]
65. GRHL2 ENSG00000083307 19 0.846 0.846 - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
66. HOXD10 ENSG00000128710 34 0.844 - 0.844 homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]
67. ACTL10 ENSG00000182584 17 0.843 - 0.843 actin like 10 [Source:HGNC Symbol;Acc:HGNC:16127]
68. FLJ22763 16 0.843 - 0.843 uncharacterized LOC401081
69. LINC01137 ENSG00000233621 17 0.837 - 0.837 long intergenic non-protein coding RNA 1137 [Source:HGNC Symbol;Acc:HGNC:49453]
70. LY6G6D ENSG00000206402, ENSG00000225993, ENSG00000226603, ENSG00000234443, ENSG00000235302, ENSG00000236902, ENSG00000244355 18 0.827 - 0.827 lymphocyte antigen 6 family member G6D [Source:HGNC Symbol;Acc:HGNC:13935]
71. SLC13A1 ENSG00000081800 121 0.816 0.816 - solute carrier family 13 member 1 [Source:HGNC Symbol;Acc:HGNC:10916]
72. C19orf84 ENSG00000262874 39 0.812 - 0.812 chromosome 19 open reading frame 84 [Source:HGNC Symbol;Acc:HGNC:27112]
73. FGD2 ENSG00000146192 18 0.81 - 0.810 FYVE, RhoGEF and PH domain containing 2 [Source:HGNC Symbol;Acc:HGNC:3664]
74. KLK5 ENSG00000167754 17 0.803 - 0.803 kallikrein related peptidase 5 [Source:HGNC Symbol;Acc:HGNC:6366]
75. PROB1 ENSG00000228672 5 0.802 - 0.802 proline rich basic protein 1 [Source:HGNC Symbol;Acc:HGNC:41906]
76. LINC01314 55 0.787 - 0.787 long intergenic non-protein coding RNA 1314
77. HIST1H2BO ENSG00000274641 9 0.785 - 0.785 histone cluster 1 H2B family member o [Source:HGNC Symbol;Acc:HGNC:4758]
78. CD300A ENSG00000167851 21 0.782 - 0.782 CD300a molecule [Source:HGNC Symbol;Acc:HGNC:19319]
79. ACPP ENSG00000014257 86 0.769 0.769 - acid phosphatase, prostate [Source:HGNC Symbol;Acc:HGNC:125]
80. FAIM3 FAIM3 29 0.766 - 0.766
81. COL19A1 ENSG00000082293 18 0.763 - 0.763 collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
82. OR2B6 ENSG00000124657 19 0.762 - 0.762 olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]
83. MCCD1 ENSG00000204511, ENSG00000206447, ENSG00000225228, ENSG00000226841, ENSG00000226923, ENSG00000228662, ENSG00000231975, ENSG00000238238 39 0.76 0.760 - mitochondrial coiled-coil domain 1 [Source:HGNC Symbol;Acc:HGNC:20668]
84. LRRC36 ENSG00000159708 18 0.756 0.756 - leucine rich repeat containing 36 [Source:HGNC Symbol;Acc:HGNC:25615]
85. TMEM61 ENSG00000143001 5 0.747 0.747 - transmembrane protein 61 [Source:HGNC Symbol;Acc:HGNC:27296]
86. LOC100288778 26 0.746 - 0.746 WAS protein family homolog 1 pseudogene
87. LINC00485 ENSG00000258169 12 0.74 - 0.740 long intergenic non-protein coding RNA 485 [Source:HGNC Symbol;Acc:HGNC:27476]
88. SLCO2B1 ENSG00000137491 96 0.736 0.736 - solute carrier organic anion transporter family member 2B1 [Source:HGNC Symbol;Acc:HGNC:10962]
89. MUC20 ENSG00000176945, ENSG00000274843, ENSG00000275430, ENSG00000275501, ENSG00000276583, ENSG00000277753, ENSG00000278114, ENSG00000281630 40 0.736 - 0.736 mucin 20, cell surface associated [Source:HGNC Symbol;Acc:HGNC:23282]
90. LRRC19 ENSG00000184434 19 0.735 - 0.735 leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
91. LOC146513 5 0.734 0.734 - uncharacterized LOC146513
92. THRSP ENSG00000151365 13 0.732 - 0.732 thyroid hormone responsive [Source:HGNC Symbol;Acc:HGNC:11800]
93. PADI2 ENSG00000117115 42 0.729 - 0.729 peptidyl arginine deiminase 2 [Source:HGNC Symbol;Acc:HGNC:18341]
94. GMNC ENSG00000205835 19 0.727 0.727 - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]
95. PLA2G12B ENSG00000138308 33 0.724 0.724 - phospholipase A2 group XIIB [Source:HGNC Symbol;Acc:HGNC:18555]
96. LINC00535 ENSG00000246662 12 0.722 - 0.722 long intergenic non-protein coding RNA 535 [Source:HGNC Symbol;Acc:HGNC:43644]
97. CLPSL1 ENSG00000204140 2 0.717 0.717 - colipase like 1 [Source:HGNC Symbol;Acc:HGNC:21251]
98. TFEC ENSG00000105967 45 0.717 - 0.717 transcription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]
99. LINC01029 ENSG00000265843 9 0.715 - 0.715 long intergenic non-protein coding RNA 1029 [Source:HGNC Symbol;Acc:HGNC:49015]
100. SH2D3A ENSG00000125731 7 0.708 0.708 - SH2 domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16885]

There are 1 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA